Clone Name | bastl14f01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG | 66 | 2e-11 | 2 | YQKA_SCHPO (O74522) Protein C1494.10 in chromosome III | 33 | 0.13 | 3 | CH60_COXBU (P19421) 60 kDa chaperonin (Protein Cpn60) (groEL pro... | 28 | 7.1 |
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>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 66.2 bits (160), Expect = 2e-11 Identities = 29/41 (70%), Positives = 37/41 (90%) Frame = +3 Query: 246 QDSWDADKILDVYIHDYLVKRNLQSTAKAFQAESNLSPDPV 368 Q +W+ADK+LDVYIHDYLVKR+L++TA+AFQAE +S DPV Sbjct: 3 QTNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPV 43
>YQKA_SCHPO (O74522) Protein C1494.10 in chromosome III| Length = 964 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 273 LDVYIHDYLVKRNLQSTAKAFQAESNL 353 LD YI+DY VK N + A+AF ES + Sbjct: 38 LDYYIYDYFVKHNFEEAAQAFLRESKI 64
>CH60_COXBU (P19421) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat| shock protein B) Length = 552 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 341 GLERLRSALQVPLHQVVMDVHIQDLVCVPRILRH 240 G+E R A+ PL Q+V + +Q V ++L H Sbjct: 439 GVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNH 472 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,528,540 Number of Sequences: 219361 Number of extensions: 487498 Number of successful extensions: 1186 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1186 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)