ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473996.1| Oryza sativa (japonica cultivar-group), predic... 232 6e-58
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 232 6e-58
3emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 232 6e-58
4emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 232 6e-58
5gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide syn... 46 0.069
6gb|CP000264.1| Jannaschia sp. CCS1, complete genome 44 0.27
7gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.27
8dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.27
9gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.1
10gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.1
11gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete se... 42 1.1
12ref|XM_823319.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.1
13emb|CR733572.2|CNS0GSSZ Tetraodon nigroviridis full-length cDNA 42 1.1
14gb|BC033247.1| Homo sapiens myosin XVB pseudogene, mRNA (cDNA cl... 42 1.1
15emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.1
16gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.1
17dbj|AK021565.1| Homo sapiens cDNA FLJ11503 fis, clone HEMBA1002113 42 1.1
18ref|XR_001402.1| PREDICTED: Homo sapiens myosin XVB pseudogene, ... 42 1.1
19ref|XR_000975.1| PREDICTED: Homo sapiens myosin XVB pseudogene, ... 42 1.1
20gb|AC087749.12| Homo sapiens chromosome 17, clone RP11-474I11, c... 42 1.1
21gb|AC119957.9| Mus musculus chromosome 17, clone RP24-466G23, co... 40 4.3
22ref|XM_465758.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
23ref|XM_506805.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.3
24gb|AC005346.1| Homo sapiens chromosome 16, cosmid clone 2H2 (LAN... 40 4.3
25gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
26gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's... 40 4.3
27ref|XM_958316.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.3
28ref|XM_329484.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.3
29gb|AC141886.3| Mus musculus BAC clone RP24-87G24 from chromosome... 40 4.3
30gb|AC158915.4| Mus musculus chromosome 8, clone RP23-146N20, com... 40 4.3
31ref|XM_746258.1| Aspergillus fumigatus Af293 hypothetical protei... 40 4.3
32gb|AC124379.3| Mus musculus BAC clone RP24-399H16 from chromosom... 40 4.3
33gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complet... 40 4.3
34emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromo... 40 4.3
35ref|XM_843715.1| PREDICTED: Canis familiaris similar to CG9164-P... 40 4.3
36gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map ... 40 4.3
37gb|AC006447.24| Mus musculus strain 129/Sv clone ct7-67d14 map 6... 40 4.3
38emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chr... 40 4.3
39emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on ch... 40 4.3
40emb|BX284762.1|NCB13B3 Neurospora crassa DNA linkage group II BA... 40 4.3
41emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on ch... 40 4.3
42gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosom... 40 4.3
43emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot... 40 4.3
44dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 4.3
45gb|AE011734.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.3
46gb|U73631.1|HSU73631 Human or hamster cosmid 130d12, complete se... 40 4.3
47gb|AC021120.6| Homo sapiens BAC clone RP11-347O8 from 4, complet... 40 4.3
48gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.3
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
51dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
53gb|AC121140.7| Mus musculus chromosome 8, clone RP23-429G12, com... 40 4.3
54gb|AC129600.4| Mus musculus BAC clone RP23-361D7 from chromosome... 40 4.3
55gb|AC009065.8| Homo sapiens chromosome 16 clone RP11-304L19, com... 40 4.3
56gb|AY223820.1| Homo sapiens nuclear factor of kappa light polype... 40 4.3
57gb|AC004466.1| Homo sapiens 12 PAC RPCI5-1057I20 (Roswell Park C... 40 4.3
58gb|AC073951.5| Homo sapiens BAC clone RP11-38H6 from 2, complete... 40 4.3
59dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
60dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
61dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
62dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
63gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa li... 40 4.3
64dbj|AK110652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
65dbj|AK099055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
66dbj|AK071953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
67dbj|AK068908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
68gb|AC149285.5| Mus musculus BAC clone RP23-139J2 from 5, complet... 40 4.3
69gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374... 40 4.3
70gb|AC118614.12| Mus musculus chromosome 18, clone RP23-477B20, c... 40 4.3
71gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 4.3
72gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.3
73gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
74gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosom... 40 4.3
75emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.3
76emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.3
77gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, comple... 40 4.3
78gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complet... 40 4.3
79gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone ... 40 4.3
80gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, com... 40 4.3
81emb|AL806518.6| Mouse DNA sequence from clone RP23-25B10 on chro... 40 4.3
82gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
83dbj|D38111.1|WHTTFH1B Wheat gene for transcription factor HBP-1a... 40 4.3 
>ref|XM_473996.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2316

 Score =  232 bits (117), Expect = 6e-58
 Identities = 168/185 (90%)
 Strand = Plus / Plus

                                                                       
Query: 96  cagcacgcccccgcctacacgccagaggcggcgtccgcgtcggccacgggcggcgcgggc 155
           |||||||| || || | |||||| ||||||||||| ||||||||||| ||||| || || 
Sbjct: 10  cagcacgcgccggcgttcacgccggaggcggcgtcggcgtcggccaccggcggggccggg 69

                                                                       
Query: 156 gagcggcacagcctcccggcgctgcaggccaagatgaagcgcgacccggaggggtacgag 215
           |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 70  gagcggcagagcctcccggcgctgcaggcgaagatgaagcgcgacccggaggggtacgag 129

                                                                       
Query: 216 acggagctccgccagctgcagcgccacttcgagtcctcggtgttcctcttccggcagcag 275
             ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 130 gaggagctccgccagctgcggcgccacttcgagtcatcggtgttcctcttccggcagcag 189

                
Query: 276 tcggc 280
            ||||
Sbjct: 190 gcggc 194
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  232 bits (117), Expect = 6e-58
 Identities = 168/185 (90%)
 Strand = Plus / Plus

                                                                            
Query: 96       cagcacgcccccgcctacacgccagaggcggcgtccgcgtcggccacgggcggcgcgggc 155
                |||||||| || || | |||||| ||||||||||| ||||||||||| ||||| || || 
Sbjct: 32077599 cagcacgcgccggcgttcacgccggaggcggcgtcggcgtcggccaccggcggggccggg 32077658

                                                                            
Query: 156      gagcggcacagcctcccggcgctgcaggccaagatgaagcgcgacccggaggggtacgag 215
                |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32077659 gagcggcagagcctcccggcgctgcaggcgaagatgaagcgcgacccggaggggtacgag 32077718

                                                                            
Query: 216      acggagctccgccagctgcagcgccacttcgagtcctcggtgttcctcttccggcagcag 275
                  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 32077719 gaggagctccgccagctgcggcgccacttcgagtcatcggtgttcctcttccggcagcag 32077778

                     
Query: 276      tcggc 280
                 ||||
Sbjct: 32077779 gcggc 32077783
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>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete
             sequence
          Length = 94903

 Score =  232 bits (117), Expect = 6e-58
 Identities = 168/185 (90%)
 Strand = Plus / Plus

                                                                         
Query: 96    cagcacgcccccgcctacacgccagaggcggcgtccgcgtcggccacgggcggcgcgggc 155
             |||||||| || || | |||||| ||||||||||| ||||||||||| ||||| || || 
Sbjct: 50679 cagcacgcgccggcgttcacgccggaggcggcgtcggcgtcggccaccggcggggccggg 50738

                                                                         
Query: 156   gagcggcacagcctcccggcgctgcaggccaagatgaagcgcgacccggaggggtacgag 215
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 50739 gagcggcagagcctcccggcgctgcaggcgaagatgaagcgcgacccggaggggtacgag 50798

                                                                         
Query: 216   acggagctccgccagctgcagcgccacttcgagtcctcggtgttcctcttccggcagcag 275
               ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 50799 gaggagctccgccagctgcggcgccacttcgagtcatcggtgttcctcttccggcagcag 50858

                  
Query: 276   tcggc 280
              ||||
Sbjct: 50859 gcggc 50863
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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score =  232 bits (117), Expect = 6e-58
 Identities = 168/185 (90%)
 Strand = Plus / Plus

                                                                         
Query: 96    cagcacgcccccgcctacacgccagaggcggcgtccgcgtcggccacgggcggcgcgggc 155
             |||||||| || || | |||||| ||||||||||| ||||||||||| ||||| || || 
Sbjct: 98306 cagcacgcgccggcgttcacgccggaggcggcgtcggcgtcggccaccggcggggccggg 98365

                                                                         
Query: 156   gagcggcacagcctcccggcgctgcaggccaagatgaagcgcgacccggaggggtacgag 215
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 98366 gagcggcagagcctcccggcgctgcaggcgaagatgaagcgcgacccggaggggtacgag 98425

                                                                         
Query: 216   acggagctccgccagctgcagcgccacttcgagtcctcggtgttcctcttccggcagcag 275
               ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 98426 gaggagctccgccagctgcggcgccacttcgagtcatcggtgttcctcttccggcagcag 98485

                  
Query: 276   tcggc 280
              ||||
Sbjct: 98486 gcggc 98490
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>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506
            oxidase (fkbO), and FK506 polyketide synthase (fkbB)
            genes, complete cds
          Length = 28732

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 126  gcgtccgcgtcggccacgggcgg 148
            |||||||||||||||||||||||
Sbjct: 3824 gcgtccgcgtcggccacgggcgg 3846
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 179     gcaggccaagatgaagcgcgac 200
               ||||||||||||||||||||||
Sbjct: 1162076 gcaggccaagatgaagcgcgac 1162055
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 145    gcggcgcgggcgagcggcacag 166
              ||||||||||||||||||||||
Sbjct: 110443 gcggcgcgggcgagcggcacag 110464
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 124     cggcgtccgcgtcggccacgggcggcgcgg 153
               ||||||||||||||||  ||||||||||||
Sbjct: 8086325 cggcgtccgcgtcggcggcgggcggcgcgg 8086296



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 130     ccgcgtcggccacgggcggcg 150
               |||||||||||||||||||||
Sbjct: 8127527 ccgcgtcggccacgggcggcg 8127507



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     gaggcggcgtccgcgtcggc 139
               ||||||||||||||||||||
Sbjct: 4067179 gaggcggcgtccgcgtcggc 4067198
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 144     ggcggcgcgggcgagcggcac 164
               |||||||||||||||||||||
Sbjct: 1193588 ggcggcgcgggcgagcggcac 1193568



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 146     cggcgcgggcgagcggcaca 165
               ||||||||||||||||||||
Sbjct: 2763330 cggcgcgggcgagcggcaca 2763349
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 144     ggcggcgcgggcgagcggcac 164
               |||||||||||||||||||||
Sbjct: 2322503 ggcggcgcgggcgagcggcac 2322523



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    cggcgcgggcgagcggcaca 165
              ||||||||||||||||||||
Sbjct: 276955 cggcgcgggcgagcggcaca 276936
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>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence
          Length = 130146

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 124  cggcgtccgcgtcggccacgg 144
            |||||||||||||||||||||
Sbjct: 3513 cggcgtccgcgtcggccacgg 3493
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>ref|XM_823319.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.0810)
           partial mRNA
          Length = 2799

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  cctcccgcggcgatgcgccag 98
           |||||||||||||||||||||
Sbjct: 355 cctcccgcggcgatgcgccag 335
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>emb|CR733572.2|CNS0GSSZ Tetraodon nigroviridis full-length cDNA
          Length = 1413

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 124 cggcgtccgcgtcggccacgg 144
           |||||||||||||||||||||
Sbjct: 732 cggcgtccgcgtcggccacgg 712
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>gb|BC033247.1| Homo sapiens myosin XVB pseudogene, mRNA (cDNA clone IMAGE:5440681),
            with apparent retained intron
          Length = 2821

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 3    acacccctccctccctccgtcccac 27
            |||||||||||||||||| ||||||
Sbjct: 1907 acacccctccctccctccctcccac 1931
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 144     ggcggcgcgggcgagcggcac 164
               |||||||||||||||||||||
Sbjct: 2062588 ggcggcgcgggcgagcggcac 2062568



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cggcgcgggcgagcggcaca 165
             ||||||||||||||||||||
Sbjct: 54267 cggcgcgggcgagcggcaca 54248
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 255     gtgttcctcttccggcagcag 275
               |||||||||||||||||||||
Sbjct: 3502061 gtgttcctcttccggcagcag 3502041
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>dbj|AK021565.1| Homo sapiens cDNA FLJ11503 fis, clone HEMBA1002113
          Length = 1903

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 3    acacccctccctccctccgtcccac 27
            |||||||||||||||||| ||||||
Sbjct: 1007 acacccctccctccctccctcccac 1031
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>ref|XR_001402.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 38
            (MYO15B), misc RNA
          Length = 2808

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 3    acacccctccctccctccgtcccac 27
            |||||||||||||||||| ||||||
Sbjct: 1901 acacccctccctccctccctcccac 1925
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>ref|XR_000975.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 38
            (MYO15B), misc RNA
          Length = 2807

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 3    acacccctccctccctccgtcccac 27
            |||||||||||||||||| ||||||
Sbjct: 1901 acacccctccctccctccctcccac 1925
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>gb|AC087749.12| Homo sapiens chromosome 17, clone RP11-474I11, complete sequence
          Length = 216161

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     acacccctccctccctccgtcccac 27
             |||||||||||||||||| ||||||
Sbjct: 49027 acacccctccctccctccctcccac 49051
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>gb|AC119957.9| Mus musculus chromosome 17, clone RP24-466G23, complete sequence
          Length = 153209

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 26931 cccctccctccctccgtccc 26950
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>ref|XM_465758.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1733

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 cacgccagaggcggcgtccgcgtc 136
           |||||||| |||||||||||||||
Sbjct: 164 cacgccaggggcggcgtccgcgtc 187
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>ref|XM_506805.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0048K16.23
           mRNA
          Length = 1786

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 cacgccagaggcggcgtccgcgtc 136
           |||||||| |||||||||||||||
Sbjct: 217 cacgccaggggcggcgtccgcgtc 240
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>gb|AC005346.1| Homo sapiens chromosome 16, cosmid clone 2H2 (LANL), complete
            sequence
          Length = 38849

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    cccctccctccctccgtccc 25
            ||||||||||||||||||||
Sbjct: 7518 cccctccctccctccgtccc 7499



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    cccctccctccctccgtccc 25
            ||||||||||||||||||||
Sbjct: 7483 cccctccctccctccgtccc 7464
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>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13,
              complete sequence
          Length = 126332

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ctccgccagctgcagcgcca 241
              ||||||||||||||||||||
Sbjct: 117897 ctccgccagctgcagcgcca 117916
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>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230130

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     ccctccctccctccgtccca 26
             ||||||||||||||||||||
Sbjct: 50331 ccctccctccctccgtccca 50350
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>ref|XM_958316.1| Neurospora crassa OR74A hypothetical protein (NCU08439.1) partial
            mRNA
          Length = 4062

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ccggaggggtacgagacgga 220
            ||||||||||||||||||||
Sbjct: 3712 ccggaggggtacgagacgga 3731
to top
>ref|XM_329484.1| Neurospora crassa OR74A hypothetical protein (NCU08439.1) partial
            mRNA
          Length = 4062

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ccggaggggtacgagacgga 220
            ||||||||||||||||||||
Sbjct: 3712 ccggaggggtacgagacgga 3731
to top
>gb|AC141886.3| Mus musculus BAC clone RP24-87G24 from chromosome 7, complete sequence
          Length = 173677

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 98742 cccctccctccctccgtccc 98723
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>gb|AC158915.4| Mus musculus chromosome 8, clone RP23-146N20, complete sequence
          Length = 207367

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      ccctccctccctccgtccca 26
              ||||||||||||||||||||
Sbjct: 189615 ccctccctccctccgtccca 189634
to top
>ref|XM_746258.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g14820) partial
            mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    atacacccctccctccctcc 20
            ||||||||||||||||||||
Sbjct: 1353 atacacccctccctccctcc 1334
to top
>gb|AC124379.3| Mus musculus BAC clone RP24-399H16 from chromosome 7, complete sequence
          Length = 182479

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 71338 cccctccctccctccgtccc 71319
to top
>gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complete sequence
          Length = 186160

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      cccctccctccctccgtccc 25
              ||||||||||||||||||||
Sbjct: 137790 cccctccctccctccgtccc 137809
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>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete
             sequence
          Length = 176646

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ctccctccctccgtcccact 28
             ||||||||||||||||||||
Sbjct: 35786 ctccctccctccgtcccact 35767
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>ref|XM_843715.1| PREDICTED: Canis familiaris similar to CG9164-PA, isoform A
           (LOC607122), mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 cggagctccgccagctgcagcgcc 240
           |||||||||||||||||| |||||
Sbjct: 320 cggagctccgccagctgcggcgcc 343
to top
>gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map 6, complete sequence
          Length = 142777

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 77886 cccctccctccctccgtccc 77867
to top
>gb|AC006447.24| Mus musculus strain 129/Sv clone ct7-67d14 map 6, complete sequence
          Length = 140454

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      cccctccctccctccgtccc 25
              ||||||||||||||||||||
Sbjct: 137183 cccctccctccctccgtccc 137164
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>emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chromosome 9 Contains a CpG
              island, complete sequence
          Length = 143499

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ccctccctccctccgtccca 26
              ||||||||||||||||||||
Sbjct: 115998 ccctccctccctccgtccca 115979
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>emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on chromosome 10 Contains a
             ribosomal protein L29 (RPL29)(HIP,HUMRPL29) pseudogene, a
             CGI-45 protein (CGI-45) pseudogene, a novel pseudogene, a
             pseudogene similar to part of PSME2
             (PA28B,REGbeta,PA28beta) (proteasome (prosome, macropain)
             activator subunit 2 (PA28 beta)) and a CpG island,
             complete sequence
          Length = 176577

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 83820 cccctccctccctccgtccc 83801
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>emb|BX284762.1|NCB13B3 Neurospora crassa DNA linkage group II BAC contig B13B3
          Length = 82584

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ccggaggggtacgagacgga 220
             ||||||||||||||||||||
Sbjct: 33704 ccggaggggtacgagacgga 33723
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>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the
             5' end of the Centb1 gene for centaurin beta 1, the gene
             for a novel protein similar to protein phosphatase 1
             regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the
             Gps2 gene for G protein pathway suppressor 2, the Eif5a
             gene for eukaryotic translation initiation factor 5A, the
             Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute
             carrier family 2 (facilitated glucose transporter) member
             4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7
             gene for claudin 7, the Rai12 gene for retinoic acid
             induced 12, the Dullard gene for Dullard homolog (Xenopus
             laevis) (novel NLI interacting factor-like phosphatase),
             the gene for novel PHD-finger protein JUNE1, the Dvl2 gene
             for dishevelled 2 dsh homolog (Drosophila), the Acadvl
             gene for acyl-Coenzyme A dehydrogenase very long chain,
             the Dlgh4 gene for discs large homolog 4 (Drosophila), the
             Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1
             and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5'
             end of the Mgl2 gene for macrophage galactose
             N-acetyl-galactosamine specific lectin 2 and nine CpG
             islands, complete sequence
          Length = 248203

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ctccctccctccgtcccact 28
             ||||||||||||||||||||
Sbjct: 42901 ctccctccctccgtcccact 42882
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>gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosome 3, complete sequence
          Length = 174425

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 34147 cccctccctccctccgtccc 34166
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>emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot globule-associated
           protein 1 (gap1 gene), strain SAG B 1.85
          Length = 2358

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 ggccacgggcggcgcgggcg 156
           ||||||||||||||||||||
Sbjct: 789 ggccacgggcggcgcgggcg 770
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      cggcggcagcccgaactcct 73
               ||||||||||||||||||||
Sbjct: 3922265 cggcggcagcccgaactcct 3922246
to top
>gb|AE011734.1| Xanthomonas axonopodis pv. citri str. 306,  section 112 of 469 of the
            complete genome
          Length = 10516

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   cggcggcagcccgaactcct 73
            ||||||||||||||||||||
Sbjct: 1959 cggcggcagcccgaactcct 1978
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>gb|U73631.1|HSU73631 Human or hamster cosmid 130d12, complete sequence
          Length = 36385

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    cccctccctccctccgtccc 25
            ||||||||||||||||||||
Sbjct: 5952 cccctccctccctccgtccc 5971
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>gb|AC021120.6| Homo sapiens BAC clone RP11-347O8 from 4, complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ccctccctccctccgtccca 26
             ||||||||||||||||||||
Sbjct: 94446 ccctccctccctccgtccca 94427
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     cggcgtccgcgtcggccacg 143
               ||||||||||||||||||||
Sbjct: 4227109 cggcgtccgcgtcggccacg 4227128
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 120      gaggcggcgtccgcgtcggc 139
                ||||||||||||||||||||
Sbjct: 18923047 gaggcggcgtccgcgtcggc 18923066
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       tcatccccggcggcggcagc 63
                ||||||||||||||||||||
Sbjct: 11341755 tcatccccggcggcggcagc 11341774



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    cggcgtccgcgtcggccacg 143
              ||||||||||||||||||||
Sbjct: 827888 cggcgtccgcgtcggccacg 827869
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     ctccgccagctgcagcgcca 241
               ||||||||||||||||||||
Sbjct: 2285466 ctccgccagctgcagcgcca 2285485
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 113      cacgccagaggcggcgtccgcgtc 136
                |||||||| |||||||||||||||
Sbjct: 17218783 cacgccaggggcggcgtccgcgtc 17218806
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>gb|AC121140.7| Mus musculus chromosome 8, clone RP23-429G12, complete sequence
          Length = 201440

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      ccctccctccctccgtccca 26
              ||||||||||||||||||||
Sbjct: 142686 ccctccctccctccgtccca 142705
to top
>gb|AC129600.4| Mus musculus BAC clone RP23-361D7 from chromosome 5, complete sequence
          Length = 223491

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ccctccctccctccgtccca 26
              ||||||||||||||||||||
Sbjct: 219005 ccctccctccctccgtccca 218986
to top
>gb|AC009065.8| Homo sapiens chromosome 16 clone RP11-304L19, complete sequence
          Length = 199759

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      cccctccctccctccgtccc 25
              ||||||||||||||||||||
Sbjct: 116218 cccctccctccctccgtccc 116199



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      cccctccctccctccgtccc 25
              ||||||||||||||||||||
Sbjct: 116183 cccctccctccctccgtccc 116164
to top
>gb|AY223820.1| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in
             B-cells 1 (p105) (NFKB1) gene, complete cds
          Length = 117359

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     ccctccctccctccgtccca 26
             ||||||||||||||||||||
Sbjct: 65477 ccctccctccctccgtccca 65496
to top
>gb|AC004466.1| Homo sapiens 12 PAC RPCI5-1057I20 (Roswell Park Cancer Institute Human
             PAC library) complete sequence
          Length = 122186

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     ccctccctccctccgtcccactag 30
             |||||||||||||| |||||||||
Sbjct: 69406 ccctccctccctccctcccactag 69429
to top
>gb|AC073951.5| Homo sapiens BAC clone RP11-38H6 from 2, complete sequence
          Length = 165930

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    cccctccctccctccgtccc 25
            ||||||||||||||||||||
Sbjct: 5039 cccctccctccctccgtccc 5020
to top
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541H01
          Length = 157519

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    cggcgtccgcgtcggccacg 143
              ||||||||||||||||||||
Sbjct: 111022 cggcgtccgcgtcggccacg 111003
to top
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0019F11
          Length = 123673

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  cggcgtccgcgtcggccacg 143
            ||||||||||||||||||||
Sbjct: 8783 cggcgtccgcgtcggccacg 8764
to top
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tcatccccggcggcggcagc 63
             ||||||||||||||||||||
Sbjct: 29464 tcatccccggcggcggcagc 29483
to top
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0048K16
          Length = 159891

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   cacgccagaggcggcgtccgcgtc 136
             |||||||| |||||||||||||||
Sbjct: 89550 cacgccaggggcggcgtccgcgtc 89573
to top
>gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in
              B-cells 1 (NFKB1) gene, complete cds
          Length = 190000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      ccctccctccctccgtccca 26
              ||||||||||||||||||||
Sbjct: 130425 ccctccctccctccgtccca 130444
to top
>dbj|AK110652.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-E03, full
           insert sequence
          Length = 1376

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 ctccgccagctgcagcgcca 241
           ||||||||||||||||||||
Sbjct: 903 ctccgccagctgcagcgcca 884
to top
>dbj|AK099055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153D03, full
           insert sequence
          Length = 1732

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 cacgccagaggcggcgtccgcgtc 136
           |||||||| |||||||||||||||
Sbjct: 163 cacgccaggggcggcgtccgcgtc 186
to top
>dbj|AK071953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082E19, full
           insert sequence
          Length = 1785

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 cacgccagaggcggcgtccgcgtc 136
           |||||||| |||||||||||||||
Sbjct: 216 cacgccaggggcggcgtccgcgtc 239
to top
>dbj|AK068908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C02, full
           insert sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 gaggcggcgtccgcgtcggc 139
           ||||||||||||||||||||
Sbjct: 228 gaggcggcgtccgcgtcggc 209
to top
>gb|AC149285.5| Mus musculus BAC clone RP23-139J2 from 5, complete sequence
          Length = 201978

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ccctccctccctccgtccca 26
              ||||||||||||||||||||
Sbjct: 106161 ccctccctccctccgtccca 106142
to top
>gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374_B_16, complete sequence
          Length = 219345

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ccctccctccctccgtccca 26
             ||||||||||||||||||||
Sbjct: 25761 ccctccctccctccgtccca 25742
to top
>gb|AC118614.12| Mus musculus chromosome 18, clone RP23-477B20, complete sequence
          Length = 159912

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      cccctccctccctccgtccc 25
              ||||||||||||||||||||
Sbjct: 104539 cccctccctccctccgtccc 104520
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      cggcggcagcccgaactcct 73
               ||||||||||||||||||||
Sbjct: 3924552 cggcggcagcccgaactcct 3924533
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 40      gcgatcatccccggcggcggcagc 63
               ||||||||| ||||||||||||||
Sbjct: 2620658 gcgatcatctccggcggcggcagc 2620681



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cggcgcgggcgagcggcaca 165
             ||||||||||||||||||||
Sbjct: 52896 cggcgcgggcgagcggcaca 52877
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 120      gaggcggcgtccgcgtcggc 139
                ||||||||||||||||||||
Sbjct: 18849274 gaggcggcgtccgcgtcggc 18849293
to top
>gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosome 3, complete sequence
          Length = 143247

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 45976 cccctccctccctccgtccc 45957
to top
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   gaggcggcgtccgcgtcggc 139
             ||||||||||||||||||||
Sbjct: 47332 gaggcggcgtccgcgtcggc 47313
to top
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   gaggcggcgtccgcgtcggc 139
             ||||||||||||||||||||
Sbjct: 19164 gaggcggcgtccgcgtcggc 19183
to top
>gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, complete sequence
          Length = 177517

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    cccctccctccctccgtccc 25
            ||||||||||||||||||||
Sbjct: 4954 cccctccctccctccgtccc 4935
to top
>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence
          Length = 185272

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    cccctccctccctccgtccc 25
            ||||||||||||||||||||
Sbjct: 3062 cccctccctccctccgtccc 3081
to top
>gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-259j8, complete
              sequence
          Length = 167273

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      cccctccctccctccgtccc 25
              ||||||||||||||||||||
Sbjct: 117903 cccctccctccctccgtccc 117922
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>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence
          Length = 170460

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 43342 cccctccctccctccgtccc 43361
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>emb|AL806518.6| Mouse DNA sequence from clone RP23-25B10 on chromosome 4, complete
             sequence
          Length = 224459

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     cccctccctccctccgtccc 25
             ||||||||||||||||||||
Sbjct: 93158 cccctccctccctccgtccc 93177
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>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03,
             complete sequence
          Length = 107870

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   ctccgccagctgcagcgcca 241
             ||||||||||||||||||||
Sbjct: 13381 ctccgccagctgcagcgcca 13400
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>dbj|D38111.1|WHTTFH1B Wheat gene for transcription factor HBP-1a(17), complete cds
          Length = 7321

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    ccctccctccctccgtccca 26
            ||||||||||||||||||||
Sbjct: 1957 ccctccctccctccgtccca 1976


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,623,149
Number of Sequences: 3902068
Number of extensions: 2623149
Number of successful extensions: 297063
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 294509
Number of HSP's gapped (non-prelim): 2490
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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