>Y023_NPVOP (O10282) Hypothetical 73.1 kDa protein precursor (ORF21)|
          Length = 657

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 132 EDEVLGQSMVVTDELLQGHGLSWVSDF 212
           +DE+L + M    +LL GHGL WV DF
Sbjct: 252 DDELLLREMRQLSKLLAGHGLGWVVDF 278

>ATG3_CANAL (Q5ABQ7) Autophagy-related protein 3 (Autophagy-related E2-like|
           conjugation enzyme ATG3)
          Length = 333

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = -3

Query: 388 NAKLSAFWIILPLSAAASSVDFILFDSDSVKLPVTPDSISE-VLSLFKLGCVTGSGIPAA 212
           N KL  F + +  S +       L   DS  +P+ P  + E + S +K    T   +P A
Sbjct: 174 NNKLRRFDLYITYSTSYRVPKLYLVGFDSNGIPLLPQQMFEDINSDYKDKTATIENLPVA 233

Query: 211 KSETQERP*PCKSSSVTTIL 152
            + T     PCK SSV  +L
Sbjct: 234 HNTTSVSIHPCKHSSVMKVL 253

>LYPD5_MOUSE (Q9D7Z7) Ly6/PLAUR domain-containing protein 5 precursor|
          Length = 256

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 287 NPRLNIRS-PVPLQIRLCHRFRHPSSKIRNPRKAMTLQEFICDDH 156
           N R+NI +  VP+ IR CHR    +    +P  ++ LQ + C+ H
Sbjct: 165 NGRMNIGNFSVPVYIRTCHRPSCTTMGTTSPWTSIDLQGYCCEGH 209

>GATB_RHILO (Q98ND3) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 499

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 388 NAKLSAFWIILPLSAAASSVDFILFDSDSVKLPVTPDSISEVLSLFKLGCVTG 230
           + KL+A W+I  L    + V       D    PV+PD +  ++ L K G ++G
Sbjct: 361 DGKLAANWVINDLLGQLNKVG-----KDIENAPVSPDQLGAIIDLIKDGTISG 408

>POLG_PVYHU (Q02963) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral ge
          Length = 3061

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 240  QPNLKRDRTSDIESGVTGNFTESESKRIKSTDEAAADKGSMIQKAESL 383
            QPNL +++  D+  G +G  T    K I S       KG+ +   + L
Sbjct: 2817 QPNLNKEKEKDVNVGTSGTHTVPRIKAITSKMRMPKSKGAAVLNLKHL 2864

>XYLA_LACBR (P29443) Xylose isomerase (EC 5.3.1.5)|
          Length = 449

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
 Frame = +3

Query: 150 QSMVVTDELLQGHGLSWVSDFAAG------MPEPVTQPNLKRDRTSDIESGVTGNFTESE 311
           +S    ++L  GH +  +  FAAG      M +     NLK DR S  +SGV G   ES 
Sbjct: 347 RSAFAPEDLFLGH-IVGMDSFAAGLRVAAAMKQDGFLDNLKADRYSSYKSGV-GADIESG 404

Query: 312 SKRIKSTDEAAADK 353
              +KS +  A DK
Sbjct: 405 KADLKSLEAYAIDK 418

>GATB_AGRT5 (Q8UFS3) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 501

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 388 NAKLSAFWIILPLSAAASSVDFILFDSDSVKLPVTPDSISEVLSLFKLGCVTG 230
           +AK +A W+I  L  A +      F  D    PV+PD +  ++ L K   ++G
Sbjct: 361 DAKTAANWVINDLLGALNK-----FGKDIETTPVSPDQLGGIIDLIKAETISG 408

>POLG_PVYN (P18247) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral gen
          Length = 3063

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 240  QPNLKRDRTSDIESGVTGNFTESESKRIKSTDEAAADKGSMIQKAESL 383
            QPN  + +  D+ +G +G  T    K I S       KG+ +   E L
Sbjct: 2819 QPNPNKGKDKDVNAGTSGTHTVPRIKAITSKMRMPTSKGATVPNLEHL 2866

>PER2_HUMAN (O15055) Period circadian protein 2|
          Length = 1255

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
 Frame = +3

Query: 36   CERDEKLGCGIASDMTTTTN-GDTQQQLK-HLSSEDEVLGQSMVVTDEL--LQGHGLSWV 203
            C     L CG++ +       G T++ L  H   E++   Q      +L   Q H   ++
Sbjct: 703  CLAGPALACGLSQEKEPFKKLGLTKEVLAAHTQKEEQSFLQKFKEIRKLSIFQSHCHYYL 762

Query: 204  SDFAAGMPEPVTQPNLKRDRTSDIESGVTGNFTESESKRIKSTDEA 341
             + + G P   T P L+     D     TG   + +SKR+K  D +
Sbjct: 763  QERSKGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSS 808

>Y340_METJA (Q57786) Hypothetical protein MJ0340|
          Length = 234

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +3

Query: 69  ASDMTTTTNGDTQQQLKHLSSEDEVLGQSMVVTDELLQGHGLSWVSDFAAGMPEPV--TQ 242
           A     T  GD Q     L+ +D VLG  +V  + +LQ  G  + +    G+ + +  TQ
Sbjct: 24  AKSQVDTFTGDEQNDTFELTKDDAVLGSEIVKVNGVLQFEGQDYTAIHENGILKKIKFTQ 83

Query: 243 P 245
           P
Sbjct: 84  P 84

>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -3

Query: 397 SILNAKLSAFWIILPLSAAASSVDFILFDSDSVK-LPVTPDSISEVLSLFKLGCVTGSG 224
           ++L+  LSA  +I+ L+   S    + FD D  K L  T +   +  + F +G V GSG
Sbjct: 74  ALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAKDLLQTTEGWGQFTAGFLVGAVGGSG 132

>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome|
           biogenesis factor 10)
          Length = 337

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 144 ILHLLKKDASVVAVCHHLWLWSCLM-LCHSLTSHPARIS*QHQHCLP 7
           IL L+       A C HL+ WSCLM  C      P       QHC P
Sbjct: 287 ILCLMNMSDPSCAPCGHLFCWSCLMSWCKERPECPL----CRQHCQP 329

>LAP2_HUMAN (Q96RT1) LAP2 protein (Erbb2-interacting protein) (Erbin)|
           (Densin-180-like protein)
          Length = 1412

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = +3

Query: 78  MTTTTNGDTQQQLKHLSSEDEVLGQSMVVT--DELLQGHGLSWVSDFAAGMPEPVTQPNL 251
           +  T N    + LKH+ + D+V  +S  ++  +E+        + + +   P+ V   N 
Sbjct: 573 LPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNN 632

Query: 252 KRDRTSDIES---GVTGNFTESES 314
           K+D T + +S    VT N  ++ S
Sbjct: 633 KKDDTKETDSLSDEVTHNSNQNNS 656

>PTH_RHOPA (Q6N1P9) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 206

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 273 IESGVTGNFTESESKRIKSTDEAAADKGSMIQKAESLAF 389
           + + V G+F +SE   +++  E AAD   +I K +  +F
Sbjct: 141 VHNHVLGDFAKSERPWVEALCEIAADNAGLIAKGKDASF 179

>AMPA_HAEDU (Q7VNH9) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 499

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 23/111 (20%), Positives = 46/111 (41%)
 Frame = +3

Query: 54  LGCGIASDMTTTTNGDTQQQLKHLSSEDEVLGQSMVVTDELLQGHGLSWVSDFAAGMPEP 233
           +GCG   ++T +      QQ+ H  +   V      +T+ +++   + W   FA    E 
Sbjct: 76  VGCGKQDELTESQYKKIMQQMMHAINATAVQQAVCFLTELMVKQRTIYWNIRFAI---ES 132

Query: 234 VTQPNLKRDRTSDIESGVTGNFTESESKRIKSTDEAAADKGSMIQKAESLA 386
           +       D    I++ V G  T+         D   A++G  ++ A+++A
Sbjct: 133 IQASRYVYDVFKSIKAKVVGKLTQIIFNVANQQDLLEAERG--LKHAQAIA 181

>MMP1_PIG (P21692) Interstitial collagenase precursor (EC 3.4.24.7) (Matrix|
           metalloproteinase-1) (MMP-1) [Contains: 18 kDa
           interstitial collagenase]
          Length = 469

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 265 VLSLFKLGCVTGS-GIPAAKSETQER 191
           +L L  L C TGS G PAA SETQE+
Sbjct: 4   LLLLLLLLCNTGSHGFPAATSETQEQ 29

>VAT_CAMVC (P03549) Aphid transmission protein (Protein 2)|
          Length = 159

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
 Frame = +3

Query: 84  TTTNGDTQQQLKHLSSEDEVLGQSMVVTDELLQGHGLSWVSDFAAGMPEPV--TQPNLKR 257
           +++ G+ Q  + HL++ +E++G+S++   ++    GLS     +      V  T  N+ +
Sbjct: 33  SSSKGNIQNIINHLNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKNIFK 92

Query: 258 DRTSDIESGV--TGNFTESESKRIKSTDEAAADKGSMIQ 368
            R  D  S +    +  E+++ RIK+ + A     + I+
Sbjct: 93  SRGVDYSSQLKEVKSLLEAQNTRIKNLENAIQSLDNKIE 131

>ANXA1_PIG (P19619) Annexin A1 (Annexin I) (Lipocortin I) (Calpactin II)|
           (Chromobindin-9) (p35) (Phospholipase A2 inhibitory
           protein)
          Length = 346

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 48  EKLGCGIASDMTTTTNGDTQQQLKHLSSEDEVLGQSMVVTDEL 176
           E+L   +A D+T+ T+GD Q+ L  L+  D    + + + D+L
Sbjct: 158 EELKRDLAKDITSDTSGDYQKALLSLAKGDR--SEDLAINDDL 198

>NBR1_MOUSE (P97432) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1|
           protein) (Membrane component, chromosome 17, surface
           marker 2)
          Length = 988

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 17/101 (16%)
 Frame = +3

Query: 36  CERDEKLGCGIASDMTTTTNGDTQQQLKHLSSEDEVLGQSMVVTDELLQGHGLSWVSDFA 215
           C +D  L   +  +      GD ++++ H+  E+EV+ +   V DE +Q    +   D+ 
Sbjct: 696 CRKDSSLKFALPEE---GPRGDEREEIVHIV-EEEVVEEEEEVQDEEVQSQSSASSEDYI 751

Query: 216 AGMPE---------------PVTQPNLKRDRTSD--IESGV 287
             +PE                ++QP L+R    +  IESG+
Sbjct: 752 IILPECFDTSRPLGDSMYSSALSQPGLERGAEGEPGIESGL 792


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,796,521
Number of Sequences: 219361
Number of extensions: 819207
Number of successful extensions: 2709
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2709
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)