Clone Name | bastl14e10 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 117 bits (59), Expect = 2e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 31145319 gtcctgccgattcaaatgcagaagaaaccataaacacactcaagtatgccaatcgtgcac 31145260 Query: 62 ggaatattcaaaataaagc 80 |||| |||||||||||||| Sbjct: 31145259 ggaacattcaaaataaagc 31145241 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Minus Query: 193 tttcagttgctgcaacaaaaagtctctctacttgagttaaaaatttcagaactttactgt 252 |||||| |||||||||||||||| |||||||||||| |||||| ||||| ||| || | Sbjct: 31144976 tttcagctgctgcaacaaaaagtgtctctacttgagctaaaaaactcagagcttaaccat 31144917 Query: 253 gagctcaaggaaagggaaatgtcttgtgaacagttagcacagcgtgcagttgctgcccag 312 ||||| |||||||||||| |||| | ||||||||| ||||| ||||| |||| |||||| Sbjct: 31144916 gagcttaaggaaagggaattgtcatatgaacagttggcacaaagtgcacttgccgcccag 31144857 Score = 85.7 bits (43), Expect = 9e-14 Identities = 85/99 (85%) Strand = Plus / Minus Query: 94 gacccagttacagcagagatgcaaaaattgaggagtcaagtagagcagctccagagtgaa 153 ||||||||||||||||||||||||||||| |||||||| | |||||| | |||| ||| Sbjct: 31145149 gacccagttacagcagagatgcaaaaattaaggagtcagttggagcagttgcagactgag 31145090 Query: 154 cttctgttttcccgcagtgggggtgcatcactagaagaa 192 || ||||| |||||||||||| |||| | ||||||||| Sbjct: 31145089 ctcctgttctcccgcagtgggagtgctgctctagaagaa 31145051
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 117 bits (59), Expect = 2e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 25162 gtcctgccgattcaaatgcagaagaaaccataaacacactcaagtatgccaatcgtgcac 25103 Query: 62 ggaatattcaaaataaagc 80 |||| |||||||||||||| Sbjct: 25102 ggaacattcaaaataaagc 25084 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Minus Query: 193 tttcagttgctgcaacaaaaagtctctctacttgagttaaaaatttcagaactttactgt 252 |||||| |||||||||||||||| |||||||||||| |||||| ||||| ||| || | Sbjct: 24819 tttcagctgctgcaacaaaaagtgtctctacttgagctaaaaaactcagagcttaaccat 24760 Query: 253 gagctcaaggaaagggaaatgtcttgtgaacagttagcacagcgtgcagttgctgcccag 312 ||||| |||||||||||| |||| | ||||||||| ||||| ||||| |||| |||||| Sbjct: 24759 gagcttaaggaaagggaattgtcatatgaacagttggcacaaagtgcacttgccgcccag 24700 Score = 85.7 bits (43), Expect = 9e-14 Identities = 85/99 (85%) Strand = Plus / Minus Query: 94 gacccagttacagcagagatgcaaaaattgaggagtcaagtagagcagctccagagtgaa 153 ||||||||||||||||||||||||||||| |||||||| | |||||| | |||| ||| Sbjct: 24992 gacccagttacagcagagatgcaaaaattaaggagtcagttggagcagttgcagactgag 24933 Query: 154 cttctgttttcccgcagtgggggtgcatcactagaagaa 192 || ||||| |||||||||||| |||| | ||||||||| Sbjct: 24932 ctcctgttctcccgcagtgggagtgctgctctagaagaa 24894
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 117 bits (59), Expect = 2e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 134543 gtcctgccgattcaaatgcagaagaaaccataaacacactcaagtatgccaatcgtgcac 134484 Query: 62 ggaatattcaaaataaagc 80 |||| |||||||||||||| Sbjct: 134483 ggaacattcaaaataaagc 134465 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Minus Query: 193 tttcagttgctgcaacaaaaagtctctctacttgagttaaaaatttcagaactttactgt 252 |||||| |||||||||||||||| |||||||||||| |||||| ||||| ||| || | Sbjct: 134200 tttcagctgctgcaacaaaaagtgtctctacttgagctaaaaaactcagagcttaaccat 134141 Query: 253 gagctcaaggaaagggaaatgtcttgtgaacagttagcacagcgtgcagttgctgcccag 312 ||||| |||||||||||| |||| | ||||||||| ||||| ||||| |||| |||||| Sbjct: 134140 gagcttaaggaaagggaattgtcatatgaacagttggcacaaagtgcacttgccgcccag 134081 Score = 85.7 bits (43), Expect = 9e-14 Identities = 85/99 (85%) Strand = Plus / Minus Query: 94 gacccagttacagcagagatgcaaaaattgaggagtcaagtagagcagctccagagtgaa 153 ||||||||||||||||||||||||||||| |||||||| | |||||| | |||| ||| Sbjct: 134373 gacccagttacagcagagatgcaaaaattaaggagtcagttggagcagttgcagactgag 134314 Query: 154 cttctgttttcccgcagtgggggtgcatcactagaagaa 192 || ||||| |||||||||||| |||| | ||||||||| Sbjct: 134313 ctcctgttctcccgcagtgggagtgctgctctagaagaa 134275
>ref|NM_125486.2| Arabidopsis thaliana ATP binding / microtubule motor AT5G60930 mRNA, complete cds Length = 3885 Score = 77.8 bits (39), Expect = 2e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 |||| |||||| | ||||| |||||||| ||||||| ||||| || || |||||||| | Sbjct: 1013 gtcccgctgatacaaatgctgaggaaactttaaatacgctcaaatacgcaaatcgtgctc 1072 Query: 62 ggaatattcaaaataaagcagtgatcaacagagacccag 100 | ||||||||||| |||||||||||||| ||||||||| Sbjct: 1073 gcaatattcaaaacaaagcagtgatcaatcgagacccag 1111
>gb|BC077205.1| Xenopus laevis hypothetical protein LOC445847, mRNA (cDNA clone IMAGE:4404532), partial cds Length = 1853 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 24 ggaaaccataaatacactcaagtatgccaatcgtgcacggaatattcaaaataaag 79 ||||||| |||| ||||| || ||||||||||| |||||||||||| ||||||||| Sbjct: 1204 ggaaaccttaaacacacttaaatatgccaatcgggcacggaatattaaaaataaag 1259
>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence Length = 102937 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 ||||||||||| |||||| ||||||||| |||| || | |||||||| |||||||||| Sbjct: 102100 gtcctgctgatattaatgctgaggaaaccctaaacactttaaagtatgcaaatcgtgcac 102159 Query: 62 ggaatattcaaaataa 77 | ||||| |||||||| Sbjct: 102160 gcaatatccaaaataa 102175
>dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSL3 Length = 61634 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 |||| |||||| | ||||| |||||||| ||||||| ||||| || || |||||||| | Sbjct: 31007 gtcccgctgatacaaatgctgaggaaactttaaatacgctcaaatacgcaaatcgtgctc 30948 Query: 62 ggaatattcaaaataaagcagtg 84 | ||||||||||| ||||||||| Sbjct: 30947 gcaatattcaaaacaaagcagtg 30925
>gb|AC146870.3| Xenopus tropicalis clone CH216-139C6, complete sequence Length = 168665 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 gtgggggtgcatcactagaaga 191 |||||||||||||||||||||| Sbjct: 161117 gtgggggtgcatcactagaaga 161096
>gb|AC008505.6| Homo sapiens chromosome 5 clone CTC-445B21, complete sequence Length = 161658 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ttctaatgcagaggaaaccata 33 |||||||||||||||||||||| Sbjct: 66558 ttctaatgcagaggaaaccata 66537
>ref|NM_114884.2| Arabidopsis thaliana KICP-02; ATP binding / microtubule motor AT3G50240 (KICP-02) mRNA, complete cds Length = 3537 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 ctcaagtatgccaatcgtgcacggaatat 68 ||||||||||| |||||||| |||||||| Sbjct: 1209 ctcaagtatgcaaatcgtgctcggaatat 1237
>gb|AC101816.17| Mus musculus chromosome 1, clone RP24-353D23, complete sequence Length = 190313 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 tcaaggaaagggaaatgtcttgtga 281 ||||||||||||||||| ||||||| Sbjct: 61286 tcaaggaaagggaaatggcttgtga 61310
>gb|AC103968.11| Homo sapiens chromosome 15, clone RP11-719C20, complete sequence Length = 162470 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 aagaatttcagttgctgcaac 208 ||||||||||||||||||||| Sbjct: 124143 aagaatttcagttgctgcaac 124163
>emb|Z34527.1|LESSRPSPR L.esculentum (UC82-B) mRNA for 54-kD signal recognition particle (SRP) specific protein Length = 1861 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 cagttgctgcaacaaaaagtc 216 ||||||||||||||||||||| Sbjct: 872 cagttgctgcaacaaaaagtc 892
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1 Length = 111122 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 40 ctcaagtatgccaatcgtgcacggaatat 68 ||||||||||| |||||||| |||||||| Sbjct: 27187 ctcaagtatgcaaatcgtgctcggaatat 27159
>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence Length = 214923 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 tcaaggaaagggaaatgtcttgtga 281 ||||||||||||||||| ||||||| Sbjct: 204963 tcaaggaaagggaaatggcttgtga 204987
>dbj|AB061676.1| Arabidopsis thaliana kicp-02 mRNA for kinesin-related protein, complete cds Length = 3398 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 ctcaagtatgccaatcgtgcacggaatat 68 ||||||||||| |||||||| |||||||| Sbjct: 1216 ctcaagtatgcaaatcgtgctcggaatat 1244
>ref|XM_517925.1| PREDICTED: Pan troglodytes kinesin family member 3A (KIF3A), mRNA Length = 2447 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 915 gtatgccaatcgtgctaagaatattaaaaataaagc 950
>gb|AC156548.13| Mus musculus chromosome 5, clone RP23-412C8, complete sequence Length = 197890 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tacagcagagatgcaaaaat 121 |||||||||||||||||||| Sbjct: 139965 tacagcagagatgcaaaaat 139946
>gb|AC004237.1| Homo sapiens chromosome 5, P1 clone 565a12 (LBNL H23), complete sequence Length = 38715 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 29305 gtatgccaatcgtgctaagaatattaaaaataaagc 29340
>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence Length = 198036 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cccagttacagcagagatgc 115 |||||||||||||||||||| Sbjct: 37262 cccagttacagcagagatgc 37243
>gb|BC045542.1| Homo sapiens kinesin family member 3A, mRNA (cDNA clone MGC:57178 IMAGE:5298675), complete cds Length = 3292 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1164 gtatgccaatcgtgctaagaatattaaaaataaagc 1199
>ref|NM_007054.5| Homo sapiens kinesin family member 3A (KIF3A), mRNA Length = 6257 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1165 gtatgccaatcgtgctaagaatattaaaaataaagc 1200
>emb|CR524826.13| Zebrafish DNA sequence from clone CH211-227A6 in linkage group 16, complete sequence Length = 136920 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 caacaaaaagtctctctacttgag 228 ||||||||| |||||||||||||| Sbjct: 119470 caacaaaaattctctctacttgag 119493
>gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome 5, complete sequence Length = 173603 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cccagttacagcagagatgc 115 |||||||||||||||||||| Sbjct: 172327 cccagttacagcagagatgc 172308
>gb|BC032599.1| Homo sapiens kinesin family member 3A, mRNA (cDNA clone IMAGE:5533541), containing frame-shift errors Length = 1367 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1153 gtatgccaatcgtgctaagaatattaaaaataaagc 1188
>gb|BC020890.1| Homo sapiens kinesin family member 3A, mRNA (cDNA clone IMAGE:4693968), containing frame-shift errors Length = 1443 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1135 gtatgccaatcgtgctaagaatattaaaaataaagc 1170
>gb|AC163219.3| Mus musculus chromosome 5, clone RP24-155K17, complete sequence Length = 156494 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tacagcagagatgcaaaaat 121 |||||||||||||||||||| Sbjct: 53591 tacagcagagatgcaaaaat 53572
>gb|AC137824.25| Medicago truncatula clone mth2-10l10, complete sequence Length = 114536 Score = 40.1 bits (20), Expect = 4.6 Identities = 62/76 (81%) Strand = Plus / Plus Query: 2 gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61 |||||||||| |||||| ||||||||| | || || | |||||||| |||||||||| Sbjct: 108079 gtcctgctgacattaatgccgaggaaaccctcaacactttgaagtatgcaaatcgtgcac 108138 Query: 62 ggaatattcaaaataa 77 | ||||| | |||||| Sbjct: 108139 gcaatatccgaaataa 108154
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 agagtgaacttctgttttcc 165 |||||||||||||||||||| Sbjct: 24030 agagtgaacttctgttttcc 24049
>emb|CR861275.1| Pongo pygmaeus mRNA; cDNA DKFZp459M153 (from clone DKFZp459M153) Length = 3273 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1159 gtatgccaatcgtgctaagaatattaaaaataaagc 1194
>emb|CR621012.1| full-length cDNA clone CS0DJ015YJ21 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2269 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1168 gtatgccaatcgtgctaagaatattaaaaataaagc 1203
>emb|BX890611.8| Zebrafish DNA sequence from clone DKEYP-86H10, complete sequence Length = 181642 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 caacaaaaagtctctctacttgag 228 ||||||||| |||||||||||||| Sbjct: 24206 caacaaaaattctctctacttgag 24229
>gb|AC157216.2| Pan troglodytes BAC clone CH251-66E23 from chromosome unknown, complete sequence Length = 165669 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 31193 gtatgccaatcgtgctaagaatattaaaaataaagc 31228
>dbj|AB169362.1| Macaca fascicularis testis cDNA, clone: QtsA-19288, similar to human kinesin family member 3A (KIF3A), mRNA, RefSeq: NM_007054.4 Length = 2291 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1128 gtatgccaatcgtgctaagaatattaaaaataaagc 1163
>gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E22, complete sequence Length = 165916 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 gattctaatgcagaggaaac 29 |||||||||||||||||||| Sbjct: 29589 gattctaatgcagaggaaac 29608
>gb|AC073632.4| Homo sapiens BAC clone RP11-202H24 from 2, complete sequence Length = 40132 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 agaatttcagttgctgcaacaaaaagtc 216 ||||||||| |||||| ||||||||||| Sbjct: 28505 agaatttcatttgctgaaacaaaaagtc 28478
>gb|BC039592.1| Homo sapiens, clone IMAGE:5403936, mRNA, partial cds Length = 1342 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1127 gtatgccaatcgtgctaagaatattaaaaataaagc 1162
>gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, complete sequence Length = 217234 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tttcagttgctgcaacaaaa 212 |||||||||||||||||||| Sbjct: 115506 tttcagttgctgcaacaaaa 115525
>gb|AC171678.8| Mus musculus chromosome 8, clone RP24-104E12, complete sequence Length = 175681 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tttcagttgctgcaacaaaa 212 |||||||||||||||||||| Sbjct: 24437 tttcagttgctgcaacaaaa 24456
>gb|AF041853.1|AF041853 Homo sapiens kinesin family member protein KIF3A mRNA, complete cds Length = 2109 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1011 gtatgccaatcgtgctaagaatattaaaaataaagc 1046
>emb|AM177178.1| Homo sapiens mRNA for kinesin-like protein KIF3Abeta (KIF3A gene) Length = 2178 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1011 gtatgccaatcgtgctaagaatattaaaaataaagc 1046
>gb|AC161596.2| Mus musculus BAC clone RP23-477K6 from chromosome 9, complete sequence Length = 187832 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tttcagttgctgcaacaaaa 212 |||||||||||||||||||| Sbjct: 113224 tttcagttgctgcaacaaaa 113205
>dbj|AB209780.1| Homo sapiens mRNA for Kinesin-like protein KIF3A variant protein Length = 2573 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 gtatgccaatcgtgcacggaatattcaaaataaagc 80 ||||||||||||||| ||||||| |||||||||| Sbjct: 1118 gtatgccaatcgtgctaagaatattaaaaataaagc 1153
>emb|AL772224.2| Mouse DNA sequence from clone RP23-131N18 on chromosome 2, complete sequence Length = 182544 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 acttgagttaaaaatttcagaact 245 ||||||||| |||||||||||||| Sbjct: 30164 acttgagtttaaaatttcagaact 30187
>emb|AL133401.16| Mouse DNA sequence from clone RP21-72L18 on chromosome 5, complete sequence Length = 158344 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tacagcagagatgcaaaaat 121 |||||||||||||||||||| Sbjct: 89868 tacagcagagatgcaaaaat 89849 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,984,797 Number of Sequences: 3902068 Number of extensions: 3984797 Number of successful extensions: 76866 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 76769 Number of HSP's gapped (non-prelim): 98 length of query: 348 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 326 effective length of database: 17,147,199,772 effective search space: 5589987125672 effective search space used: 5589987125672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)