>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 268      gcggcagcagctacggcgccgggagctcggtctcggcttccagcgactacccgttccacc 327
                |||||||||||||||||||||| |||||  |||| || |||||||||| ||| |||||||
Sbjct: 22306809 gcggcagcagctacggcgccggcagctccctctccgcctccagcgacttccccttccacc 22306750

                 
Query: 328      t 328
                |
Sbjct: 22306749 t 22306749

>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0070E11
          Length = 142855

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                          
Query: 268    gcggcagcagctacggcgccgggagctcggtctcggcttccagcgactacccgttccacc 327
              |||||||||||||||||||||| |||||  |||| || |||||||||| ||| |||||||
Sbjct: 126707 gcggcagcagctacggcgccggcagctccctctccgcctccagcgacttccccttccacc 126648

               
Query: 328    t 328
              |
Sbjct: 126647 t 126647

>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1155_H10
          Length = 140475

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 268   gcggcagcagctacggcgccgggagctcggtctcggcttccagcgactacccgttccacc 327
             |||||||||||||||||||||| |||||  |||| || |||||||||| ||| |||||||
Sbjct: 68817 gcggcagcagctacggcgccggcagctccctctccgcctccagcgacttccccttccacc 68758

              
Query: 328   t 328
             |
Sbjct: 68757 t 68757

>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
              sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
              (WM1.12) genes, complete cds; transposons Ophelia2,
              Angela3s, and XJ3, complete sequence; LRR protein WM1.3
              (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1,
              Jody, Angela, and XJ and Stowaway MITE, complete sequence;
              LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1)
              genes, complete cds; transposons XJ, XA, Angela, and Fred
              and WM1.11 gene, complete sequence; RPM1-like sequence and
              LRR protein WM1.10 (WM1.10) genes, complete cds; and
              transposon XJ, complete sequence
          Length = 198649

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 265    gcggcggcagcagctacggcgccggg 290
              |||||||||||||| |||||||||||
Sbjct: 182572 gcggcggcagcagcaacggcgccggg 182597

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 152     gccggcggccggcgggggccgg 173
               ||||||||||||||||||||||
Sbjct: 1240525 gccggcggccggcgggggccgg 1240504

>ref|XM_742636.1| Aspergillus fumigatus Af293 nonribosomal peptide synthetase
            (Afu6g03480) partial mRNA
          Length = 4443

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 259  agtccagcggcggcagcagctacggc 284
            ||||||| ||||||||||||||||||
Sbjct: 1715 agtccagtggcggcagcagctacggc 1740

>dbj|AB074879.2| Rhodobacter sphaeroides f. sp. denitrificans pstS, pstC, pstA, pstB,
            phoU, phoB genes, complete cds
          Length = 8584

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 152  gccggcggccggcgggggccgg 173
            ||||||||||||||||||||||
Sbjct: 7586 gccggcggccggcgggggccgg 7607

>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 206    ggacgacgcggggggcggcac 226
              |||||||||||||||||||||
Sbjct: 111338 ggacgacgcggggggcggcac 111358

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 145     tggagctgccggcggccggc 164
               ||||||||||||||||||||
Sbjct: 1704560 tggagctgccggcggccggc 1704541

>ref|XM_464910.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 ggagctgccggcggccggcggggg 169
           |||||||| |||||||||||||||
Sbjct: 116 ggagctgcgggcggccggcggggg 139

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 116     cggcagcggagggctcgcgc 135
               ||||||||||||||||||||
Sbjct: 6342212 cggcagcggagggctcgcgc 6342193

>emb|X52980.1|SCCSA1 Streptomyces coelicolor hrdA gene for principal sigma factor
          Length = 1902

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 gcggccggcgggggccggcg 175
           ||||||||||||||||||||
Sbjct: 526 gcggccggcgggggccggcg 507

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    tggagctgccggcggccggc 164
              ||||||||||||||||||||
Sbjct: 188111 tggagctgccggcggccggc 188130

>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    gcggccggcgggggccggcg 175
              ||||||||||||||||||||
Sbjct: 231057 gcggccggcgggggccggcg 231076

>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20,
             complete sequence
          Length = 139421

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   ggcggccggcgggggccggc 174
             ||||||||||||||||||||
Sbjct: 53535 ggcggccggcgggggccggc 53516

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 149      gctgccggcggccggcgggggccggcgc 176
                ||||||||||||||||||| | ||||||
Sbjct: 21188642 gctgccggcggccggcgggcgacggcgc 21188615

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 155      ggcggccggcgggggccggc 174
                ||||||||||||||||||||
Sbjct: 14873757 ggcggccggcgggggccggc 14873738

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 209      cgacgcggggggcggcaccaccgg 232
                ||||||||| ||||||||||||||
Sbjct: 19700522 cgacgcgggcggcggcaccaccgg 19700545



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 146     ggagctgccggcggccggcggggg 169
               |||||||| |||||||||||||||
Sbjct: 9948938 ggagctgcgggcggccggcggggg 9948961

>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gcggagggctcgcgcggggg 140
             ||||||||||||||||||||
Sbjct: 90631 gcggagggctcgcgcggggg 90612

>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0521F09
          Length = 164823

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    ggagctgccggcggccggcggggg 169
              |||||||| |||||||||||||||
Sbjct: 129900 ggagctgcgggcggccggcggggg 129923

>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1112_G07
          Length = 149119

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 209  cgacgcggggggcggcaccaccgg 232
            ||||||||| ||||||||||||||
Sbjct: 9073 cgacgcgggcggcggcaccaccgg 9096

>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1136H02
          Length = 145086

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   cgacgcggggggcggcaccaccgg 232
             ||||||||| ||||||||||||||
Sbjct: 57280 cgacgcgggcggcggcaccaccgg 57303

>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0413A11
          Length = 188440

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   ggagctgccggcggccggcggggg 169
             |||||||| |||||||||||||||
Sbjct: 23631 ggagctgcgggcggccggcggggg 23654

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     gcggcggcagcagctacggc 284
               ||||||||||||||||||||
Sbjct: 1913097 gcggcggcagcagctacggc 1913116

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 156     gcggccggcgggggccggcg 175
               ||||||||||||||||||||
Sbjct: 3356348 gcggccggcgggggccggcg 3356329

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 24      gacggagcacgtcacccgca 43
               ||||||||||||||||||||
Sbjct: 1087170 gacggagcacgtcacccgca 1087151

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 155      ggcggccggcgggggccggc 174
                ||||||||||||||||||||
Sbjct: 14881998 ggcggccggcgggggccggc 14881979

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 149      gctgccggcggccggcgggggccggcgc 176
                ||||||||||||||||||| | ||||||
Sbjct: 21114851 gctgccggcggccggcgggcgacggcgc 21114824

>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 149    gctgccggcggccggcgggggccggcgc 176
              ||||||||||||||||||| | ||||||
Sbjct: 101558 gctgccggcggccggcgggcgacggcgc 101585

>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence
          Length = 186258

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 255    cggcagtccagcggcggcagcagc 278
              ||||||| ||||||||||||||||
Sbjct: 170729 cggcagtgcagcggcggcagcagc 170706

>gb|M19156.1|HUMKRT10A Human acidic keratin-10 mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 254  gcggcagtccagcggcggcagcagctacggcg 285
            |||||| ||| ||||||||||||||| |||||
Sbjct: 1240 gcggcactccggcggcggcagcagctccggcg 1271

>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   cggcagtccagcggcggcagcagc 278
             ||||||| ||||||||||||||||
Sbjct: 50386 cggcagtgcagcggcggcagcagc 50363


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,063,011
Number of Sequences: 3902068
Number of extensions: 2063011
Number of successful extensions: 51697
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50997
Number of HSP's gapped (non-prelim): 700
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)