ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
2gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome... 254 2e-64
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 254 2e-64
4emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 42 1.5
5gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, co... 42 1.5
6emb|AL954231.3|PTB144O12 Pan troglodytes chromosome 22 BAC PTB-1... 42 1.5
7emb|AL954232.2|RP43039B12 Pan troglodytes chromosome 22 BAC RP43... 42 1.5
8emb|AL954230.2|RP43035C13 Pan troglodytes chromosome 22 BAC RP43... 42 1.5
9gb|AF064865.1|AF064865 Homo sapiens chromosome 21q22.3 PAC 58D10... 42 1.5
10emb|AL671117.6| Mouse DNA sequence from clone RP23-278L4 on chro... 42 1.5
11ref|XM_511900.1| PREDICTED: Pan troglodytes similar to coilin; c... 40 5.8
12gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Ho... 40 5.8
13ref|NM_002851.2| Homo sapiens protein tyrosine phosphatase, rece... 40 5.8
14gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 5.8
15ref|XM_677585.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.8
16gb|AC144938.3| Mus musculus BAC clone RP24-129H18 from chromosom... 40 5.8
17gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hosp... 40 5.8
18gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, comple... 40 5.8
19emb|CR383668.12| Zebrafish DNA sequence from clone DKEY-199M13 i... 40 5.8
20emb|BX649638.19| Zebrafish DNA sequence from clone CH211-64M24 i... 40 5.8
21gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Canc... 40 5.8
22emb|BX855613.7| Zebrafish DNA sequence from clone CH211-208F21 i... 40 5.8
23dbj|AK170058.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.8
24gb|AC153142.3| Mus musculus BAC clone RP23-296H17 from chromosom... 40 5.8
25gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6... 40 5.8
26gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 5.8
27gb|AC104753.10| Mus musculus chromosome 7, clone RP24-168P9, com... 40 5.8
28emb|CR388051.22| Zebrafish DNA sequence from clone CH211-239B6 i... 40 5.8
29gb|U88967.1|HSU88967 Human tyrosine phosphatase zeta polypeptide... 40 5.8
30gb|AC058786.24| Mus musculus strain C57BL/6J chromosome 4 clone ... 40 5.8
31gb|U75347.1|ENU75347 Emericella nidulans fatty acid synthase, al... 40 5.8
32gb|M93426.1|HUMPTPRZ Human protein tyrosine phosphatase zeta-pol... 40 5.8
33emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chr... 40 5.8 
>dbj|AK072244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003F07, full
            insert sequence
          Length = 3941

 Score =  422 bits (213), Expect = e-115
 Identities = 373/425 (87%), Gaps = 1/425 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    acaaatggcttgggcatggttcagggtggtcgcttaagtgcactcatcagggatacaagc 62
            |||||||| | ||| |||||||| |||||||||||||||||||| ||||| ||||  |||
Sbjct: 782  acaaatgggtcgggtatggttcaaggtggtcgcttaagtgcactgatcagagataatagc 841

                                                                        
Query: 63   agtgaacctcaaactggaaactgcatttccaccccaacagttgttcgcttctactctttg 122
            |||||| ||| || |||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 842  agtgaaactccaaatggaaattgcatttctactccaacagttgttcgcttctactctttg 901

                                                                        
Query: 123  aagtctcacacatatgtacatgttctcagattccgatctgccgtatatatagttcgttgc 182
            ||||||||| |||||||||||||||| ||||| || |||||||||||||||||||| |||
Sbjct: 902  aagtctcactcatatgtacatgttctgagatttcggtctgccgtatatatagttcgctgc 961

                                                                        
Query: 183  agcccccgggttgtggctgtagcacttgcagcacaaatctactgctttgatgctgtaact 242
            ||||||||| |||| |||||||| |||||||||||| | ||||||||||||||||| || 
Sbjct: 962  agcccccggattgtagctgtagctcttgcagcacaagtatactgctttgatgctgtgacc 1021

                                                                        
Query: 243  cttgagaacaagctcagtgtcctgtcttatcctttacaaggggcacctggggcaaacatt 302
            |||||||| ||| |||||||| || | |||||||| |||||||||||||||  ||| |||
Sbjct: 1022 cttgagaataagttcagtgtcttgacatatcctttgcaaggggcacctgggataaatatt 1081

                                                                        
Query: 303  gggtatggtccaatgtctgttggttcaaggtggttagcttatgc-tcccatggtcctgta 361
            |||||||| |||||| |||||||  ||||||||||||||||||| ||| || | ||| ||
Sbjct: 1082 gggtatggcccaatggctgttggcccaaggtggttagcttatgcttccaatagcccttta 1141

                                                                        
Query: 362  ttatcaagcactggtcgtctgagcccacagaacctcacgccttctccaggagtgagccca 421
            ||||||||||| || ||||| || ||||||||||| || || ||||||||||| ||||||
Sbjct: 1142 ttatcaagcacaggccgtctaagtccacagaaccttacaccatctccaggagttagccca 1201

                 
Query: 422  tctac 426
            |||||
Sbjct: 1202 tctac 1206
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>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
             complete sequence
          Length = 102567

 Score =  254 bits (128), Expect = 2e-64
 Identities = 194/216 (89%)
 Strand = Plus / Plus

                                                                         
Query: 3     acaaatggcttgggcatggttcagggtggtcgcttaagtgcactcatcagggatacaagc 62
             |||||||| | ||| |||||||| |||||||||||||||||||| ||||| ||||  |||
Sbjct: 86054 acaaatgggtcgggtatggttcaaggtggtcgcttaagtgcactgatcagagataatagc 86113

                                                                         
Query: 63    agtgaacctcaaactggaaactgcatttccaccccaacagttgttcgcttctactctttg 122
             |||||| ||| || |||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 86114 agtgaaactccaaatggaaattgcatttctactccaacagttgttcgcttctactctttg 86173

                                                                         
Query: 123   aagtctcacacatatgtacatgttctcagattccgatctgccgtatatatagttcgttgc 182
             ||||||||| |||||||||||||||| ||||| || |||||||||||||||||||| |||
Sbjct: 86174 aagtctcactcatatgtacatgttctgagatttcggtctgccgtatatatagttcgctgc 86233

                                                 
Query: 183   agcccccgggttgtggctgtagcacttgcagcacaa 218
             ||||||||| |||| |||||||| ||||||||||||
Sbjct: 86234 agcccccggattgtagctgtagctcttgcagcacaa 86269



 Score =  178 bits (90), Expect = 1e-41
 Identities = 178/206 (86%), Gaps = 1/206 (0%)
 Strand = Plus / Plus

                                                                         
Query: 222   tactgctttgatgctgtaactcttgagaacaagctcagtgtcctgtcttatcctttacaa 281
             ||||||||||||||||| || |||||||| ||| |||||||| || | |||||||| |||
Sbjct: 86373 tactgctttgatgctgtgacccttgagaataagttcagtgtcttgacatatcctttgcaa 86432

                                                                         
Query: 282   ggggcacctggggcaaacattgggtatggtccaatgtctgttggttcaaggtggttagct 341
             ||||||||||||  ||| ||||||||||| |||||| |||||||  ||||||||||||||
Sbjct: 86433 ggggcacctgggataaatattgggtatggcccaatggctgttggcccaaggtggttagct 86492

                                                                         
Query: 342   tatgc-tcccatggtcctgtattatcaagcactggtcgtctgagcccacagaacctcacg 400
             ||||| ||| || | ||| ||||||||||||| || ||||| || ||||||||||| || 
Sbjct: 86493 tatgcttccaatagccctttattatcaagcacaggccgtctaagtccacagaaccttaca 86552

                                       
Query: 401   ccttctccaggagtgagcccatctac 426
             || ||||||||||| |||||||||||
Sbjct: 86553 ccatctccaggagttagcccatctac 86578
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  254 bits (128), Expect = 2e-64
 Identities = 194/216 (89%)
 Strand = Plus / Plus

                                                                            
Query: 3        acaaatggcttgggcatggttcagggtggtcgcttaagtgcactcatcagggatacaagc 62
                |||||||| | ||| |||||||| |||||||||||||||||||| ||||| ||||  |||
Sbjct: 19626155 acaaatgggtcgggtatggttcaaggtggtcgcttaagtgcactgatcagagataatagc 19626214

                                                                            
Query: 63       agtgaacctcaaactggaaactgcatttccaccccaacagttgttcgcttctactctttg 122
                |||||| ||| || |||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 19626215 agtgaaactccaaatggaaattgcatttctactccaacagttgttcgcttctactctttg 19626274

                                                                            
Query: 123      aagtctcacacatatgtacatgttctcagattccgatctgccgtatatatagttcgttgc 182
                ||||||||| |||||||||||||||| ||||| || |||||||||||||||||||| |||
Sbjct: 19626275 aagtctcactcatatgtacatgttctgagatttcggtctgccgtatatatagttcgctgc 19626334

                                                    
Query: 183      agcccccgggttgtggctgtagcacttgcagcacaa 218
                ||||||||| |||| |||||||| ||||||||||||
Sbjct: 19626335 agcccccggattgtagctgtagctcttgcagcacaa 19626370



 Score =  178 bits (90), Expect = 1e-41
 Identities = 178/206 (86%), Gaps = 1/206 (0%)
 Strand = Plus / Plus

                                                                            
Query: 222      tactgctttgatgctgtaactcttgagaacaagctcagtgtcctgtcttatcctttacaa 281
                ||||||||||||||||| || |||||||| ||| |||||||| || | |||||||| |||
Sbjct: 19626474 tactgctttgatgctgtgacccttgagaataagttcagtgtcttgacatatcctttgcaa 19626533

                                                                            
Query: 282      ggggcacctggggcaaacattgggtatggtccaatgtctgttggttcaaggtggttagct 341
                ||||||||||||  ||| ||||||||||| |||||| |||||||  ||||||||||||||
Sbjct: 19626534 ggggcacctgggataaatattgggtatggcccaatggctgttggcccaaggtggttagct 19626593

                                                                            
Query: 342      tatgc-tcccatggtcctgtattatcaagcactggtcgtctgagcccacagaacctcacg 400
                ||||| ||| || | ||| ||||||||||||| || ||||| || ||||||||||| || 
Sbjct: 19626594 tatgcttccaatagccctttattatcaagcacaggccgtctaagtccacagaaccttaca 19626653

                                          
Query: 401      ccttctccaggagtgagcccatctac 426
                || ||||||||||| |||||||||||
Sbjct: 19626654 ccatctccaggagttagcccatctac 19626679
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>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 379   tctgagcccacagaacctcac 399
             |||||||||||||||||||||
Sbjct: 34325 tctgagcccacagaacctcac 34305
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>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence
          Length = 167258

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 77    tggaaactgcatttccacccc 97
             |||||||||||||||||||||
Sbjct: 73069 tggaaactgcatttccacccc 73089
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>emb|AL954231.3|PTB144O12 Pan troglodytes chromosome 22 BAC PTB-144O12, complete sequence
          Length = 180638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    tctgagcccacagaacctcac 399
              |||||||||||||||||||||
Sbjct: 104516 tctgagcccacagaacctcac 104496
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>emb|AL954232.2|RP43039B12 Pan troglodytes chromosome 22 BAC RP43-039B12, complete sequence
          Length = 201761

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    tctgagcccacagaacctcac 399
              |||||||||||||||||||||
Sbjct: 112729 tctgagcccacagaacctcac 112709
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>emb|AL954230.2|RP43035C13 Pan troglodytes chromosome 22 BAC RP43-035C13, complete sequence
          Length = 157305

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    tctgagcccacagaacctcac 399
              |||||||||||||||||||||
Sbjct: 146299 tctgagcccacagaacctcac 146279
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>gb|AF064865.1|AF064865 Homo sapiens chromosome 21q22.3 PAC 58D10, complete sequence
          Length = 159424

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    tctgagcccacagaacctcac 399
              |||||||||||||||||||||
Sbjct: 137958 tctgagcccacagaacctcac 137938
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>emb|AL671117.6| Mouse DNA sequence from clone RP23-278L4 on chromosome X, complete
              sequence
          Length = 209799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 62     cagtgaacctcaaactggaaactgcattt 90
              |||||||||||| | ||||||||||||||
Sbjct: 122886 cagtgaacctcacagtggaaactgcattt 122914
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>ref|XM_511900.1| PREDICTED: Pan troglodytes similar to coilin; coilin p80
           (LOC455147), mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 atcaagcactggtcgtctga 383
           ||||||||||||||||||||
Sbjct: 207 atcaagcactggtcgtctga 188
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>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 238466

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   ttgagaacaagctcagtgtcctgt 267
             |||||||||||||| |||||||||
Sbjct: 95914 ttgagaacaagctctgtgtcctgt 95937
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>ref|NM_002851.2| Homo sapiens protein tyrosine phosphatase, receptor-type, Z
           polypeptide 1 (PTPRZ1), mRNA
          Length = 8169

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 caaatctactgctttgatgc 235
           ||||||||||||||||||||
Sbjct: 855 caaatctactgctttgatgc 874
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>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete
             sequence
          Length = 166751

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   ttgagaacaagctcagtgtcctgt 267
             |||||||||||||| |||||||||
Sbjct: 91480 ttgagaacaagctctgtgtcctgt 91503
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>ref|XM_677585.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9408.2), mRNA
          Length = 6282

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 191 ggttgtggctgtagcacttgcagc 214
           |||||||||||||||| |||||||
Sbjct: 900 ggttgtggctgtagcaattgcagc 877
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>gb|AC144938.3| Mus musculus BAC clone RP24-129H18 from chromosome 18, complete sequence
          Length = 207182

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    caagctcagtgtcctgtcttatcc 274
              |||||||||| |||||||||||||
Sbjct: 135819 caagctcagtctcctgtcttatcc 135796
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>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 224326

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 244  ttgagaacaagctcagtgtcctgt 267
            |||||||||||||| |||||||||
Sbjct: 8425 ttgagaacaagctctgtgtcctgt 8448
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>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence
          Length = 70276

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   caaatctactgctttgatgc 235
             ||||||||||||||||||||
Sbjct: 32207 caaatctactgctttgatgc 32226
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>emb|CR383668.12| Zebrafish DNA sequence from clone DKEY-199M13 in linkage group 3,
             complete sequence
          Length = 228685

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   atggtcctgtattatcaagc 370
             ||||||||||||||||||||
Sbjct: 38683 atggtcctgtattatcaagc 38664
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>emb|BX649638.19| Zebrafish DNA sequence from clone CH211-64M24 in linkage group 18,
             complete sequence
          Length = 185541

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   atggtcctgtattatcaagc 370
             ||||||||||||||||||||
Sbjct: 11501 atggtcctgtattatcaagc 11482
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>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 231946

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    ttgagaacaagctcagtgtcctgt 267
              |||||||||||||| |||||||||
Sbjct: 222991 ttgagaacaagctctgtgtcctgt 223014
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>emb|BX855613.7| Zebrafish DNA sequence from clone CH211-208F21 in linkage group 14,
              complete sequence
          Length = 201273

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    atggtcctgtattatcaagc 370
              ||||||||||||||||||||
Sbjct: 118020 atggtcctgtattatcaagc 118001
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>dbj|AK170058.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630013J10 product:WD
            repeat domain 11, full insert sequence
          Length = 4992

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  ccaggagtgagcccatctac 426
            ||||||||||||||||||||
Sbjct: 2810 ccaggagtgagcccatctac 2791
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>gb|AC153142.3| Mus musculus BAC clone RP23-296H17 from chromosome 18, complete
             sequence
          Length = 212451

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 251   caagctcagtgtcctgtcttatcc 274
             |||||||||| |||||||||||||
Sbjct: 26826 caagctcagtctcctgtcttatcc 26849
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>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete
             sequence
          Length = 230839

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   ttgagaacaagctcagtgtcctgt 267
             |||||||||||||| |||||||||
Sbjct: 40861 ttgagaacaagctctgtgtcctgt 40884
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    ttgagaacaagctcagtgtcctgt 267
              |||||||||||||| |||||||||
Sbjct: 919818 ttgagaacaagctctgtgtcctgt 919841
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>gb|AC104753.10| Mus musculus chromosome 7, clone RP24-168P9, complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    ccaggagtgagcccatctac 426
              ||||||||||||||||||||
Sbjct: 128040 ccaggagtgagcccatctac 128021
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>emb|CR388051.22| Zebrafish DNA sequence from clone CH211-239B6 in linkage group 15,
             complete sequence
          Length = 120027

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   atggtcctgtattatcaagc 370
             ||||||||||||||||||||
Sbjct: 14694 atggtcctgtattatcaagc 14713
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>gb|U88967.1|HSU88967 Human tyrosine phosphatase zeta polypeptide 2 (HTPZP2) mRNA,
           partial cds
          Length = 3350

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 caaatctactgctttgatgc 235
           ||||||||||||||||||||
Sbjct: 795 caaatctactgctttgatgc 814
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>gb|AC058786.24| Mus musculus strain C57BL/6J chromosome 4 clone rp23-117o7, complete
             sequence
          Length = 209737

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   caggagtgagcccatctacttctc 431
             ||||| ||||||||||||||||||
Sbjct: 76628 caggaatgagcccatctacttctc 76605
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>gb|U75347.1|ENU75347 Emericella nidulans fatty acid synthase, alpha (fasA) and beta (fasB)
            subunit genes, complete cds
          Length = 13742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 191  ggttgtggctgtagcacttgcagc 214
            |||||||||||||||| |||||||
Sbjct: 8224 ggttgtggctgtagcaattgcagc 8201
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>gb|M93426.1|HUMPTPRZ Human protein tyrosine phosphatase zeta-polypeptide (PTPRZ) mRNA,
           complete cds
          Length = 7941

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 caaatctactgctttgatgc 235
           ||||||||||||||||||||
Sbjct: 607 caaatctactgctttgatgc 626
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>emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chromosome 4, complete
             sequence
          Length = 194554

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   caggagtgagcccatctacttctc 431
             ||||| ||||||||||||||||||
Sbjct: 29479 caggaatgagcccatctacttctc 29502


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,343,466
Number of Sequences: 3902068
Number of extensions: 3343466
Number of successful extensions: 60915
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60826
Number of HSP's gapped (non-prelim): 85
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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