ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
2dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Can... 46 0.099
5gb|AC008120.17| Homo sapiens 3q27 BAC RP11-477P16 (Roswell Park ... 44 0.39
6gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, comp... 44 0.39
7gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 44 0.39
8ref|NM_202530.1| Arabidopsis thaliana D-alanine-D-alanine ligase... 42 1.5
9ref|NM_202529.1| Arabidopsis thaliana D-alanine-D-alanine ligase... 42 1.5
10gb|AC147633.3| Mus musculus BAC clone RP23-302B3 from chromosome... 42 1.5
11gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC... 42 1.5
12gb|AC121880.2| Mus musculus BAC clone RP24-132E6 from 13, comple... 42 1.5
13emb|BX323851.7| Human DNA sequence from clone RP11-242D10 on chr... 42 1.5
14emb|AL590230.5| Human DNA sequence from clone RP11-254L20 on chr... 42 1.5
15emb|AL359258.23| Human DNA sequence from clone RP11-483I13 on ch... 42 1.5
16gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswel... 42 1.5
17dbj|AK118847.1| Arabidopsis thaliana At3g08840 mRNA for unknown ... 42 1.5
18gb|AY285180.1| Sus scrofa clone UMNp1019.gcg microsatellite sequ... 42 1.5
19ref|XM_415845.1| PREDICTED: Gallus gallus similar to N-acetylglu... 40 6.1
20ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) ... 40 6.1
21gb|AC134582.5| Mus musculus BAC clone RP24-90M17 from chromosome... 40 6.1
22gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, co... 40 6.1
23gb|AC003091.1| Homo sapiens BAC clone CTA-326G4 from 7, complete... 40 6.1
24gb|AC073071.2| Homo sapiens BAC clone RP11-238I13 from 7, comple... 40 6.1
25gb|AC116096.3| Homo sapiens chromosome 3 clone RP11-669C19, comp... 40 6.1
26emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on ch... 40 6.1
27emb|Z69722.1|HSU212C1 Human DNA sequence from clone LL0XNC01-212... 40 6.1
28emb|Z83841.1|HS323B6 Human DNA sequence from clone RP3-323B6 on ... 40 6.1
29emb|AL590092.6| Human DNA sequence from clone RP11-237C19 on chr... 40 6.1
30emb|AL513472.9| Human DNA sequence from clone RP11-271J19 on chr... 40 6.1
31emb|AL357354.10| Human DNA sequence from clone RP11-465C5 on chr... 40 6.1
32emb|AL356513.15| Human DNA sequence from clone RP11-108A15 on ch... 40 6.1
33emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chr... 40 6.1
34emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chro... 40 6.1
35emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chr... 40 6.1
36emb|AL121873.15|HSB362E11 Human DNA sequence from clone RP13-362... 40 6.1
37emb|AL109982.1|HSJ281E18 Human DNA sequence from clone RP1-281E1... 40 6.1
38gb|AC107313.5| Homo sapiens 3 BAC RP11-572L16 (Roswell Park Canc... 40 6.1
39dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, ... 40 6.1
40gb|AC074276.18| Homo sapiens 3 BAC RP11-113A11 (Roswell Park Can... 40 6.1
41gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 6.1
42gb|AC104439.2| Homo sapiens chromosome 3 clone RP11-793E15, comp... 40 6.1
43gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, comp... 40 6.1
44gb|AC114283.2| Homo sapiens chromosome 5 clone CTD-2319M2, compl... 40 6.1
45gb|AC063963.11| Homo sapiens chromosome 10 clone RP11-295J3, com... 40 6.1
46gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, com... 40 6.1
47gb|AC106748.3| Homo sapiens chromosome 5 clone RP11-155G15, comp... 40 6.1
48gb|AC116311.1| Homo sapiens chromosome 5 clone CTD-2212M21, comp... 40 6.1
49gb|AC104302.2| Homo sapiens chromosome 3 clone RP11-379L20, comp... 40 6.1
50gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, comple... 40 6.1
51gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 40 6.1
52gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complet... 40 6.1
53gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complet... 40 6.1
54gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, comple... 40 6.1
55gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, compl... 40 6.1
56gb|AC009878.9| Homo sapiens chromosome 15, clone RP11-345N11, co... 40 6.1
57gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 ma... 40 6.1
58gb|AC025452.5| Homo sapiens chromosome 5 clone CTD-2145D4, compl... 40 6.1
59gb|AC016603.6| Homo sapiens chromosome 5 clone CTD-2132G23, comp... 40 6.1
60gb|AC022603.5|AC022603 Homo sapiens chromosome 15, clone RP11-20... 40 6.1
61emb|BX935044.2| Gallus gallus finished cDNA, clone ChEST303g10 40 6.1
62gb|AC108026.5| Homo sapiens BAC clone RP11-41E15 from 4, complet... 40 6.1
63gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complet... 40 6.1
64gb|AC146384.4| Pan troglodytes BAC clone RP43-126A5 from chromos... 40 6.1
65gb|AC087409.1|AC087409 Homo sapiens chromosome X clone 148C3 map... 40 6.1
66gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C... 40 6.1
67gb|AC073417.6| Homo sapiens BAC clone RP11-320I1 from 2, complet... 40 6.1
68gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complet... 40 6.1
69gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6,... 40 6.1
70gb|AC006383.2|AC006383 Homo sapiens BAC clone RP11-498H20 from Y... 40 6.1
71gb|AC010094.5|AC010094 Homo sapiens BAC clone RP11-336O5 from Y,... 40 6.1
72gb|AC138780.3| Homo sapiens BAC clone RP11-361P8 from 4, complet... 40 6.1
73gb|AC096558.1| Homo sapiens BAC clone RP11-186C15 from 2, comple... 40 6.1
74gb|AC015592.6|AC015592 Homo sapiens, clone RP11-44O2, complete s... 40 6.1
75gb|AC020718.7| Homo sapiens BAC clone RP11-472L21 from 2, comple... 40 6.1
76emb|AL590078.2|HS381K22 Homo sapiens chromosome 9 BAC RP11-381K2... 40 6.1
77emb|AL442639.2|HS5P15 Homo sapiens chromosome 9 BAC RP11-5P15, c... 40 6.1
78emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 ma... 40 6.1
79dbj|AP000742.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 6.1
80dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.1
81dbj|AP000620.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 6.1
82gb|AC002509.1|AC002509 Homo sapiens chromosome Y, clone 2Y, comp... 40 6.1
83dbj|AK114340.1| Ciona intestinalis cDNA, clone:cicl057a11, full ... 40 6.1
84gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Can... 40 6.1
85gb|U66060.1| Human germline T-cell receptor beta chain TCRBV13S1... 40 6.1
86gb|U03115.1|HSTCRBV Human V beta T-cell receptor (TCRBV) gene locus 40 6.1
87dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 6.1
88dbj|AP000747.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 6.1 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                            
Query: 109      aagcctggaagatgatatcgcgaagttgagaagcaagttatctgaatttgagaaaagcta 168
                |||| |||||||||| ||  | |||||||| | |||| |||||||| | |||||  | ||
Sbjct: 31039359 aagcttggaagatgagattacaaagttgaggaccaagatatctgaactggagaagtgtta 31039300

                                                                            
Query: 169      tgtaatgaagtgtgaagaagctgccggtgcaattgaagttaaagagaaggatatcactgt 228
                | ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||  
Sbjct: 31039299 tataatgaagtgtgaagaagctgccagtgcaattgaagctaaagagaaggataccacttc 31039240

                         
Query: 229      tctcatgaa 237
                |||||||||
Sbjct: 31039239 tctcatgaa 31039231



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                            
Query: 283      gattgagaacttagaagttgaattggcctcctcaaagagtgctcttgatgagcagtgtaa 342
                |||||| || ||||||  |||| |||| ||||| ||||| |||||||| ||||||| |||
Sbjct: 31039080 gattgaaaaattagaaactgaactggcttcctcgaagagggctcttgacgagcagtataa 31039021

                                                       
Query: 343      gcgttggcgtagcgcacaagacaactacgagcggcaggt 381
                ||||||||||||||| || |||||||| ||||| |||||
Sbjct: 31039020 gcgttggcgtagcgctcaggacaactatgagcgtcaggt 31038982



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 378      aggttatcctgcaatctgaaacaatacaggagctgacaaatacttctaagcaactgtctt 437
                ||||||| |||||||| |||||||||||||||||||||| | |||||||| | || ||||
Sbjct: 31038320 aggttattctgcaatcggaaacaatacaggagctgacaagtgcttctaaggagctatctt 31038261

                               
Query: 438      cattgcagcaggaaa 452
                | |||||||||||||
Sbjct: 31038260 ctttgcagcaggaaa 31038246



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                  
Query: 14       cagtacaaagaaattgcaaactcaaatgaagttgcattgaagtaaatgga 63
                ||||||||||||||||||||||||||||||  |||||||||| |||||||
Sbjct: 31039525 cagtacaaagaaattgcaaactcaaatgaatctgcattgaagcaaatgga 31039476
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>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                         
Query: 109   aagcctggaagatgatatcgcgaagttgagaagcaagttatctgaatttgagaaaagcta 168
             |||| |||||||||| ||  | |||||||| | |||| |||||||| | |||||  | ||
Sbjct: 94315 aagcttggaagatgagattacaaagttgaggaccaagatatctgaactggagaagtgtta 94256

                                                                         
Query: 169   tgtaatgaagtgtgaagaagctgccggtgcaattgaagttaaagagaaggatatcactgt 228
             | ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||  
Sbjct: 94255 tataatgaagtgtgaagaagctgccagtgcaattgaagctaaagagaaggataccacttc 94196

                      
Query: 229   tctcatgaa 237
             |||||||||
Sbjct: 94195 tctcatgaa 94187



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 283   gattgagaacttagaagttgaattggcctcctcaaagagtgctcttgatgagcagtgtaa 342
             |||||| || ||||||  |||| |||| ||||| ||||| |||||||| ||||||| |||
Sbjct: 94036 gattgaaaaattagaaactgaactggcttcctcgaagagggctcttgacgagcagtataa 93977

                                                    
Query: 343   gcgttggcgtagcgcacaagacaactacgagcggcaggt 381
             ||||||||||||||| || |||||||| ||||| |||||
Sbjct: 93976 gcgttggcgtagcgctcaggacaactatgagcgtcaggt 93938



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 378   aggttatcctgcaatctgaaacaatacaggagctgacaaatacttctaagcaactgtctt 437
             ||||||| |||||||| |||||||||||||||||||||| | |||||||| | || ||||
Sbjct: 93276 aggttattctgcaatcggaaacaatacaggagctgacaagtgcttctaaggagctatctt 93217

                            
Query: 438   cattgcagcaggaaa 452
             | |||||||||||||
Sbjct: 93216 ctttgcagcaggaaa 93202



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                               
Query: 14    cagtacaaagaaattgcaaactcaaatgaagttgcattgaagtaaatgga 63
             ||||||||||||||||||||||||||||||  |||||||||| |||||||
Sbjct: 94481 cagtacaaagaaattgcaaactcaaatgaatctgcattgaagcaaatgga 94432
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>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585G03
          Length = 173649

 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                         
Query: 109   aagcctggaagatgatatcgcgaagttgagaagcaagttatctgaatttgagaaaagcta 168
             |||| |||||||||| ||  | |||||||| | |||| |||||||| | |||||  | ||
Sbjct: 28583 aagcttggaagatgagattacaaagttgaggaccaagatatctgaactggagaagtgtta 28524

                                                                         
Query: 169   tgtaatgaagtgtgaagaagctgccggtgcaattgaagttaaagagaaggatatcactgt 228
             | ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||  
Sbjct: 28523 tataatgaagtgtgaagaagctgccagtgcaattgaagctaaagagaaggataccacttc 28464

                      
Query: 229   tctcatgaa 237
             |||||||||
Sbjct: 28463 tctcatgaa 28455



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 283   gattgagaacttagaagttgaattggcctcctcaaagagtgctcttgatgagcagtgtaa 342
             |||||| || ||||||  |||| |||| ||||| ||||| |||||||| ||||||| |||
Sbjct: 28304 gattgaaaaattagaaactgaactggcttcctcgaagagggctcttgacgagcagtataa 28245

                                                    
Query: 343   gcgttggcgtagcgcacaagacaactacgagcggcaggt 381
             ||||||||||||||| || |||||||| ||||| |||||
Sbjct: 28244 gcgttggcgtagcgctcaggacaactatgagcgtcaggt 28206



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 378   aggttatcctgcaatctgaaacaatacaggagctgacaaatacttctaagcaactgtctt 437
             ||||||| |||||||| |||||||||||||||||||||| | |||||||| | || ||||
Sbjct: 27544 aggttattctgcaatcggaaacaatacaggagctgacaagtgcttctaaggagctatctt 27485

                            
Query: 438   cattgcagcaggaaa 452
             | |||||||||||||
Sbjct: 27484 ctttgcagcaggaaa 27470



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                               
Query: 14    cagtacaaagaaattgcaaactcaaatgaagttgcattgaagtaaatgga 63
             ||||||||||||||||||||||||||||||  |||||||||| |||||||
Sbjct: 28749 cagtacaaagaaattgcaaactcaaatgaatctgcattgaagcaaatgga 28700
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>gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 151143

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 394   tgaaacaatacaggagctgacaa 416
             |||||||||||||||||||||||
Sbjct: 45518 tgaaacaatacaggagctgacaa 45540
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>gb|AC008120.17| Homo sapiens 3q27 BAC RP11-477P16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 138779

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    agaaattgcaaactcaaatgaa 43
             ||||||||||||||||||||||
Sbjct: 95960 agaaattgcaaactcaaatgaa 95939
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>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence
          Length = 219258

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 396   aaacaatacaggagctgacaaa 417
             ||||||||||||||||||||||
Sbjct: 47306 aaacaatacaggagctgacaaa 47327
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>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 139    aagcaagttatctgaatttgagaaaa 164
              ||||||||||||||| ||||||||||
Sbjct: 365055 aagcaagttatctgattttgagaaaa 365080
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>ref|NM_202530.1| Arabidopsis thaliana D-alanine-D-alanine ligase AT3G08840 transcript
            variant AT3G08840.3 mRNA, complete cds
          Length = 2791

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  aagcaactgtcttcattgcag 445
            |||||||||||||||||||||
Sbjct: 1898 aagcaactgtcttcattgcag 1918
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>ref|NM_202529.1| Arabidopsis thaliana D-alanine-D-alanine ligase AT3G08840 transcript
            variant AT3G08840.2 mRNA, complete cds
          Length = 2844

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  aagcaactgtcttcattgcag 445
            |||||||||||||||||||||
Sbjct: 1898 aagcaactgtcttcattgcag 1918
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>gb|AC147633.3| Mus musculus BAC clone RP23-302B3 from chromosome 13, complete sequence
          Length = 218640

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   aaaagaagcctggaagatgat 124
             |||||||||||||||||||||
Sbjct: 12135 aaaagaagcctggaagatgat 12115
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>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence,
             complete sequence
          Length = 80381

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 425   aagcaactgtcttcattgcag 445
             |||||||||||||||||||||
Sbjct: 74575 aagcaactgtcttcattgcag 74595
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>gb|AC121880.2| Mus musculus BAC clone RP24-132E6 from 13, complete sequence
          Length = 143546

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    aaaagaagcctggaagatgat 124
              |||||||||||||||||||||
Sbjct: 107363 aaaagaagcctggaagatgat 107383
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>emb|BX323851.7| Human DNA sequence from clone RP11-242D10 on chromosome 1 Contains the
             gene for a novel protein and part of a pseudogene similar
             to part of solute carrier family 25 (mitochondrial
             carrier; phosphate carrier) member 24 (SLC25A24), complete
             sequence
          Length = 54646

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 395   gaaacaatacaggagctgacaaata 419
             ||||||||| |||||||||||||||
Sbjct: 37336 gaaacaatagaggagctgacaaata 37360
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>emb|AL590230.5| Human DNA sequence from clone RP11-254L20 on chromosome 6, complete
             sequence
          Length = 69216

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 396   aaacaatacaggagctgacaa 416
             |||||||||||||||||||||
Sbjct: 50589 aaacaatacaggagctgacaa 50609
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>emb|AL359258.23| Human DNA sequence from clone RP11-483I13 on chromosome 1 Contains the 5'
              end of the SLC25A24 gene for solute carrier family 25
              (mitochondrial carrier; phosphate carrier) member 24, the
              gene for a novel protein, two novel genes, a pseudogene
              similar to solute carrier family 25 (mitochondrial carrier;
              phosphate carrier) member 24 (SLC25A24) and two CpG
              islands, complete sequence
          Length = 188622

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 395    gaaacaatacaggagctgacaaata 419
              ||||||||| |||||||||||||||
Sbjct: 136699 gaaacaatagaggagctgacaaata 136675
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>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 183562

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 396   aaacaatacaggagctgacaa 416
             |||||||||||||||||||||
Sbjct: 86049 aaacaatacaggagctgacaa 86029
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>dbj|AK118847.1| Arabidopsis thaliana At3g08840 mRNA for unknown protein, complete
            cds, clone: RAFL21-17-J10
          Length = 3029

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  aagcaactgtcttcattgcag 445
            |||||||||||||||||||||
Sbjct: 1892 aagcaactgtcttcattgcag 1912
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>gb|AY285180.1| Sus scrofa clone UMNp1019.gcg microsatellite sequence
          Length = 684

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 320 agtgctcttgatgagcagtgt 340
           |||||||||||||||||||||
Sbjct: 74  agtgctcttgatgagcagtgt 54
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>ref|XM_415845.1| PREDICTED: Gallus gallus similar to
            N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
            (Phosphatidylinositol-glycan biosynthesis, class L
            protein) (PIG-L) (LOC417600), mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    ctatatgcttcagtacaaag 23
            ||||||||||||||||||||
Sbjct: 1384 ctatatgcttcagtacaaag 1365
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>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7
          Length = 684973

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 405907 aaacaatacaggagctgaca 405926
to top
>gb|AC134582.5| Mus musculus BAC clone RP24-90M17 from chromosome 15, complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   gatcctgaggaatgaagttt 266
             ||||||||||||||||||||
Sbjct: 72743 gatcctgaggaatgaagttt 72762
to top
>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence
          Length = 234142

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 117888 aaacaatacaggagctgaca 117869
to top
>gb|AC003091.1| Homo sapiens BAC clone CTA-326G4 from 7, complete sequence
          Length = 137817

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 64912 aaacaatacaggagctgaca 64931
to top
>gb|AC073071.2| Homo sapiens BAC clone RP11-238I13 from 7, complete sequence
          Length = 154216

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 95827 aaacaatacaggagctgaca 95846
to top
>gb|AC116096.3| Homo sapiens chromosome 3 clone RP11-669C19, complete sequence
          Length = 164379

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 148125 aaacaatacaggagctgaca 148144
to top
>emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on chromosome 9 Contains a
             pseudogene similar to part of E74-like factor 2 (ets
             domain transcription factor) (EU32, NERF, NERF-2,
             NERF-1A,NERF-1B) (ELF2), a cathepsin L (MEP, CATL) (CTSL)
             pseudogene, a pseudogene similar to part of a
             fructose-1,6-bisphosphatase protein, two novel genes, a
             novel gene (FLJ35866) and a CpG island, complete sequence
          Length = 95932

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 21324 aaacaatacaggagctgaca 21343
to top
>emb|Z69722.1|HSU212C1 Human DNA sequence from clone LL0XNC01-212C1 on chromosome X, complete
             sequence
          Length = 40714

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 17796 aaacaatacaggagctgaca 17777
to top
>emb|Z83841.1|HS323B6 Human DNA sequence from clone RP3-323B6 on chromosome Xq11-12 Contains
             a adaptor-related protein complex 1 (AP1M2) pseudogene, a
             pseudogene similar to part of TLE family (transducin-like
             enhancer of split (E(sp1) homolog, Drosophila)) and two
             CpG islands, complete sequence
          Length = 112762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 61606 aaacaatacaggagctgaca 61625
to top
>emb|AL590092.6| Human DNA sequence from clone RP11-237C19 on chromosome 1, complete
             sequence
          Length = 109470

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 94414 aaacaatacaggagctgaca 94433
to top
>emb|AL513472.9| Human DNA sequence from clone RP11-271J19 on chromosome 6 Contains
            the 5' end of gene KIAA1320, complete sequence
          Length = 70328

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  aaacaatacaggagctgaca 415
            ||||||||||||||||||||
Sbjct: 5798 aaacaatacaggagctgaca 5817
to top
>emb|AL357354.10| Human DNA sequence from clone RP11-465C5 on chromosome Xq21.2-22.1
             Contains a phosphoribosylaminoimidazole carboxylase,
             phosphoribosylaminoimidazole succinocarboxamide synthetase
             (PAICS) pseudogene, complete sequence
          Length = 194612

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 35717 aaacaatacaggagctgaca 35736
to top
>emb|AL356513.15| Human DNA sequence from clone RP11-108A15 on chromosome X Contains the
             3' end of a novel gene similar to Chic1 (LOC349423)and a
             selenophosphate synthetase (SPS) pseudogene, complete
             sequence
          Length = 180619

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 40665 aaacaatacaggagctgaca 40646
to top
>emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chromosome 13 Contains a
             DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1)
             pseudogene, complete sequence
          Length = 157135

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 77184 aaacaatacaggagctgaca 77165
to top
>emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chromosome X Contains a
              melanoma antigen family B 4 pseudogene and a nuclear
              transcription factor Y, gamma (NFYC) pseudogene, complete
              sequence
          Length = 154594

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 103124 aaacaatacaggagctgaca 103143
to top
>emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chromosome 6 Contains the
             5' end of the PDE7B gene for phosphodiesterase 7B and a
             novel gene, complete sequence
          Length = 150072

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   tgaaacaatacaggagctgacaaa 417
             ||||||||||||| ||||||||||
Sbjct: 76330 tgaaacaatacagaagctgacaaa 76353
to top
>emb|AL121873.15|HSB362E11 Human DNA sequence from clone RP13-362E11 on chromosome X Contains an
              ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1)
              pseudogene, complete sequence
          Length = 212280

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 127747 aaacaatacaggagctgaca 127766
to top
>emb|AL109982.1|HSJ281E18 Human DNA sequence from clone RP1-281E18 on chromosome 6p12.1-12.3,
             complete sequence
          Length = 74586

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 36260 aaacaatacaggagctgaca 36279
to top
>gb|AC107313.5| Homo sapiens 3 BAC RP11-572L16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 192509

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 84408 aaacaatacaggagctgaca 84427
to top
>dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, complete sequence
          Length = 149685

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 111867 aaacaatacaggagctgaca 111848
to top
>gb|AC074276.18| Homo sapiens 3 BAC RP11-113A11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 122567 aaacaatacaggagctgaca 122586
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 396      aaacaatacaggagctgaca 415
                ||||||||||||||||||||
Sbjct: 18677405 aaacaatacaggagctgaca 18677424
to top
>gb|AC104439.2| Homo sapiens chromosome 3 clone RP11-793E15, complete sequence
          Length = 197279

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 87227 aaacaatacaggagctgaca 87208
to top
>gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, complete sequence
          Length = 153582

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 143397 aaacaatacaggagctgaca 143378
to top
>gb|AC114283.2| Homo sapiens chromosome 5 clone CTD-2319M2, complete sequence
          Length = 154535

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 26732 aaacaatacaggagctgaca 26751
to top
>gb|AC063963.11| Homo sapiens chromosome 10 clone RP11-295J3, complete sequence
          Length = 179104

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 106276 aaacaatacaggagctgaca 106295
to top
>gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, complete sequence
          Length = 179391

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 33728 aaacaatacaggagctgaca 33747
to top
>gb|AC106748.3| Homo sapiens chromosome 5 clone RP11-155G15, complete sequence
          Length = 169734

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 117279 aaacaatacaggagctgaca 117260
to top
>gb|AC116311.1| Homo sapiens chromosome 5 clone CTD-2212M21, complete sequence
          Length = 123905

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 58783 aaacaatacaggagctgaca 58802
to top
>gb|AC104302.2| Homo sapiens chromosome 3 clone RP11-379L20, complete sequence
          Length = 206872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    agaaattgcaaactcaaatg 41
             ||||||||||||||||||||
Sbjct: 74553 agaaattgcaaactcaaatg 74572
to top
>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence
          Length = 181245

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 137338 aaacaatacaggagctgaca 137319
to top
>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 20855 aaacaatacaggagctgaca 20874
to top
>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence
          Length = 193100

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 118096 aaacaatacaggagctgaca 118077
to top
>gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complete sequence
          Length = 199331

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    caaatacttctaagcaactg 433
              ||||||||||||||||||||
Sbjct: 131041 caaatacttctaagcaactg 131060
to top
>gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, complete sequence
          Length = 166300

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 157010 aaacaatacaggagctgaca 157029
to top
>gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, complete sequence
          Length = 84326

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 27489 aaacaatacaggagctgaca 27470
to top
>gb|AC009878.9| Homo sapiens chromosome 15, clone RP11-345N11, complete sequence
          Length = 198372

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 95016 aaacaatacaggagctgaca 94997
to top
>gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 map human ortholog p11.4,
              complete sequence
          Length = 225601

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 155490 aaacaatacaggagctgaca 155471
to top
>gb|AC025452.5| Homo sapiens chromosome 5 clone CTD-2145D4, complete sequence
          Length = 170195

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 120478 aaacaatacaggagctgaca 120497
to top
>gb|AC016603.6| Homo sapiens chromosome 5 clone CTD-2132G23, complete sequence
          Length = 110879

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    gaaattgcaaactcaaatga 42
             ||||||||||||||||||||
Sbjct: 19351 gaaattgcaaactcaaatga 19332
to top
>gb|AC022603.5|AC022603 Homo sapiens chromosome 15, clone RP11-20B10, complete sequence
          Length = 153223

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 33779 aaacaatacaggagctgaca 33798
to top
>emb|BX935044.2| Gallus gallus finished cDNA, clone ChEST303g10
          Length = 1421

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   ctatatgcttcagtacaaag 23
           ||||||||||||||||||||
Sbjct: 545 ctatatgcttcagtacaaag 526
to top
>gb|AC108026.5| Homo sapiens BAC clone RP11-41E15 from 4, complete sequence
          Length = 123902

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  aaacaatacaggagctgaca 415
            ||||||||||||||||||||
Sbjct: 2302 aaacaatacaggagctgaca 2283
to top
>gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complete sequence
          Length = 82696

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 14240 aaacaatacaggagctgaca 14259
to top
>gb|AC146384.4| Pan troglodytes BAC clone RP43-126A5 from chromosome 7, complete
             sequence
          Length = 120025

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 11199 aaacaatacaggagctgaca 11218
to top
>gb|AC087409.1|AC087409 Homo sapiens chromosome X clone 148C3 map Xq28, complete sequence
          Length = 39411

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 20217 aaacaatacaggagctgaca 20198
to top
>gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C11, complete sequence
          Length = 204843

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    gaaattgcaaactcaaatga 42
             ||||||||||||||||||||
Sbjct: 76484 gaaattgcaaactcaaatga 76503
to top
>gb|AC073417.6| Homo sapiens BAC clone RP11-320I1 from 2, complete sequence
          Length = 35688

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 35417 aaacaatacaggagctgaca 35436
to top
>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence
          Length = 166660

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 57802 aaacaatacaggagctgaca 57821
to top
>gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6, U145C10, U169A5, U84H1, U24D12,
              U80A7, U153E6, L35485, and R7-163A8 containing iduronate
              2-sulfatase gene and pseudogene, complete sequence
          Length = 326663

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 217182 aaacaatacaggagctgaca 217163
to top
>gb|AC006383.2|AC006383 Homo sapiens BAC clone RP11-498H20 from Y, complete sequence
          Length = 105210

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  aaacaatacaggagctgaca 415
            ||||||||||||||||||||
Sbjct: 2060 aaacaatacaggagctgaca 2079
to top
>gb|AC010094.5|AC010094 Homo sapiens BAC clone RP11-336O5 from Y, complete sequence
          Length = 118436

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  aaacaatacaggagctgaca 415
            ||||||||||||||||||||
Sbjct: 4836 aaacaatacaggagctgaca 4855
to top
>gb|AC138780.3| Homo sapiens BAC clone RP11-361P8 from 4, complete sequence
          Length = 14410

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   tgaaacaatacaggagctga 413
             ||||||||||||||||||||
Sbjct: 11221 tgaaacaatacaggagctga 11202
to top
>gb|AC096558.1| Homo sapiens BAC clone RP11-186C15 from 2, complete sequence
          Length = 169453

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   aaagagtgctcttgatgagc 335
             ||||||||||||||||||||
Sbjct: 37651 aaagagtgctcttgatgagc 37670
to top
>gb|AC015592.6|AC015592 Homo sapiens, clone RP11-44O2, complete sequence
          Length = 156961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 43065 aaacaatacaggagctgaca 43084
to top
>gb|AC020718.7| Homo sapiens BAC clone RP11-472L21 from 2, complete sequence
          Length = 170897

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  aaacaatacaggagctgaca 415
            ||||||||||||||||||||
Sbjct: 1729 aaacaatacaggagctgaca 1748
to top
>emb|AL590078.2|HS381K22 Homo sapiens chromosome 9 BAC RP11-381K22, complete sequence
          Length = 203175

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 24841 aaacaatacaggagctgaca 24822
to top
>emb|AL442639.2|HS5P15 Homo sapiens chromosome 9 BAC RP11-5P15, complete sequence
          Length = 165299

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 14562 aaacaatacaggagctgaca 14581
to top
>emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 map Xq28, complete sequence
          Length = 228540

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 177623 aaacaatacaggagctgaca 177604
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>dbj|AP000742.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-82B15, complete
              sequence
          Length = 166543

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 136335 aaacaatacaggagctgaca 136354
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>dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-679A11, complete
              sequence
          Length = 176713

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 156471 aaacaatacaggagctgaca 156490
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>dbj|AP000620.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-36F4, complete
             sequences
          Length = 121878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 27935 aaacaatacaggagctgaca 27954
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>gb|AC002509.1|AC002509 Homo sapiens chromosome Y, clone 2Y, complete sequence
          Length = 142099

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 46415 aaacaatacaggagctgaca 46434
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>dbj|AK114340.1| Ciona intestinalis cDNA, clone:cicl057a11, full insert sequence
          Length = 2176

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 acttctaagcaactgtcttc 438
           ||||||||||||||||||||
Sbjct: 174 acttctaagcaactgtcttc 155
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>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 225736

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   tgaagtttcccagaaagtag 278
             ||||||||||||||||||||
Sbjct: 62215 tgaagtttcccagaaagtag 62196
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>gb|U66060.1| Human germline T-cell receptor beta chain TCRBV13S1, TCRBV6S8A2T,
              TCRBV5S6A3N2T, TCRBV13S6A2T, TCRBV6S9P, TCRBV5S3A2T,
              TCRBV13S8P, TCRBV6S3A1N1T, TCRBV5S2, TCRBV6S6A2T,
              TCRBV5S7P, TCRBV13S4, TCRBV6S2A1N1T, TCRBV5S4A2T,
              TCRBV6S4A1, TCRBV23S1A2T, TCRBV12S1A1N2, TCRBV21S2A2,
              TCRBV8S1, TCRBV8S2A1T, TCRBV8S3, TCRBV16S1A1N1,
              TCRBV24S1A3T, TCRBV25S1A2PT, TCRBV26S1P, TCRBV18S1,
              TCRBV17S1A1T, TCRBV2S1, TCRBV10S1P genes from bases 257519
              to 472940 (section 2 of 3)
          Length = 215422

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacaatacaggagctgaca 415
              ||||||||||||||||||||
Sbjct: 148389 aaacaatacaggagctgaca 148408
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>gb|U03115.1|HSTCRBV Human V beta T-cell receptor (TCRBV) gene locus
          Length = 77743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 41556 aaacaatacaggagctgaca 41575
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>dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-288C17, complete
             sequences
          Length = 143259

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 29526 aaacaatacaggagctgaca 29545
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>dbj|AP000747.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21F7, complete
             sequence
          Length = 103023

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   aaacaatacaggagctgaca 415
             ||||||||||||||||||||
Sbjct: 28705 aaacaatacaggagctgaca 28724


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,375,728
Number of Sequences: 3902068
Number of extensions: 4375728
Number of successful extensions: 77297
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77083
Number of HSP's gapped (non-prelim): 214
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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