Clone Name | bastl14c11 |
---|---|
Clone Library Name | barley_pub |
>GLR34_ARATH (Q8GXJ4) Glutamate receptor 3.4 precursor (Ligand-gated ion channel| 3.4) (AtGLR4) Length = 959 Score = 48.1 bits (113), Expect = 6e-06 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +1 Query: 112 RPSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 RPS V VGALFTYDS IGRAA+ A++ A+DDV Sbjct: 57 RPSSVNVGALFTYDSFIGRAAKPAVKAAMDDV 88
>GLR35_ARATH (Q9SW97) Glutamate receptor 3.5 precursor (Ligand-gated ion channel| 3.5) (Ionotropic glutamate receptor GLR6) Length = 953 Score = 45.4 bits (106), Expect = 4e-05 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +1 Query: 115 PSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 PS V VGALFTYDS IGRAA+LA A++D+ Sbjct: 45 PSSVNVGALFTYDSFIGRAAKLAFVAAIEDI 75
>GLR37_ARATH (Q9SDQ4) Glutamate receptor 3.7 precursor (Ligand-gated ion channel| 3.7) (Ionotropic glutamate receptor GLR5) Length = 921 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/32 (62%), Positives = 26/32 (81%) Frame = +1 Query: 112 RPSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 RP V +GA+F +DSVIGRAA++A+E AV DV Sbjct: 27 RPQLVNIGAVFAFDSVIGRAAKVALEAAVSDV 58
>GLR33_ARATH (Q9C8E7) Glutamate receptor 3.3 precursor (Ligand-gated ion channel| 3.3) Length = 933 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/32 (50%), Positives = 26/32 (81%) Frame = +1 Query: 112 RPSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 +P V +G++F++DSVIG+ A++AI+ AV DV Sbjct: 25 KPKVVKIGSIFSFDSVIGKVAKIAIDEAVKDV 56
>GLR36_ARATH (Q84W41) Glutamate receptor 3.6 precursor (Ligand-gated ion channel| 3.6) Length = 903 Score = 36.6 bits (83), Expect = 0.018 Identities = 14/32 (43%), Positives = 26/32 (81%) Frame = +1 Query: 112 RPSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 RP V +G++FT++S+IG+ ++A++ AV+DV Sbjct: 26 RPQVVNIGSVFTFNSLIGKVIKVAMDAAVEDV 57
>GLR31_ARATH (Q7XJL2) Glutamate receptor 3.1 precursor (Ligand-gated ion channel| 3.1) (AtGLR2) Length = 921 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 112 RPSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 RP + VGA+F +++ G A +A + A +DV Sbjct: 26 RPPVIKVGAIFGLNTMYGETANIAFKAAEEDV 57
>GLR32_ARATH (Q93YT1) Glutamate receptor 3.2 precursor (Ligand-gated ion channel| 3.2) (AtGluR2) Length = 912 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 106 GPRPSEVAVGALFTYDSVIGRAARLAIELAVDDV 207 G RP V VGA+F+ ++ G +A++ A +DV Sbjct: 24 GLRPRYVDVGAIFSLGTLQGEVTNIAMKAAEEDV 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,151,831 Number of Sequences: 219361 Number of extensions: 144658 Number of successful extensions: 488 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 488 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)