ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14d10 |
|---|---|
| Clone Library Name | barley_pub |
>SND1_BRARE (Q7ZT42) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (4SNc-Tudor domain protein) Length = 897 Score = 90.5 bits (223), Expect = 2e-18 Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 13/138 (9%) Frame = +2 Query: 50 IMASNTGASGWLRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRG----- 214 + +S A RG VK V SG +++ G + PPE+ I LS + A LARR Sbjct: 9 VQSSQASAPQLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGALARRAIQGQP 68 Query: 215 ----GVDEPFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNVAYLV 370 DEP+A+++REF+RK +GKEV F V+ P GRE+G VYLG +N+A + Sbjct: 69 DTKDTPDEPWAFQAREFMRKKVIGKEVCFTVENKTPQ-GREYGMVYLGKDTSGENIAESL 127 Query: 371 VAAGWARVKEQGPKGGEP 424 VA G A V+ +G +G P Sbjct: 128 VAEGLAMVRREGIRGNNP 145 Score = 44.7 bits (104), Expect = 1e-04 Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 22/123 (17%) Frame = +2 Query: 92 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR-----------RGGVDEPFAW 238 KV V + D +++ K K+I LS + PRL R D P+ + Sbjct: 347 KVMQVVNADAIVV----KLNSGEYKTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIPYMF 402 Query: 239 ESREFLRKLCVGKEVTFRVDY-----TAPNIG------REFGTVYLGDKNVAYLVVAAGW 385 E+REFLRK +GK+V VDY A +G R TV +G N+A +V+ G Sbjct: 403 EAREFLRKKLIGKKVNVTVDYIRAATNAMEMGVPAFPERTCATVTIGGINIAEALVSKGL 462 Query: 386 ARV 394 A V Sbjct: 463 ATV 465
>SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 83.2 bits (204), Expect = 3e-16 Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 13/126 (10%) Frame = +2 Query: 86 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGV---------DEPFAW 238 RG VK V SG +++ G + PPE+ I LS + A LARR V DEP+A+ Sbjct: 21 RGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWAF 80 Query: 239 ESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNVAYLVVAAGWARVKEQG 406 +REFLRK +GKEV F ++ P GRE+G +YLG +N+A +VA G A + +G Sbjct: 81 PAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREG 138 Query: 407 PKGGEP 424 + P Sbjct: 139 MRANNP 144 Score = 46.2 bits (108), Expect = 3e-05 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 20/121 (16%) Frame = +2 Query: 92 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDE----------PFAWE 241 KV V + D +++ K K+I LS + PRL D+ P+ +E Sbjct: 346 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFE 401 Query: 242 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVAAGWAR 391 +REFLRK +GK+V VDY P R TV +G N+A +V+ G A Sbjct: 402 AREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVSKGLAT 461 Query: 392 V 394 V Sbjct: 462 V 462
>SND1_MOUSE (Q78PY7) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 82.8 bits (203), Expect = 3e-16 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 19/145 (13%) Frame = +2 Query: 47 AIMASNTGASGW------LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR 208 A A ++G+SG RG VK V SG +++ G + PPE+ I LS + A LAR Sbjct: 2 ASSAQSSGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLAR 61 Query: 209 RGGV---------DEPFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----D 349 R DEP+A+ +REFLRK +GKEV F ++ P GRE+G +YLG Sbjct: 62 RAAATQPDGKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNG 120 Query: 350 KNVAYLVVAAGWARVKEQGPKGGEP 424 +N+A +VA G A + +G + P Sbjct: 121 ENIAESLVAEGLA-TRREGMRANNP 144 Score = 45.4 bits (106), Expect = 6e-05 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 20/121 (16%) Frame = +2 Query: 92 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR----------RGGVDEPFAWE 241 KV V + D +++ K K+I LS + PRL R D P+ +E Sbjct: 346 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFE 401 Query: 242 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVAAGWAR 391 +REFLRK +GK+V VDY P R TV +G N+A +V+ G A Sbjct: 402 AREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLAT 461 Query: 392 V 394 V Sbjct: 462 V 462
>SND1_RAT (Q66X93) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (SND p102) (p105 coactivator) Length = 909 Score = 82.0 bits (201), Expect = 6e-16 Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 19/142 (13%) Frame = +2 Query: 56 ASNTGASGW------LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGG 217 A ++G+SG RG VK V SG +++ G + PPE+ I LS + A LARR Sbjct: 4 AQSSGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAA 63 Query: 218 V---------DEPFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNV 358 DEP+A+ +REFLRK +GKEV F ++ P GRE+G +YLG +N+ Sbjct: 64 ATQPDGKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENI 122 Query: 359 AYLVVAAGWARVKEQGPKGGEP 424 A +VA G A + +G + P Sbjct: 123 AESLVAEGLAS-RREGMRANNP 143 Score = 45.8 bits (107), Expect = 4e-05 Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 20/121 (16%) Frame = +2 Query: 92 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR----------RGGVDEPFAWE 241 KV V + D +++ K K+I LS + PRL R D P+ +E Sbjct: 345 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFE 400 Query: 242 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVAAGWAR 391 +REFLRK +GK+V+ VDY P R TV +G N+A +V+ G A Sbjct: 401 AREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLAT 460 Query: 392 V 394 V Sbjct: 461 V 461
>SND1_HUMAN (Q7KZF4) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (EBNA2 coactivator p100) Length = 910 Score = 81.3 bits (199), Expect = 1e-15 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 13/126 (10%) Frame = +2 Query: 86 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGV---------DEPFAW 238 RG +K V SG +++ G + PPE+ I LS + A LARR DEP+A+ Sbjct: 21 RGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWAF 80 Query: 239 ESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNVAYLVVAAGWARVKEQG 406 +REFLRK +GKEV F ++ P GRE+G +YLG +N+A +VA G A + +G Sbjct: 81 PAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREG 138 Query: 407 PKGGEP 424 + P Sbjct: 139 MRANNP 144 Score = 46.2 bits (108), Expect = 3e-05 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 20/121 (16%) Frame = +2 Query: 92 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDE----------PFAWE 241 KV V + D +++ K K+I LS + PRL D+ P+ +E Sbjct: 346 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFE 401 Query: 242 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVAAGWAR 391 +REFLRK +GK+V VDY P R TV +G N+A +V+ G A Sbjct: 402 AREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLAT 461 Query: 392 V 394 V Sbjct: 462 V 462
>YFI3_ECO57 (Q7BSX4) Putative endonuclease precursor (EC 3.1.-.-)| Length = 153 Score = 35.0 bits (79), Expect = 0.079 Identities = 36/108 (33%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Frame = +2 Query: 83 LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRK 262 + G+V V GD + +M S KA I L + AP + G W S + ++ Sbjct: 21 IHGRVVRVLDGDTIEVMDSRKA-----VRIRLVNIDAPEKKQDYG-----RW-STDMMKS 69 Query: 263 LCVGKEVTFRVDYTAPNIGREFGTVYLGD-KNVAYLVVAAGWARVKEQ 403 L GK VT + GR G VY D NV +V AG A V EQ Sbjct: 70 LVAGKTVTVTY-FQRDRYGRMLGQVYAPDGMNVNQFMVRAGAAWVYEQ 116
>YFI3_ECOLI (Q99342) Putative endonuclease precursor (EC 3.1.-.-) (ORFA)| Length = 153 Score = 34.7 bits (78), Expect = 0.10 Identities = 36/108 (33%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Frame = +2 Query: 83 LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRK 262 + G+V V GD + +M S KA I L + AP + G W S + ++ Sbjct: 21 IHGRVVRVLDGDTIEVMDSRKA-----VRIRLVNIDAPEKKQDYG-----RW-STDMMKS 69 Query: 263 LCVGKEVTFRVDYTAPNIGREFGTVYLGD-KNVAYLVVAAGWARVKEQ 403 L GK VT + GR G VY D NV +V AG A V EQ Sbjct: 70 LVAGKTVTVTY-FQRDRYGRILGQVYAPDGMNVNQFMVRAGAAWVYEQ 116
>GBLP_HYDAT (Q25189) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 33.9 bits (76), Expect = 0.18 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Frame = +3 Query: 279 RSHSEWITQLLTSGEN--LALSTSATRTLPTWWLLQDGR---G*RSKAPRGVNH 425 + H+ W+TQ+ T+ +N L LS S +TL W L +D + G K G NH Sbjct: 11 KGHNGWVTQIATTPQNPDLILSASRDKTLIQWQLTRDDQTNYGFPKKCLTGHNH 64
>VG20_BPT4 (P13334) Structural protein of head (Tail tube protein Gp20)| Length = 524 Score = 32.3 bits (72), Expect = 0.51 Identities = 13/47 (27%), Positives = 27/47 (57%) Frame = -2 Query: 355 VLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLIDS 215 V+ +D +KFSP +++ ++ D+L++ F +K +W +DS Sbjct: 108 VVALNLDKSKFSPKIKNMMLDEFSDVLNHLSFQRKGSDHFRRWYVDS 154
>GBLP_BRARE (O42248) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + HS W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 12 KGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 64
>CARX_BACSU (P36838) Carbamoyl-phosphate synthase arginine-specific small chain| (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain) Length = 353 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = -2 Query: 364 VGNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLIDSTT 209 +GN + E D P V++ V++ CD S+ + L + KW I T Sbjct: 57 IGNYGINEKDFESKKPQVKAAVVYEACDHFSHYEAVYSLKEYLQKWNIPLLT 108
>GBLP_CHICK (P63247) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 317 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 64
>GBLP_RAT (P63245) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 11 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 63
>GBLP_PIG (P63246) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 11 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 63
>GBLP_MOUSE (P68040) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) (p205) (12-3) Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 11 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 63
>GBLP_MACFA (Q4R7Y4) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 11 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 63
>GBLP_HUMAN (P63244) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 11 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 63
>GBLP_BOVIN (P63243) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 279 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWLLQD--GRG*RSKAPRGVNH 425 + H+ W+TQ+ T+ + ++ LS S +T+ W L +D G +A RG +H Sbjct: 11 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 63
>PURA1_BURS3 (Q39FS0) Adenylosuccinate synthetase 1 (EC 6.3.4.4) (IMP--aspartate| ligase 1) (AdSS 1) (AMPSase 1) Length = 448 Score = 30.4 bits (67), Expect = 1.9 Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 12/147 (8%) Frame = +2 Query: 11 RRRPLAAGQSQGAIMASNTG-------ASGWL----RGKVKAVTSGDCLLIMGSTKAEIP 157 R +P+ A S+ A+N G A G L G VTS +C+ S A + Sbjct: 206 RLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDIDHGTYPFVTSSNCVAGAASAGAGVG 265 Query: 158 PEKSITLSYLMAPRLARRGGVDE-PFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGT 334 P+K L+Y++ A V PF E + + +V T N+G+EFG+ Sbjct: 266 PQK---LNYILGITKAYCTRVGSGPFPSELYD-----ADNPQRQDQVGVTLANVGKEFGS 317 Query: 335 VYLGDKNVAYLVVAAGWARVKEQGPKG 415 V + +L AA ++ G G Sbjct: 318 VTGRPRRTGWLDAAALRRSIQINGVSG 344
>Y38K_CORSE (Q39635) Hypothetical 38.1 kDa protein| Length = 338 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +2 Query: 227 PFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLGDKNVAYLVVAAGWA 388 PF E++E L KL VGK +T + Y GR G +Y + + ++ G A Sbjct: 240 PFGKEAKEELIKLVVGKCLTVHI-YEEDRYGRSVGDIYCNGQFIQEKMLKKGLA 292
>HISX_BRAJA (P59397) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 431 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +2 Query: 23 LAAGQSQGAIMASNTGASGWLRGKVKAV----TSGDCLLIMGSTKAEIPPEKSITLSYLM 190 + AG S+ ++A +TG + W+ + A TS +LI S + EK++ Sbjct: 232 MIAGPSEVLVIADDTGNADWIAADLLAQAEHDTSAQSILITDSARLAADVEKAVEAQLKT 291 Query: 191 APRLA 205 PR A Sbjct: 292 LPRTA 296
>MTFA_MANSM (Q65U59) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 363 Score = 29.3 bits (64), Expect = 4.3 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -2 Query: 382 SCSNHQVGNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLID 218 + S H G + D KF P RS + CD++ P ++ A +KWL++ Sbjct: 251 AASLHDTGRIDHCPEDGFKFQPPKRSKIDWLVCDMVEQ---PIRIAALIAKWLVN 302
>NADE_TREPA (O83759) Probable glutamine-dependent NAD(+) synthetase (EC| 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) Length = 679 Score = 29.3 bits (64), Expect = 4.3 Identities = 34/124 (27%), Positives = 43/124 (34%), Gaps = 12/124 (9%) Frame = +2 Query: 86 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRKL 265 RG+V A+ D L G+ K ++P E + Y AP D +ES E L Sbjct: 113 RGRVLALVVQDTLAACGAQKMQVPCE----VLYGGAPVPV----YDVQTCFESAEGLFSF 164 Query: 266 CVGKE----------VTFRVDYTA--PNIGREFGTVYLGDKNVAYLVVAAGWARVKEQGP 409 CVG + TA P+I Y AY V AGW Sbjct: 165 CVGAMDGSVPATLVLQAYGTPSTAQTPDIFAAHAAAYSAQHQCAYAYVNAGWGESSADAV 224 Query: 410 KGGE 421 G E Sbjct: 225 YGAE 228
>GBLP_TOBAC (P49026) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 29.3 bits (64), Expect = 4.3 Identities = 10/38 (26%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Frame = +3 Query: 279 RSHSEWITQLLTSGEN--LALSTSATRTLPTWWLLQDG 386 R+H++W+T + T+ +N + +++S +++ W + +DG Sbjct: 13 RAHTDWVTAIATAVDNSDMIVTSSRDKSIIVWSITKDG 50
>GBLP_NICPL (P93340) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/38 (28%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +3 Query: 279 RSHSEWITQLLTSGEN--LALSTSATRTLPTWWLLQDG 386 R+H++W+T + T +N + +++S +++ W L +DG Sbjct: 13 RAHTDWVTAIATPVDNSDMIVTSSRDKSIIVWSLTKDG 50
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 26 AAG--QSQGAIMASNTGASGWLRGKVKAVTSGDCLLIMGS 139 AAG +S+GA + G RG K+ T+GDC GS Sbjct: 66 AAGGAESRGAALGGAADGEGPARGAAKSSTNGDCRRFRGS 105
>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 522 Score = 28.5 bits (62), Expect = 7.4 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = -3 Query: 234 ANGSSTPPRRASLGAIRYDRVMDFSGG----ISALVLPMMRRQSPEVTAFTLPLSHPEAP 67 A G ++P +RASL D +GG +++L +PM QSP+ T + P AP Sbjct: 78 APGLASPTQRASL--FHSDPFAPGAGGGALPVASLAVPMDASQSPDSTPAPATPAAPAAP 135 Query: 66 VFDAMIAPWDWPAASG 19 A AP+ SG Sbjct: 136 A--APAAPFSSLGGSG 149
>DISA_VIPLE (P83253) Disintegrin lebein-alpha (Platelet aggregation activation| inhibitor) Length = 64 Score = 28.5 bits (62), Expect = 7.4 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 334 CLPRRQERCLLGGCCR 381 C PRR E C+ G CCR Sbjct: 12 CKPRRGEHCVSGPCCR 27
>GBLP_SCHPO (Q10281) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) Length = 314 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = +3 Query: 285 HSEWITQLLTSGEN--LALSTSATRTLPTWWLLQD 383 HS W+T L T+ EN + LS S +++ W L++D Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRD 48
>RIBD2_BUCAI (P57534) 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC| 1.1.1.193) (HTP reductase) Length = 207 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -2 Query: 301 VIHSECDLLSYAKFPQKLPAFPSKWLIDSTTTSQPWGHKV*QSDGLLW 158 V + E D + + FP K+ P + +IDS QP H + ++ G +W Sbjct: 44 VRYKELDKKTLSIFPNKIFQHPIRVIIDSKNRVQP-SHNIIKTKGKIW 90
>CRTE_RHOCA (P17060) Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)| (GGPP synthetase) (Farnesyltranstransferase) Length = 289 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +2 Query: 101 AVTSGDCLLIMG----STKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWES 244 AV +GD LLI G + + P++++ L + RGG+ AWES Sbjct: 106 AVLAGDSLLIRGFEVLADVGAVNPDRALKLISKLGQLSGARGGICAGQAWES 157 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,870,008 Number of Sequences: 219361 Number of extensions: 1629406 Number of successful extensions: 5400 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5382 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
