>XLNR_ASPNG (O42804) Transcriptional activator xlnR|
          Length = 875

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 354 PAWVPLPAPWPCDWPS 307
           P W+PLP+P P ++PS
Sbjct: 268 PGWLPLPSPSPANFPS 283

>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
            (Proline-rich synapse associated protein 2) (ProSAP2)
            (SPANK-2)
          Length = 1815

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 378  TPAGTRTRPAWVPLPAPWPCDWPSRLRRR 292
            +PA +   PAW+P+PA    + P+R  R+
Sbjct: 1235 SPAFSPRSPAWIPVPARREAEKPTREERK 1263

>PELB_COLGL (O59939) Pectate lyase B precursor (EC 4.2.2.2)|
          Length = 331

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 354 PAWVPLPAPWPCDWPSRLRRR 292
           P+W+PLPAP P   PS  RRR
Sbjct: 11  PSWLPLPAP-PPPLPSVTRRR 30

>RGMC_HUMAN (Q6ZVN8) Hemojuvelin precursor (Hemochromatosis type 2 protein)|
           (RGM domain family member C)
          Length = 426

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 375 PAGTRTRPAWVPLPAPWPCDWPSRLRRRH 289
           P G     A   LPAP PCD+  R  R H
Sbjct: 130 PRGPALPGAGSGLPAPDPCDYEGRFSRLH 158

>LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein) (Warts-like kinase)
          Length = 1088

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 360 TRPAWVPLPAPWPCDWPS 307
           + PAWVP PAP P   P+
Sbjct: 461 SHPAWVPAPAPAPAPAPA 478

>Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor|
          Length = 544

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = -2

Query: 192 SYSPCALCSSNVAGSTSTPGERAGADRE*D*GGCNDAS-------NEGGERERG 52
           S S  A  SS+ + S+S+    AG D E D GG +  S       + GG+ E G
Sbjct: 30  SSSGNASSSSSSSSSSSSSSSAAGGDGEGDGGGADSGSASDSGSGSSGGKEEHG 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,182,492
Number of Sequences: 219361
Number of extensions: 462048
Number of successful extensions: 1696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)