ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 Score = 872 bits (440), Expect = 0.0 Identities = 442/443 (99%) Strand = Plus / Plus Query: 1 ctacggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ctacggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgt 535 Query: 61 ccccctcctcaccaatggccagatggtcgatgacatcccgccggagcagcatgcccttgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 ccccctcctcaccaatggccagatggtcgatgacatcccgccggagcagcatgcccttgt 595 Query: 121 tccttccttcgtcggcggcgggggaaagaggatccacccgctcccttatgctgattccaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 tccttccttcgtcggcggcgggggaaagaggatccacccgctcccttatgctgattccaa 655 Query: 181 ccttcctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 ccttcctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgg 715 Query: 241 gagcgtcgcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gagcgtcgcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatca 775 Query: 301 gaccaggaatgatggcggtaaagactggaacggngatggcgacgatgcagatctaccact 360 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 776 gaccaggaatgatggcggtaaagactggaacggggatggcgacgatgcagatctaccact 835 Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 895 Query: 421 tccttacaggatgatcattgtga 443 ||||||||||||||||||||||| Sbjct: 896 tccttacaggatgatcattgtga 918
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 406 bits (205), Expect = e-110 Identities = 377/434 (86%), Gaps = 3/434 (0%) Strand = Plus / Plus Query: 5 ggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgtcccc 64 ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| ||| Sbjct: 406 ggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttccc 465 Query: 65 ctcctcaccaatggccagatggtcgatgacatcccgccggagcagcatgcccttgttcct 124 ||||||||||| || |||||| ||||||||||||||||||||||| |||||||| || Sbjct: 466 ctcctcaccaacggggagatggctgatgacatcccgccggagcagcacgcccttgtgccg 525 Query: 125 tccttcgtcggcggcgggggaaagaggatccacccgctcccttatgctgattccaacctt 184 || ||| | |||||||| ||||||||||||||||| || |||||||| ||| | |||||| Sbjct: 526 tctttcatgggcggcggaggaaagaggatccaccctcttccttatgcggatccaaacctt 585 Query: 185 cctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagc 244 |||||||||||||||||||||||||| ||||||||| | | | || ||||||||||| Sbjct: 586 cctgtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagt 645 Query: 245 gtcgcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagacc 304 ||||| ||||| || || ||||| |||||||||||||||||||||||| | || |||| Sbjct: 646 gtcgcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatg 705 Query: 305 aggaatgatggc---ggtaaagactggaacggngatggcgacgatgcagatctaccacta 361 |||||||||||| |||||||| ||| |||| |||||||| |||||||||||||||||| Sbjct: 706 aggaatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccacta 765 Query: 362 atggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaat 421 ||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| | ||| Sbjct: 766 atggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaat 825 Query: 422 ccttacaggatgat 435 ||||| |||||||| Sbjct: 826 ccttataggatgat 839
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 406 bits (205), Expect = e-110 Identities = 377/434 (86%), Gaps = 3/434 (0%) Strand = Plus / Plus Query: 5 ggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgtcccc 64 ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| ||| Sbjct: 576 ggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttccc 635 Query: 65 ctcctcaccaatggccagatggtcgatgacatcccgccggagcagcatgcccttgttcct 124 ||||||||||| || |||||| ||||||||||||||||||||||| |||||||| || Sbjct: 636 ctcctcaccaacggggagatggctgatgacatcccgccggagcagcacgcccttgtgccg 695 Query: 125 tccttcgtcggcggcgggggaaagaggatccacccgctcccttatgctgattccaacctt 184 || ||| | |||||||| ||||||||||||||||| || |||||||| ||| | |||||| Sbjct: 696 tctttcatgggcggcggaggaaagaggatccaccctcttccttatgcggatccaaacctt 755 Query: 185 cctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagc 244 |||||||||||||||||||||||||| ||||||||| | | | || ||||||||||| Sbjct: 756 cctgtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagt 815 Query: 245 gtcgcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagacc 304 ||||| ||||| || || ||||| |||||||||||||||||||||||| | || |||| Sbjct: 816 gtcgcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatg 875 Query: 305 aggaatgatggc---ggtaaagactggaacggngatggcgacgatgcagatctaccacta 361 |||||||||||| |||||||| ||| |||| |||||||| |||||||||||||||||| Sbjct: 876 aggaatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccacta 935 Query: 362 atggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaat 421 ||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| | ||| Sbjct: 936 atggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaat 995 Query: 422 ccttacaggatgat 435 ||||| |||||||| Sbjct: 996 ccttataggatgat 1009
>dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086F23, full insert sequence Length = 4127 Score = 365 bits (184), Expect = 8e-98 Identities = 338/389 (86%), Gaps = 3/389 (0%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgac 94 ||||| |||||||| ||||||||||| |||||||| ||| |||| |||||||| |||||| Sbjct: 694 cagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggttgatgac 753 Query: 95 atcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaagaggatc 154 |||||||||||||||||||| ||||| || || || | ||||||||||||||||||||| Sbjct: 754 atcccgccggagcagcatgcgcttgtgccatcttttatgggcggcgggggaaagaggatc 813 Query: 155 cacccgctcccttatgctgattccaaccttcctgtgcaaccaagatccatggacccatcc 214 |||||||| |||||||| ||| |||| || ||||| ||||||||||| |||||||||||| Sbjct: 814 cacccgcttccttatgcggatcccaatctacctgttcaaccaagatctatggacccatcc 873 Query: 215 aaggatattggttcctacgggtatgggagcgtcgcctggaaggagaggatggagagctgg 274 |||||| ||| | | ||||| ||||| || || || |||||||||||||||||||||||| Sbjct: 874 aaggatcttgctgcatacggttatggtagtgttgcgtggaaggagaggatggagagctgg 933 Query: 275 aagcagaagcaggagaggctgcatcagaccaggaatga---tggcggtaaagactggaac 331 ||||||||||||||||||||||| |||| || ||||| ||| |||||||||||| | Sbjct: 934 aagcagaagcaggagaggctgcaccagatgagaaatgatggtggtggtaaagactgggat 993 Query: 332 ggngatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccaga 391 || ||||| || |||| ||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 994 ggcgatggtgatgatggagatctaccactaatggatgaagctaggcagccattgtccaga 1053 Query: 392 aaggttcccattccttcaagcctgattaa 420 || || || ||||||||||| | |||||| Sbjct: 1054 aaagtcccaattccttcaagtcagattaa 1082
>dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D15, full insert sequence Length = 4208 Score = 365 bits (184), Expect = 8e-98 Identities = 338/389 (86%), Gaps = 3/389 (0%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgac 94 ||||| |||||||| ||||||||||| |||||||| ||| |||| |||||||| |||||| Sbjct: 775 cagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggttgatgac 834 Query: 95 atcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaagaggatc 154 |||||||||||||||||||| ||||| || || || | ||||||||||||||||||||| Sbjct: 835 atcccgccggagcagcatgcgcttgtgccatcttttatgggcggcgggggaaagaggatc 894 Query: 155 cacccgctcccttatgctgattccaaccttcctgtgcaaccaagatccatggacccatcc 214 |||||||| |||||||| ||| |||| || ||||| ||||||||||| |||||||||||| Sbjct: 895 cacccgcttccttatgcggatcccaatctacctgttcaaccaagatctatggacccatcc 954 Query: 215 aaggatattggttcctacgggtatgggagcgtcgcctggaaggagaggatggagagctgg 274 |||||| ||| | | ||||| ||||| || || || |||||||||||||||||||||||| Sbjct: 955 aaggatcttgctgcatacggttatggtagtgttgcgtggaaggagaggatggagagctgg 1014 Query: 275 aagcagaagcaggagaggctgcatcagaccaggaatga---tggcggtaaagactggaac 331 ||||||||||||||||||||||| |||| || ||||| ||| |||||||||||| | Sbjct: 1015 aagcagaagcaggagaggctgcaccagatgagaaatgatggtggtggtaaagactgggat 1074 Query: 332 ggngatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccaga 391 || ||||| || |||| ||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 1075 ggcgatggtgatgatggagatctaccactaatggatgaagctaggcagccattgtccaga 1134 Query: 392 aaggttcccattccttcaagcctgattaa 420 || || || ||||||||||| | |||||| Sbjct: 1135 aaagtcccaattccttcaagtcagattaa 1163
>dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M21, full insert sequence Length = 2931 Score = 351 bits (177), Expect = 1e-93 Identities = 338/390 (86%), Gaps = 4/390 (1%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgac 94 ||||| |||||||| ||||||||||| |||||||| ||| |||| |||||||| |||||| Sbjct: 697 cagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggttgatgac 756 Query: 95 atcccgccggagcagcatgcccttgttccttccttcgtcgg-cggcgggggaaagaggat 153 |||||||||||||||||||| ||||| || || || | || |||||||||||||||||| Sbjct: 757 atcccgccggagcagcatgcgcttgtgccatcttttatggggcggcgggggaaagaggat 816 Query: 154 ccacccgctcccttatgctgattccaaccttcctgtgcaaccaagatccatggacccatc 213 ||||||||| |||||||| ||| |||| || ||||| ||||||||||| ||||||||||| Sbjct: 817 ccacccgcttccttatgcggatcccaatctacctgttcaaccaagatctatggacccatc 876 Query: 214 caaggatattggttcctacgggtatgggagcgtcgcctggaaggagaggatggagagctg 273 ||||||| ||| | | ||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 877 caaggatcttgctgcatacggttatggtagtgttgcgtggaaggagaggatggagagctg 936 Query: 274 gaagcagaagcaggagaggctgcatcagaccaggaatga---tggcggtaaagactggaa 330 |||||||||||||||||||||||| |||| || ||||| ||| |||||||||||| | Sbjct: 937 gaagcagaagcaggagaggctgcaccagatgagaaatgatggtggtggtaaagactggga 996 Query: 331 cggngatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccag 390 || ||||| || |||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 997 tggcgatggtgatgatggagatctaccactaatggatgaagctaggcagccattgtccag 1056 Query: 391 aaaggttcccattccttcaagcctgattaa 420 ||| || || ||||||||||| | |||||| Sbjct: 1057 aaaagtcccaattccttcaagtcagattaa 1086
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 281 bits (142), Expect = 9e-73 Identities = 274/318 (86%) Strand = Plus / Plus Query: 1 ctacggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgt 60 |||||||||||||| |||||||||||||||| ||||| ||||| || | ||||||||| Sbjct: 354 ctacggccgcggcgccgacctcgacggcgtgccgcagccattccaccccatccccaatgt 413 Query: 61 ccccctcctcaccaatggccagatggtcgatgacatcccgccggagcagcatgcccttgt 120 |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 414 tcccctcctcaccaacggacagatggtcgatgacatcccgccggaccagcacgcccttgt 473 Query: 121 tccttccttcgtcggcggcgggggaaagaggatccacccgctcccttatgctgattccaa 180 || || ||||| || |||||||| |||||||| ||||| ||||| || || ||| |||| Sbjct: 474 gccctcgttcgtgggtggcggggggaagaggattcaccctctcccgtacgcggatcccaa 533 Query: 181 ccttcctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgg 240 ||||||||||||||| || || |||||||| ||||||||| | | | || || || || Sbjct: 534 ccttcctgtgcaaccgaggtctatggacccttccaaggatctcgccgcatatggctacgg 593 Query: 241 gagcgtcgcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatca 300 |||||| || |||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 594 gagcgtagcatggaaggagaggatggagagctggaagcagaagcaggagaggatgcacca 653 Query: 301 gaccaggaatgatggcgg 318 ||| ||||| |||||||| Sbjct: 654 gacgaggaacgatggcgg 671 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 679 gatggtgatgatgcagatctaccactaatggatgaagctagacagccattgtccagaaag 738 Query: 395 gttcccattccttcaagcc 413 | || |||||||||||| Sbjct: 739 atcccgcttccttcaagcc 757
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 281 bits (142), Expect = 9e-73 Identities = 274/318 (86%) Strand = Plus / Plus Query: 1 ctacggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgt 60 |||||||||||||| |||||||||||||||| ||||| ||||| || | ||||||||| Sbjct: 587 ctacggccgcggcgccgacctcgacggcgtgccgcagccattccaccccatccccaatgt 646 Query: 61 ccccctcctcaccaatggccagatggtcgatgacatcccgccggagcagcatgcccttgt 120 |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 647 tcccctcctcaccaacggacagatggtcgatgacatcccgccggaccagcacgcccttgt 706 Query: 121 tccttccttcgtcggcggcgggggaaagaggatccacccgctcccttatgctgattccaa 180 || || ||||| || |||||||| |||||||| ||||| ||||| || || ||| |||| Sbjct: 707 gccctcgttcgtgggtggcggggggaagaggattcaccctctcccgtacgcggatcccaa 766 Query: 181 ccttcctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgg 240 ||||||||||||||| || || |||||||| ||||||||| | | | || || || || Sbjct: 767 ccttcctgtgcaaccgaggtctatggacccttccaaggatctcgccgcatatggctacgg 826 Query: 241 gagcgtcgcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatca 300 |||||| || |||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 827 gagcgtagcatggaaggagaggatggagagctggaagcagaagcaggagaggatgcacca 886 Query: 301 gaccaggaatgatggcgg 318 ||| ||||| |||||||| Sbjct: 887 gacgaggaacgatggcgg 904 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 912 gatggtgatgatgcagatctaccactaatggatgaagctagacagccattgtccagaaag 971 Query: 395 gttcccattccttcaagcc 413 | || |||||||||||| Sbjct: 972 atcccgcttccttcaagcc 990
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 200 bits (101), Expect = 3e-48 Identities = 208/244 (85%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 52 ccccaatgtccccctcctcaccaatggccagatggtcgatgacatcccgccggagcagca 111 |||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 662 ccccaacgtgccgctcctcaccaacggccagatggttgatgacatcccgccggagcagca 721 Query: 112 tgcccttgttccttccttcgt------cggcggcgggggaaagaggatccacccgctccc 165 || || || || |||| | | ||||||||| || |||||||||||||||||||| Sbjct: 722 cgcgctcgtgccgtcctacatgggcggcggcggcggcggcaagaggatccacccgctccc 781 Query: 166 ttatgctgattccaaccttcctgtgcaaccaagatccatggacccatccaaggatattgg 225 | ||||||||||||||||| |||||||| |||||||||||||| ||||||||| | | Sbjct: 782 cttcgctgattccaaccttccagtgcaaccgagatccatggacccgtccaaggatctggc 841 Query: 226 ttcctacgggtatgggagcgtcgcctggaaggagaggatggagagctggaagcagaagca 285 ||||||| ||||| ||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 842 cgcctacggatatggcagcgtggcctggaaggagagaatggagggctggaagcagaagca 901 Query: 286 ggag 289 |||| Sbjct: 902 ggag 905 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 945 gatggcgacgatgcagatctgccactaatggatgaagctaggcagccattgtccagaaaa 1004 Query: 395 gttcccattccttcaagcctgattaatccttacaggatgat 435 || || || | ||||||| |||||||| ||||||||||| Sbjct: 1005 gtccctatatcatcaagccgaattaatccctacaggatgat 1045
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 170 bits (86), Expect = 2e-39 Identities = 249/303 (82%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctcccttatgctgattccaaccttcctgtgca 192 ||||||||| || |||||||||||||||||||| | || ||| | | | |||||||||| Sbjct: 608 cggcggcggcgggaagaggatccacccgctccccttcgcagatccgagcgttcctgtgca 667 Query: 193 accaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcctg 252 ||| |||||||||||||| ||||||||| | | |||||||||| ||||| || || || Sbjct: 668 accgagatccatggacccgtccaaggatctcgccgcctacgggtacgggagtgtggcatg 727 Query: 253 gaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccaggaatga 312 |||||||||||||||| |||||||||||||||||||| || |||| ||| ||||| ||| Sbjct: 728 gaaggagaggatggagggctggaagcagaagcaggagcggatgcagcagctcaggagtga 787 Query: 313 tggcggtaaagactggaacggngatggcgacgatgcagatctaccactaatggatgaagc 372 ||||| |||||| | || || || |||||||||||| ||||||||||||||||| Sbjct: 788 gggcggcggcgactgggatggcga---cggcgatgcagatctgccactaatggatgaagc 844 Query: 373 tagacagccactgtccagaaaggttcccattccttcaagcctgattaatccttacaggat 432 | |||| ||||| || | || ||||| ||| ||||||||| |||||||| || ||||| Sbjct: 845 tcgacaaccactatctcgcaaagttccaatttcttcaagccgaattaatccctataggat 904 Query: 433 gat 435 ||| Sbjct: 905 gat 907 Score = 97.6 bits (49), Expect = 3e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgac 94 ||||| |||||||| | ||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 501 cagccgttccagcccatccccaatgtgccgctcctcaccaatggccagatggttgacgac 560 Query: 95 atcccgccggagcagca 111 ||||||||||||||||| Sbjct: 561 atcccgccggagcagca 577
>dbj|AK099735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G16, full insert sequence Length = 2064 Score = 170 bits (86), Expect = 2e-39 Identities = 249/303 (82%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctcccttatgctgattccaaccttcctgtgca 192 ||||||||| || |||||||||||||||||||| | || ||| | | | |||||||||| Sbjct: 608 cggcggcggcgggaagaggatccacccgctccccttcgcagatccgagcgttcctgtgca 667 Query: 193 accaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcctg 252 ||| |||||||||||||| ||||||||| | | |||||||||| ||||| || || || Sbjct: 668 accgagatccatggacccgtccaaggatctcgccgcctacgggtacgggagtgtggcatg 727 Query: 253 gaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccaggaatga 312 |||||||||||||||| |||||||||||||||||||| || |||| ||| ||||| ||| Sbjct: 728 gaaggagaggatggagggctggaagcagaagcaggagcggatgcagcagctcaggagtga 787 Query: 313 tggcggtaaagactggaacggngatggcgacgatgcagatctaccactaatggatgaagc 372 ||||| |||||| | || || || |||||||||||| ||||||||||||||||| Sbjct: 788 gggcggcggcgactgggatggcga---cggcgatgcagatctgccactaatggatgaagc 844 Query: 373 tagacagccactgtccagaaaggttcccattccttcaagcctgattaatccttacaggat 432 | |||| ||||| || | || ||||| ||| ||||||||| |||||||| || ||||| Sbjct: 845 tcgacaaccactatctcgcaaagttccaatttcttcaagccgaattaatccctataggat 904 Query: 433 gat 435 ||| Sbjct: 905 gat 907 Score = 97.6 bits (49), Expect = 3e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgac 94 ||||| |||||||| | ||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 501 cagccgttccagcccatccccaatgtgccgctcctcaccaatggccagatggttgacgac 560 Query: 95 atcccgccggagcagca 111 ||||||||||||||||| Sbjct: 561 atcccgccggagcagca 577
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 170 bits (86), Expect = 2e-39 Identities = 249/303 (82%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctcccttatgctgattccaaccttcctgtgca 192 ||||||||| || |||||||||||||||||||| | || ||| | | | |||||||||| Sbjct: 608 cggcggcggcgggaagaggatccacccgctccccttcgcagatccgagcgttcctgtgca 667 Query: 193 accaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcctg 252 ||| |||||||||||||| ||||||||| | | |||||||||| ||||| || || || Sbjct: 668 accgagatccatggacccgtccaaggatctcgccgcctacgggtacgggagtgtggcatg 727 Query: 253 gaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccaggaatga 312 |||||||||||||||| |||||||||||||||||||| || |||| ||| ||||| ||| Sbjct: 728 gaaggagaggatggagggctggaagcagaagcaggagcggatgcagcagctcaggagtga 787 Query: 313 tggcggtaaagactggaacggngatggcgacgatgcagatctaccactaatggatgaagc 372 ||||| |||||| | || || || |||||||||||| ||||||||||||||||| Sbjct: 788 gggcggcggcgactgggatggcga---cggcgatgcagatctgccactaatggatgaagc 844 Query: 373 tagacagccactgtccagaaaggttcccattccttcaagcctgattaatccttacaggat 432 | |||| ||||| || | || ||||| ||| ||||||||| |||||||| || ||||| Sbjct: 845 tcgacaaccactatctcgcaaagttccaatttcttcaagccgaattaatccctataggat 904 Query: 433 gat 435 ||| Sbjct: 905 gat 907 Score = 97.6 bits (49), Expect = 3e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgac 94 ||||| |||||||| | ||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 501 cagccgttccagcccatccccaatgtgccgctcctcaccaatggccagatggttgacgac 560 Query: 95 atcccgccggagcagca 111 ||||||||||||||||| Sbjct: 561 atcccgccggagcagca 577
>gb|BT009139.1| Triticum aestivum clone wl1n.pk0044.b1:fis, full insert mRNA sequence Length = 1157 Score = 168 bits (85), Expect = 1e-38 Identities = 139/157 (88%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctcccttatgctgattccaaccttcctgtgca 192 |||||||||||| |||||||||||||||||||||| || ||| |||||||||| ||||| Sbjct: 88 cggcggcgggggcaagaggatccacccgctccctttcgcagatcccaaccttccagtgca 147 Query: 193 accaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcctg 252 ||| |||||||||||||| ||||||||| | | ||||||| ||||| ||||| ||||| Sbjct: 148 accgagatccatggacccgtccaaggatctggccgcctacggatatggcagcgtggcctg 207 Query: 253 gaaggagaggatggagagctggaagcagaagcaggag 289 ||||||||| |||||| |||||||||||||||||||| Sbjct: 208 gaaggagagaatggagggctggaagcagaagcaggag 244 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 284 gatggcgacgatgcagatctgccactaatggatgaagctaggcagccattgtccagaaaa 343 Query: 395 gttcccattccttcaagcctgattaatccttacaggatgat 435 || || || | ||||||| |||||||| ||||||||||| Sbjct: 344 gtccctatatcatcaagccgaattaatccctacaggatgat 384 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 65 ctcctcaccaatggccagatggtcgatgacatcccgccggagcagca 111 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 11 ctcctcaccaacggccagatggttgatgacatcccgccggagcagca 57
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 168 bits (85), Expect = 1e-38 Identities = 139/157 (88%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctcccttatgctgattccaaccttcctgtgca 192 |||||||||||| |||||||||||||||||||||| || ||| |||||||||| ||||| Sbjct: 765 cggcggcgggggcaagaggatccacccgctccctttcgcagatcccaaccttccagtgca 824 Query: 193 accaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcctg 252 ||| |||||||||||||| ||||||||| | | ||||||| ||||| ||||| ||||| Sbjct: 825 accgagatccatggacccgtccaaggatctggccgcctacggatatggcagcgtggcctg 884 Query: 253 gaaggagaggatggagagctggaagcagaagcaggag 289 ||||||||| |||||| |||||||||||||||||||| Sbjct: 885 gaaggagagaatggagggctggaagcagaagcaggag 921 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 961 gatggcgacgatgcagatctgccactaatggatgaagctaggcagccattgtccagaaaa 1020 Query: 395 gttcccattccttcaagcctgattaatccttacaggatgat 435 || || || | ||||||| |||||||| ||||||||||| Sbjct: 1021 gtccctatatcatcaagccgaattaatccctacaggatgat 1061 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 52 ccccaatgtccccctcctcaccaatggccagatggtcgatgacatcccgccggagcagca 111 |||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 675 ccccaacgtgccgctcctcaccaacggccagatggttgatgacatcccgccggagcagca 734
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 151 bits (76), Expect = 2e-33 Identities = 149/173 (86%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 191 caaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcc 250 ||||||||||| |||||||||||||||||| ||| | | ||||| ||||| || || || Sbjct: 13692320 caaccaagatctatggacccatccaaggatcttgctgcatacggttatggtagtgttgcg 13692261 Query: 251 tggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccaggaat 310 ||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| Sbjct: 13692260 tggaaggagaggatggagagctggaagcagaagcaggagaggctgcaccagatgagaaat 13692201 Query: 311 ga---tggcggtaaagactggaacggngatggcgacgatgcagatctaccact 360 || ||| |||||||||||| | || ||||| || |||| |||||||||||| Sbjct: 13692200 gatggtggtggtaaagactgggatggcgatggtgatgatggagatctaccact 13692148 Score = 109 bits (55), Expect = 8e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 188 gtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtc 247 |||||||| |||||||||||||| ||||||||| | | |||||||||| ||||| || Sbjct: 8529375 gtgcaaccgagatccatggacccgtccaaggatctcgccgcctacgggtacgggagtgtg 8529434 Query: 248 gcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccagg 307 || |||||||||||||||||| |||||||||||||||||||| || |||| ||| |||| Sbjct: 8529435 gcatggaaggagaggatggagggctggaagcagaagcaggagcggatgcagcagctcagg 8529494 Query: 308 aatgatggcgg 318 | ||| ||||| Sbjct: 8529495 agtgagggcgg 8529505 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 89 gatgacatcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaag 148 |||||||||||||||||||||||||| ||||| || || || | ||||||||||||||| Sbjct: 13692504 gatgacatcccgccggagcagcatgcgcttgtgccatcttttatgggcggcgggggaaag 13692445 Query: 149 aggatccacccgctcccttatgctgattccaa 180 |||||||||||||| |||||||| ||| |||| Sbjct: 13692444 aggatccacccgcttccttatgcggatcccaa 13692413 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggt 87 ||||| |||||||| | ||||||||| || ||||||||||||||||||||||| Sbjct: 8529018 cagccgttccagcccatccccaatgtgccgctcctcaccaatggccagatggt 8529070 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 ||||||||||||||| |||||| |||||||||| || || ||||||||||| | |||||| Sbjct: 13691798 aatggatgaagctaggcagccattgtccagaaaagtcccaattccttcaagtcagattaa 13691739 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggt 87 ||||| |||||||| ||||||||||| |||||||| ||| |||| |||||||| Sbjct: 13692649 cagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggt 13692597 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctccc 165 ||||||||| || |||||||||||||||||||| Sbjct: 8529230 cggcggcggcgggaagaggatccacccgctccc 8529262 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Plus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 ||||||||||||| |||| ||||| || | || ||||| ||| ||||||||| ||||| Sbjct: 8530179 aatggatgaagctcgacaaccactatctcgcaaagttccaatttcttcaagccgaattaa 8530238 Query: 421 tccttacaggatgat 435 ||| || |||||||| Sbjct: 8530239 tccctataggatgat 8530253 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gacatcccgccggagcagca 111 |||||||||||||||||||| Sbjct: 8529180 gacatcccgccggagcagca 8529199
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 151 bits (76), Expect = 2e-33 Identities = 149/173 (86%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 191 caaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtcgcc 250 ||||||||||| |||||||||||||||||| ||| | | ||||| ||||| || || || Sbjct: 43312 caaccaagatctatggacccatccaaggatcttgctgcatacggttatggtagtgttgcg 43253 Query: 251 tggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccaggaat 310 ||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| Sbjct: 43252 tggaaggagaggatggagagctggaagcagaagcaggagaggctgcaccagatgagaaat 43193 Query: 311 ga---tggcggtaaagactggaacggngatggcgacgatgcagatctaccact 360 || ||| |||||||||||| | || ||||| || |||| |||||||||||| Sbjct: 43192 gatggtggtggtaaagactgggatggcgatggtgatgatggagatctaccact 43140 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 89 gatgacatcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaag 148 |||||||||||||||||||||||||| ||||| || || || | ||||||||||||||| Sbjct: 43496 gatgacatcccgccggagcagcatgcgcttgtgccatcttttatgggcggcgggggaaag 43437 Query: 149 aggatccacccgctcccttatgctgattccaa 180 |||||||||||||| |||||||| ||| |||| Sbjct: 43436 aggatccacccgcttccttatgcggatcccaa 43405 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 ||||||||||||||| |||||| |||||||||| || || ||||||||||| | |||||| Sbjct: 42790 aatggatgaagctaggcagccattgtccagaaaagtcccaattccttcaagtcagattaa 42731 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggt 87 ||||| |||||||| ||||||||||| |||||||| ||| |||| |||||||| Sbjct: 43641 cagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggt 43589
>gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 149 bits (75), Expect = 9e-33 Identities = 225/275 (81%) Strand = Plus / Plus Query: 41 ttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgacatcccg 100 ||||||| ||||||||||| || ||||||||||| || || ||||| ||||||||||| Sbjct: 581 ttccagctcaaccccaatgttccactcctcaccaacgggcaaatggtggatgacatccca 640 Query: 101 ccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaagaggatccacccg 160 ||||||||||| || || || ||||| ||| | || || |||||||||||||| || || Sbjct: 641 ccggagcagcacgcgctggtgccttctttcatgggtggtgggggaaagaggatacatccc 700 Query: 161 ctcccttatgctgattccaaccttcctgtgcaaccaagatccatggacccatccaaggat 220 || |||||||| ||| ||| | | ||||||||||| || || |||||||||||||||||| Sbjct: 701 cttccttatgcggatcccagcttacctgtgcaacccaggtctatggacccatccaaggat 760 Query: 221 attggttcctacgggtatgggagcgtcgcctggaaggagaggatggagagctggaagcag 280 ||| | | || |||||||| || || || |||||||| ||||||||| ||||||||| Sbjct: 761 cttgctgcatatgggtatggtagtgttgcttggaaggaacggatggagaattggaagcag 820 Query: 281 aagcaggagaggctgcatcagaccaggaatgatgg 315 | || |||||| |||| ||||| |||||||||| Sbjct: 821 agacaagagaggatgcaccagacggggaatgatgg 855 Score = 89.7 bits (45), Expect = 7e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 ||||| |||||||| ||||||||||||||||||||||| ||||| | ||||||||| || Sbjct: 866 gatggtgacgatgctgatctaccactaatggatgaagcaagacaacaactgtccaggaaa 925 Query: 395 gttcccattccttcaagcctgattaatccttacaggatgat 435 |||| |||| ||||||| ||||||||| || |||||||| Sbjct: 926 attccacttccatcaagccagattaatccatataggatgat 966
>gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 149 bits (75), Expect = 9e-33 Identities = 225/275 (81%) Strand = Plus / Plus Query: 41 ttccagccaaaccccaatgtccccctcctcaccaatggccagatggtcgatgacatcccg 100 ||||||| ||||||||||| || ||||||||||| || || ||||| ||||||||||| Sbjct: 594 ttccagctcaaccccaatgttccactcctcaccaacgggcaaatggtggatgacatccca 653 Query: 101 ccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaagaggatccacccg 160 ||||||||||| || || || ||||| ||| | || || |||||||||||||| || || Sbjct: 654 ccggagcagcacgcgctggtgccttctttcatgggtggtgggggaaagaggatacatccc 713 Query: 161 ctcccttatgctgattccaaccttcctgtgcaaccaagatccatggacccatccaaggat 220 || |||||||| ||| ||| | | ||||||||||| || || |||||||||||||||||| Sbjct: 714 cttccttatgcggatcccagcttacctgtgcaacccaggtctatggacccatccaaggat 773 Query: 221 attggttcctacgggtatgggagcgtcgcctggaaggagaggatggagagctggaagcag 280 ||| | | || |||||||| || || || |||||||| ||||||||| ||||||||| Sbjct: 774 cttgctgcatatgggtatggtagtgttgcttggaaggaacggatggagaattggaagcag 833 Query: 281 aagcaggagaggctgcatcagaccaggaatgatgg 315 | || |||||| |||| ||||| |||||||||| Sbjct: 834 agacaagagaggatgcaccagacggggaatgatgg 868 Score = 89.7 bits (45), Expect = 7e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaaag 394 ||||| |||||||| ||||||||||||||||||||||| ||||| | ||||||||| || Sbjct: 879 gatggtgacgatgctgatctaccactaatggatgaagcaagacaacaactgtccaggaaa 938 Query: 395 gttcccattccttcaagcctgattaatccttacaggatgat 435 |||| |||| ||||||| ||||||||| || |||||||| Sbjct: 939 attccacttccatcaagccagattaatccatataggatgat 979
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 141 bits (71), Expect = 2e-30 Identities = 150/176 (85%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 188 gtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtc 247 ||||||||||||||||||||||| ||||||||| | | | || ||||||||||| ||| Sbjct: 34874980 gtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagtgtc 34875039 Query: 248 gcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccagg 307 || ||||| || || ||||| |||||||||||||||||||||||| | || |||| ||| Sbjct: 34875040 gcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatgagg 34875099 Query: 308 aatgatggc---ggtaaagactggaacggngatggcgacgatgcagatctaccact 360 ||||||||| |||||||| ||| |||| |||||||| ||||||||||||||||| Sbjct: 34875100 aatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccact 34875155 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 89 gatgacatcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaag 148 ||||||||||||||||||||||| |||||||| || || ||| | |||||||| |||||| Sbjct: 34874799 gatgacatcccgccggagcagcacgcccttgtgccgtctttcatgggcggcggaggaaag 34874858 Query: 149 aggatccacccgctcccttatgctgattccaaccttcctg 188 ||||||||||| || |||||||| ||| | |||||||||| Sbjct: 34874859 aggatccaccctcttccttatgcggatccaaaccttcctg 34874898 Score = 93.7 bits (47), Expect = 5e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 |||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| | || Sbjct: 34875545 aatggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaa 34875604 Query: 421 tccttacaggatgat 435 |||||| |||||||| Sbjct: 34875605 tccttataggatgat 34875619 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 5 ggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgtcccc 64 ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| ||| Sbjct: 34874623 ggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttccc 34874682 Query: 65 ctcctcaccaa 75 ||||||||||| Sbjct: 34874683 ctcctcaccaa 34874693
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 141 bits (71), Expect = 2e-30 Identities = 150/176 (85%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 188 gtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtc 247 ||||||||||||||||||||||| ||||||||| | | | || ||||||||||| ||| Sbjct: 34965052 gtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagtgtc 34965111 Query: 248 gcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccagg 307 || ||||| || || ||||| |||||||||||||||||||||||| | || |||| ||| Sbjct: 34965112 gcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatgagg 34965171 Query: 308 aatgatggc---ggtaaagactggaacggngatggcgacgatgcagatctaccact 360 ||||||||| |||||||| ||| |||| |||||||| ||||||||||||||||| Sbjct: 34965172 aatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccact 34965227 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 89 gatgacatcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaag 148 ||||||||||||||||||||||| |||||||| || || ||| | |||||||| |||||| Sbjct: 34964871 gatgacatcccgccggagcagcacgcccttgtgccgtctttcatgggcggcggaggaaag 34964930 Query: 149 aggatccacccgctcccttatgctgattccaaccttcctg 188 ||||||||||| || |||||||| ||| | |||||||||| Sbjct: 34964931 aggatccaccctcttccttatgcggatccaaaccttcctg 34964970 Score = 93.7 bits (47), Expect = 5e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 |||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| | || Sbjct: 34965617 aatggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaa 34965676 Query: 421 tccttacaggatgat 435 |||||| |||||||| Sbjct: 34965677 tccttataggatgat 34965691 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 5 ggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgtcccc 64 ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| ||| Sbjct: 34964695 ggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttccc 34964754 Query: 65 ctcctcaccaa 75 ||||||||||| Sbjct: 34964755 ctcctcaccaa 34964765
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 141 bits (71), Expect = 2e-30 Identities = 150/176 (85%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 188 gtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtc 247 ||||||||||||||||||||||| ||||||||| | | | || ||||||||||| ||| Sbjct: 140500 gtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagtgtc 140441 Query: 248 gcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccagg 307 || ||||| || || ||||| |||||||||||||||||||||||| | || |||| ||| Sbjct: 140440 gcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatgagg 140381 Query: 308 aatgatggc---ggtaaagactggaacggngatggcgacgatgcagatctaccact 360 ||||||||| |||||||| ||| |||| |||||||| ||||||||||||||||| Sbjct: 140380 aatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccact 140325 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 89 gatgacatcccgccggagcagcatgcccttgttccttccttcgtcggcggcgggggaaag 148 ||||||||||||||||||||||| |||||||| || || ||| | |||||||| |||||| Sbjct: 140681 gatgacatcccgccggagcagcacgcccttgtgccgtctttcatgggcggcggaggaaag 140622 Query: 149 aggatccacccgctcccttatgctgattccaaccttcctg 188 ||||||||||| || |||||||| ||| | |||||||||| Sbjct: 140621 aggatccaccctcttccttatgcggatccaaaccttcctg 140582 Score = 93.7 bits (47), Expect = 5e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 |||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| | || Sbjct: 139935 aatggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaa 139876 Query: 421 tccttacaggatgat 435 |||||| |||||||| Sbjct: 139875 tccttataggatgat 139861 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 5 ggccgcggcggagacctcgacggcgtgcaccagcccttccagccaaaccccaatgtcccc 64 ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| ||| Sbjct: 140857 ggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttccc 140798 Query: 65 ctcctcaccaa 75 ||||||||||| Sbjct: 140797 ctcctcaccaa 140787
>gb|DQ020214.1| Bambusa oldhamii cellulose synthase BoCesA6 mRNA, partial cds Length = 2867 Score = 135 bits (68), Expect = 1e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 315 gcggtaaagactggaacggngatggcgacgatgcagatctaccactaatggatgaagcta 374 |||||||||||||| | || |||||||| || |||||||||||||||||||||||||| | Sbjct: 4 gcggtaaagactgggatggagatggcgatgacgcagatctaccactaatggatgaagcca 63 Query: 375 gacagccactgtccagaaaggttcccattccttcaagcctgattaatccttacag 429 |||||||| ||||||||||| |||| ||||||||||||| |||||| || ||||| Sbjct: 64 gacagccattgtccagaaagattccgattccttcaagccagattaacccctacag 118
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 109 bits (55), Expect = 8e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 188 gtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatgggagcgtc 247 |||||||| |||||||||||||| ||||||||| | | |||||||||| ||||| || Sbjct: 61843 gtgcaaccgagatccatggacccgtccaaggatctcgccgcctacgggtacgggagtgtg 61902 Query: 248 gcctggaaggagaggatggagagctggaagcagaagcaggagaggctgcatcagaccagg 307 || |||||||||||||||||| |||||||||||||||||||| || |||| ||| |||| Sbjct: 61903 gcatggaaggagaggatggagggctggaagcagaagcaggagcggatgcagcagctcagg 61962 Query: 308 aatgatggcgg 318 | ||| ||||| Sbjct: 61963 agtgagggcgg 61973 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 35 cagcccttccagccaaaccccaatgtccccctcctcaccaatggccagatggt 87 ||||| |||||||| | ||||||||| || ||||||||||||||||||||||| Sbjct: 61486 cagccgttccagcccatccccaatgtgccgctcctcaccaatggccagatggt 61538 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 133 cggcggcgggggaaagaggatccacccgctccc 165 ||||||||| || |||||||||||||||||||| Sbjct: 61698 cggcggcggcgggaagaggatccacccgctccc 61730 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Plus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 ||||||||||||| |||| ||||| || | || ||||| ||| ||||||||| ||||| Sbjct: 62647 aatggatgaagctcgacaaccactatctcgcaaagttccaatttcttcaagccgaattaa 62706 Query: 421 tccttacaggatgat 435 ||| || |||||||| Sbjct: 62707 tccctataggatgat 62721 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gacatcccgccggagcagca 111 |||||||||||||||||||| Sbjct: 61648 gacatcccgccggagcagca 61667
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3773 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 182 cttcctgtgcaaccaagatccatggacccatccaaggatattggttcctacgggtatggg 241 |||||||||||||||||||||||||| || |||||||| | | | | || || ||||| Sbjct: 659 cttcctgtgcaaccaagatccatggatccttccaaggacttggctgcttatggatatgga 718 Query: 242 agcgtcgcctggaaggagaggatggagagctggaagcagaagcagga 288 || | || ||||||||||||||||||||||||||||| || ||||| Sbjct: 719 agtattgcatggaaggagaggatggagagctggaagcaaaaacagga 765
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 233 gggtatgggagcgtcgcctggaaggagaggatggagagctggaagcagaagcagg 287 ||||| |||||| ||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 764 gggtacgggagcatcgcctggaaggagagggtggagagctggaagctgaggcagg 818
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 233 gggtatgggagcgtcgcctggaaggagaggatggagagctggaagcagaagcagg 287 ||||| |||||| ||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 791 gggtacgggagcatcgcctggaaggagagggtggagagctggaagctgaggcagg 845
>dbj|AK067386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F14, full insert sequence Length = 3221 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 361 aatggatgaagctagacagccactgtccagaaaggttcccattccttcaagcctgattaa 420 ||||||||||||||| |||||| |||||||||| || || ||||||||||| | |||||| Sbjct: 117 aatggatgaagctaggcagccattgtccagaaaagtcccaattccttcaagtcagattaa 176
>gb|DQ014510.1| Eucalyptus grandis cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3782 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 335 gatggcgacgatgcagatctaccactaatggatgaagctagacagccactgtccagaa 392 ||||| ||| || |||||||||||||||||||||| || |||||||| ||||| |||| Sbjct: 813 gatggggacaatccagatctaccactaatggatgaggcgagacagccgctgtcaagaa 870 Score = 46.1 bits (23), Expect = 0.097 Identities = 47/55 (85%) Strand = Plus / Plus Query: 236 tatgggagcgtcgcctggaaggagaggatggagagctggaagcagaagcaggaga 290 ||||| ||||| || ||||| |||||||||||||| ||||| || ||||| |||| Sbjct: 711 tatggaagcgttgcttggaaagagaggatggagagttggaaacaaaagcaagaga 765
>gb|AY639654.1| Pinus radiata cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3911 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 365 gatgaagctagacagccactgtccagaaaggttcccattccttcaagc 412 |||||||| || |||||||||||| |||| || || |||||||||||| Sbjct: 961 gatgaagcaaggcagccactgtcccgaaaagtgccaattccttcaagc 1008
>gb|AY789652.1| Pinus taeda cellulose synthase catalytic subunit (CesA3) mRNA, complete cds Length = 3959 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 365 gatgaagctagacagccactgtccagaaaggttcccattccttcaagc 412 |||||||| || |||||||||||| |||| || || |||||||||||| Sbjct: 951 gatgaagcaaggcagccactgtcccgaaaagtgccaattccttcaagc 998
>ref|XM_609498.2| PREDICTED: Bos taurus similar to Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta chain 4) (Beta-V spectrin) (BSPECV) (LOC531014), mRNA Length = 11628 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 271 ctggaagcagaagcaggagaggctgca 297 |||| |||||||||||||||||||||| Sbjct: 6453 ctgggagcagaagcaggagaggctgca 6479
>ref|XM_782574.1| PREDICTED: Strongylocentrotus purpuratus similar to vacuolar protein sorting 13D isoform 1 (LOC582630), partial mRNA Length = 459 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 aggctgcatcagaccaggaatg 311 |||||||||||||||||||||| Sbjct: 228 aggctgcatcagaccaggaatg 249
>ref|XM_781823.1| PREDICTED: Strongylocentrotus purpuratus similar to vacuolar protein sorting 13D isoform 1 (LOC581842), mRNA Length = 1533 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 aggctgcatcagaccaggaatg 311 |||||||||||||||||||||| Sbjct: 855 aggctgcatcagaccaggaatg 876
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 ggaaggagaggatggagagctg 273 |||||||||||||||||||||| Sbjct: 66135 ggaaggagaggatggagagctg 66114
>emb|CR974469.7| Zebrafish DNA sequence from clone CH73-64N5 in linkage group 22, complete sequence Length = 105360 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 accaggaatgatggcggtaaag 323 |||||||||||||||||||||| Sbjct: 75785 accaggaatgatggcggtaaag 75806
>gb|AC124473.2| Mus musculus BAC clone RP24-86K23 from chromosome 3, complete sequence Length = 185436 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 gagagctggaagcagaagcaggaga 290 ||||| ||||||||||||||||||| Sbjct: 127066 gagaggtggaagcagaagcaggaga 127042
>gb|AC130715.3| Mus musculus BAC clone RP23-460L16 from chromosome 2, complete sequence Length = 168935 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctggaaggagaggatggagag 270 ||||||||||||||||||||| Sbjct: 31874 ctggaaggagaggatggagag 31894
>gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosome 2, complete sequence Length = 183636 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctggaaggagaggatggagag 270 ||||||||||||||||||||| Sbjct: 158329 ctggaaggagaggatggagag 158349
>gb|AC156498.2| Mus musculus BAC clone RP24-300J13 from chromosome 12, complete sequence Length = 175716 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ctggaaggagaggatggagag 270 ||||||||||||||||||||| Sbjct: 147306 ctggaaggagaggatggagag 147286
>gb|AC156636.2| Mus musculus BAC clone RP24-401F19 from chromosome 12, complete sequence Length = 170370 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctggaaggagaggatggagag 270 ||||||||||||||||||||| Sbjct: 168737 ctggaaggagaggatggagag 168757
>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete sequence Length = 212028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctggaaggagaggatggagag 270 ||||||||||||||||||||| Sbjct: 130269 ctggaaggagaggatggagag 130289
>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence Length = 222889 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 gagagctggaagcagaagcaggaga 290 ||||| ||||||||||||||||||| Sbjct: 5262 gagaggtggaagcagaagcaggaga 5238
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tccaaccttcctgtgcaacc 195 |||||||||||||||||||| Sbjct: 1018335 tccaaccttcctgtgcaacc 1018316
>gb|BC014460.1| Homo sapiens cathepsin G, mRNA (cDNA clone MGC:23078 IMAGE:4859911), complete cds Length = 901 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 agcagaagcaggagaggctgcatc 299 |||||||||||||| ||||||||| Sbjct: 60 agcagaagcaggagtggctgcatc 37
>ref|XM_976856.1| PREDICTED: Mus musculus similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW) (LOC624734), mRNA Length = 264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagcagaagcaggagaggct 294 |||||||||||||||||||| Sbjct: 206 aagcagaagcaggagaggct 225
>ref|XM_889290.1| PREDICTED: Mus musculus similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW) (LOC624734), mRNA Length = 264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagcagaagcaggagaggct 294 |||||||||||||||||||| Sbjct: 206 aagcagaagcaggagaggct 225
>ref|XM_991859.1| PREDICTED: Mus musculus similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW) (LOC624734), mRNA Length = 264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagcagaagcaggagaggct 294 |||||||||||||||||||| Sbjct: 206 aagcagaagcaggagaggct 225
>gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome 6, complete sequence Length = 213811 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tccatggacccatccaagga 219 |||||||||||||||||||| Sbjct: 44414 tccatggacccatccaagga 44395
>ref|XM_571413.1| Cryptococcus neoformans var. neoformans JEC21 late endosome to vacuole transport-related protein (CNF03440) partial mRNA Length = 4940 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tccaaccttcctgtgcaacc 195 |||||||||||||||||||| Sbjct: 1060 tccaaccttcctgtgcaacc 1079
>gb|AC109153.13| Mus musculus chromosome 15, clone RP23-51J23, complete sequence Length = 222164 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ctggaaggagaggatggaga 269 |||||||||||||||||||| Sbjct: 39707 ctggaaggagaggatggaga 39726
>gb|AC109611.24| Mus musculus strain C57BL/6J clone rp23-342n8 map 5, complete sequence Length = 198992 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ggaagcagaagcaggagagg 292 |||||||||||||||||||| Sbjct: 131375 ggaagcagaagcaggagagg 131356
>gb|AC116794.11| Mus musculus chromosome 5, clone RP24-312A3, complete sequence Length = 154612 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aagcagaagcaggagaggct 294 |||||||||||||||||||| Sbjct: 18713 aagcagaagcaggagaggct 18694
>emb|AL157769.12| Human DNA sequence from clone RP11-484I6 on chromosome 13q32.3-33.3 Contains 3 novel genes, the gene for endoplasmic reticulum resident protein 58 (MGC5302), the BIVM gene for basic, immunoglobulin-like variable motif containing, the ERCC5 gene for excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome)) and 3 CpG islands, complete sequence Length = 172052 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tggaagcagaagcaggagag 291 |||||||||||||||||||| Sbjct: 39344 tggaagcagaagcaggagag 39363
>gb|AC100797.4| Homo sapiens chromosome 8, clone RP11-43A14, complete sequence Length = 200340 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gcagaagcaggagaggctgc 296 |||||||||||||||||||| Sbjct: 161088 gcagaagcaggagaggctgc 161107
>ref|NM_001911.2| Homo sapiens cathepsin G (CTSG), mRNA Length = 924 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 agcagaagcaggagaggctgcatc 299 |||||||||||||| ||||||||| Sbjct: 60 agcagaagcaggagtggctgcatc 37
>gb|AC112031.4| Rattus norvegicus BAC CH230-99K18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 242158 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gaccaggaatgatggcggtaaaga 324 ||||||||||||||| |||||||| Sbjct: 17273 gaccaggaatgatggtggtaaaga 17296
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 aaaggttcccattccttcaa 410 |||||||||||||||||||| Sbjct: 5166183 aaaggttcccattccttcaa 5166164
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 aaaggttcccattccttcaa 410 |||||||||||||||||||| Sbjct: 125221 aaaggttcccattccttcaa 125202
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 aaaggttcccattccttcaa 410 |||||||||||||||||||| Sbjct: 32905 aaaggttcccattccttcaa 32886
>emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chromosome X, complete sequence Length = 89031 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gagctggaagcagaagcagg 287 |||||||||||||||||||| Sbjct: 30570 gagctggaagcagaagcagg 30551
>emb|BX571719.3| Zebrafish DNA sequence from clone DKEY-183C2 in linkage group 4, complete sequence Length = 111614 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcccttccagccaaacccca 56 |||||||||||||||||||| Sbjct: 1098 gcccttccagccaaacccca 1117
>emb|AL136018.4|CNS01DVS Human chromosome 14 DNA sequence BAC R-104E19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173415 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 agcagaagcaggagaggctgcatc 299 |||||||||||||| ||||||||| Sbjct: 19555 agcagaagcaggagtggctgcatc 19578
>emb|X68271.1|HSMUC188 H.sapiens MUC18 gene exon 16 Length = 1781 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 257 gagaggatggagagctggaagcagaagc 284 ||||||| |||||| ||||||||||||| Sbjct: 71 gagaggaaggagagatggaagcagaagc 44
>emb|CT027608.5| Zebrafish DNA sequence from clone CH73-377O8 in linkage group 4, complete sequence Length = 8406 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gcccttccagccaaacccca 56 |||||||||||||||||||| Sbjct: 903 gcccttccagccaaacccca 884
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ggaagcagaagcaggagagg 292 |||||||||||||||||||| Sbjct: 24214 ggaagcagaagcaggagagg 24195
>gb|AC116886.6| Mus musculus chromosome 5, clone RP24-441G10, complete sequence Length = 168069 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagcagaagcaggagaggct 294 |||||||||||||||||||| Sbjct: 13555 aagcagaagcaggagaggct 13574
>emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chromosome 11, complete sequence Length = 196512 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctggaagcagaagcaggaga 290 |||||||||||||||||||| Sbjct: 192321 ctggaagcagaagcaggaga 192302
>dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R1105h09, complete sequence Length = 219574 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 257 gagaggatggagagctggaagcagaagc 284 ||||||| |||||| ||||||||||||| Sbjct: 179251 gagaggaaggagagatggaagcagaagc 179278
>gb|M16117.1|HUMCTHG Human cathepsin G mRNA, complete cds Length = 857 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 agcagaagcaggagaggctgcatc 299 |||||||||||||| ||||||||| Sbjct: 31 agcagaagcaggagtggctgcatc 8
>gb|J04990.1|HUMCAPG Human cathepsin G gene, complete cds Length = 3734 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 agcagaagcaggagaggctgcatc 299 |||||||||||||| ||||||||| Sbjct: 372 agcagaagcaggagtggctgcatc 349
>gb|AC160528.9| Mus musculus chromosome 15, clone RP23-310L8, complete sequence Length = 174502 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ctggaaggagaggatggaga 269 |||||||||||||||||||| Sbjct: 42787 ctggaaggagaggatggaga 42768 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,624,231 Number of Sequences: 3902068 Number of extensions: 4624231 Number of successful extensions: 84007 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83621 Number of HSP's gapped (non-prelim): 365 length of query: 443 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 421 effective length of database: 17,147,199,772 effective search space: 7218971104012 effective search space used: 7218971104012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
