>ref|XM_521409.1| PREDICTED: Pan troglodytes similar to tubulin, alpha-like 3
           (LOC466007), mRNA
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 cacagagcacacggactgtac 190
           |||||||||||||||||||||
Sbjct: 756 cacagagcacacggactgtac 776

>ref|NM_024803.1| Homo sapiens tubulin, alpha-like 3 (TUBAL3), mRNA
          Length = 1817

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 cacagagcacacggactgtac 190
           |||||||||||||||||||||
Sbjct: 643 cacagagcacacggactgtac 663

>ref|XM_757388.1| Ustilago maydis 521 hypothetical protein (UM06334.1) partial mRNA
          Length = 3204

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 309  aaggccaatcacaaggccaaggcgc 333
            |||||||| ||||||||||||||||
Sbjct: 2326 aaggccaagcacaaggccaaggcgc 2350

>emb|AL683826.14| Human DNA sequence from clone XXyac-21CG7 on chromosome 10 Contains
             gene FLJ21665, the gene for stresscopin (SPC) (SCP UCN3
             UCNIII) and the 5' end of a ribosomal protein L26 (RPL26)
             pseudogene, complete sequence
          Length = 103752

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 170   cacagagcacacggactgtac 190
             |||||||||||||||||||||
Sbjct: 89727 cacagagcacacggactgtac 89707

>dbj|AK025318.1| Homo sapiens cDNA: FLJ21665 fis, clone COL08913
          Length = 1817

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 cacagagcacacggactgtac 190
           |||||||||||||||||||||
Sbjct: 643 cacagagcacacggactgtac 663

>gb|BC099716.1| Homo sapiens tubulin, alpha-like 3, mRNA (cDNA clone MGC:119349
           IMAGE:40005934), complete cds
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 cacagagcacacggactgtac 190
           |||||||||||||||||||||
Sbjct: 634 cacagagcacacggactgtac 654

>gb|BC105634.1| Homo sapiens tubulin, alpha-like 3, mRNA (cDNA clone MGC:119347
           IMAGE:40005931), complete cds
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 cacagagcacacggactgtac 190
           |||||||||||||||||||||
Sbjct: 634 cacagagcacacggactgtac 654

>gb|BC098247.1| Homo sapiens tubulin, alpha-like 3, mRNA (cDNA clone MGC:119346
           IMAGE:40005930), complete cds
          Length = 1500

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 cacagagcacacggactgtac 190
           |||||||||||||||||||||
Sbjct: 514 cacagagcacacggactgtac 534

>gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 172853

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   caaggccaaggcgccggcag 339
             ||||||||||||||||||||
Sbjct: 55872 caaggccaaggcgccggcag 55853

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     ggcgccggcagcggcaccca 348
               ||||||||||||||||||||
Sbjct: 2419839 ggcgccggcagcggcaccca 2419820

>ref|NM_024299.2| Homo sapiens chromosome 20 open reading frame 149 (C20orf149), mRNA
          Length = 794

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tccctcgccccccttcccacctcc 231
           |||||||||||||| |||||||||
Sbjct: 567 tccctcgcccccctccccacctcc 590

>gb|AC140418.3| Mus musculus BAC clone RP24-418D12 from chromosome 5, complete sequence
          Length = 129709

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     cactcactcactcaatacatgcag 28
             ||||||||||||||| ||||||||
Sbjct: 11950 cactcactcactcaaaacatgcag 11973

>gb|AC104129.4| Homo sapiens BAC clone RP13-596B14 from 7, complete sequence
          Length = 65189

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   ccctcgccccccttcccacc 228
             ||||||||||||||||||||
Sbjct: 40310 ccctcgccccccttcccacc 40329

>gb|BC056416.1| Homo sapiens chromosome 20 open reading frame 149, mRNA (cDNA clone
           MGC:64958 IMAGE:6138381), complete cds
          Length = 860

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tccctcgccccccttcccacctcc 231
           |||||||||||||| |||||||||
Sbjct: 621 tccctcgcccccctccccacctcc 644

>emb|AL121829.30|HSJ697K14 Human DNA sequence from clone RP4-697K14 on chromosome 20 Contains the
             C20orf148 gene for a novel tyrosine kinase, the PTK6 gene
             for protein tyrosine kinase 6, a novel gene, the EEF1A2
             gene for eukaryotic translation elongation factor 1 alpha
             2, the 5' end of the KCNQ2 gene for potassium
             voltage-gated channel (KQT-like subfamily member 2), the
             gene for peroxisomal proliferator-activated receptor A
             interacting complex 285 (PRIC285)(FLJ00244, KIAA1769), the
             C20orf149 gene, the gene for novel protein MGC5356
             (MGC5356), the gene for a novel protein (LOC200213), a
             novel gene and thirteen CpG islands, complete sequence
          Length = 113196

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 208   tccctcgccccccttcccacctcc 231
             |||||||||||||| |||||||||
Sbjct: 50966 tccctcgcccccctccccacctcc 50989

>emb|CR608021.1| full-length cDNA clone CS0DK011YE05 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 661

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tccctcgccccccttcccacctcc 231
           |||||||||||||| |||||||||
Sbjct: 458 tccctcgcccccctccccacctcc 481

>emb|CR594162.1| full-length cDNA clone CS0DJ001YB16 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 746

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tccctcgccccccttcccacctcc 231
           |||||||||||||| |||||||||
Sbjct: 544 tccctcgcccccctccccacctcc 567

>gb|AC162310.7| Mus musculus 10 BAC RP24-225K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 108408

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   caaggccaaggcgccggcag 339
             ||||||||||||||||||||
Sbjct: 78428 caaggccaaggcgccggcag 78447

>gb|AC155833.10| Mus musculus 10 BAC RP24-405O10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 176338

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   caaggccaaggcgccggcag 339
             ||||||||||||||||||||
Sbjct: 27922 caaggccaaggcgccggcag 27941

>dbj|AK024699.1| Homo sapiens cDNA: FLJ21046 fis, clone CAS00193
          Length = 775

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tccctcgccccccttcccacctcc 231
           |||||||||||||| |||||||||
Sbjct: 553 tccctcgcccccctccccacctcc 576

>gb|BC002531.2| Homo sapiens chromosome 20 open reading frame 149, mRNA (cDNA clone
           MGC:2479 IMAGE:3140372), complete cds
          Length = 794

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tccctcgccccccttcccacctcc 231
           |||||||||||||| |||||||||
Sbjct: 567 tccctcgcccccctccccacctcc 590

>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence
          Length = 169072

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     cactcactcactcaatacatgcag 28
             ||||||||||||||| ||||||||
Sbjct: 87375 cactcactcactcaaaacatgcag 87352


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,674,932
Number of Sequences: 3902068
Number of extensions: 2674932
Number of successful extensions: 66674
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66572
Number of HSP's gapped (non-prelim): 102
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)