ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14b12 |
|---|---|
| Clone Library Name | barley_pub |
>CPNE8_MOUSE (Q9DC53) Copine-8 (Copine VIII)| Length = 564 Score = 54.7 bits (130), Expect = 1e-07 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%) Frame = +2 Query: 287 STQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALE--EIGRTEVIVNSSSPSWNAKII 460 +T++E+S+S NL D++ FSKS+PI V+Y+ G E E GRTEVI N+ +P + K I Sbjct: 23 ATRVEVSVSCRNLLDRDTFSKSDPICVLYTQAVGNKEWREFGRTEVIDNTLNPDFVRKFI 82 Query: 461 LQY 469 L Y Sbjct: 83 LDY 85 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = +2 Query: 302 LSLSASNLGDQEYFSKSNPIVVVYSSN-DGALEEIGRTEVIVNSSSPSWNA 451 + A+ L +++F KS+P +V Y SN DG+ +TEV+ N+ +P W A Sbjct: 162 MQFCANKLDKKDFFGKSDPFLVFYRSNEDGSFTICHKTEVVKNTLNPVWQA 212
>CPNE8_HUMAN (Q86YQ8) Copine-8 (Copine VIII)| Length = 564 Score = 54.3 bits (129), Expect = 2e-07 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Frame = +2 Query: 287 STQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALE--EIGRTEVIVNSSSPSWNAKII 460 +T++E+S+S NL D++ FSKS+PI V+Y G E E GRTEVI N+ +P + K I Sbjct: 23 ATRVEVSVSCRNLLDRDTFSKSDPICVLYVQGVGNKEWREFGRTEVIDNTLNPDFVRKFI 82 Query: 461 LQY 469 L Y Sbjct: 83 LDY 85 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = +2 Query: 302 LSLSASNLGDQEYFSKSNPIVVVYSSN-DGALEEIGRTEVIVNSSSPSWNA 451 + A+ L +++F KS+P +V Y SN DG+ +TEV+ N+ +P W A Sbjct: 162 MQFCANKLDKKDFFGKSDPFLVFYRSNEDGSFTICHKTEVVKNTLNPVWQA 212
>CPNE4_MOUSE (Q8BLR2) Copine-4 (Copine IV)| Length = 557 Score = 52.4 bits (124), Expect = 6e-07 Identities = 22/59 (37%), Positives = 41/59 (69%), Gaps = 1/59 (1%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEE-IGRTEVIVNSSSPSWNA 451 +G +EL+ +A L D+++FSKS+P + ++ ND A ++ + RTEV++N+ SP+W + Sbjct: 151 SGNDDYVELAFNARKLDDKDFFSKSDPFLEIFRMNDDATQQLVHRTEVVMNNLSPAWKS 209 Score = 35.8 bits (81), Expect = 0.057 Identities = 16/53 (30%), Positives = 31/53 (58%) Frame = +2 Query: 290 TQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWN 448 T++EL ++ + D++ SK +P V++ + G E+ RTEVI +P ++ Sbjct: 24 TKVELRVACKGISDRDALSKPDPCVILKMQSHGQWFEVDRTEVIRTCINPVYS 76
>CPNE4_HUMAN (Q96A23) Copine-4 (Copine IV) (Copine-8)| Length = 557 Score = 52.4 bits (124), Expect = 6e-07 Identities = 22/59 (37%), Positives = 41/59 (69%), Gaps = 1/59 (1%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEE-IGRTEVIVNSSSPSWNA 451 +G +EL+ +A L D+++FSKS+P + ++ ND A ++ + RTEV++N+ SP+W + Sbjct: 151 SGNDDYVELAFNARKLDDKDFFSKSDPFLEIFRMNDDATQQLVHRTEVVMNNLSPAWKS 209 Score = 35.8 bits (81), Expect = 0.057 Identities = 16/53 (30%), Positives = 31/53 (58%) Frame = +2 Query: 290 TQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWN 448 T++EL ++ + D++ SK +P V++ + G E+ RTEVI +P ++ Sbjct: 24 TKVELRVACKGISDRDALSKPDPCVILKMQSHGQWFEVDRTEVIRTCINPVYS 76
>CPNE2_HUMAN (Q96FN4) Copine-2 (Copine II)| Length = 548 Score = 52.4 bits (124), Expect = 6e-07 Identities = 23/59 (38%), Positives = 40/59 (67%) Frame = +2 Query: 293 QIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKIILQY 469 ++ELS+S NL D++ SKS+P V+++ N+G E RTE +N+ +P+++ K +L Y Sbjct: 25 KVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDY 83 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 296 IELSLSASNLGDQEYFSKSNPIVVVYS-SNDGALEEIGRTEVIVNSSSPSW 445 I LSL+ L ++ F KS+P + Y +DG + RTEVI + P W Sbjct: 157 ITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVW 207
>CPNE5_MOUSE (Q8JZW4) Copine-5 (Copine V)| Length = 593 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 2/67 (2%) Frame = +2 Query: 275 GAGASTQIELSLSASNLGDQEYFSKSNPIVVVYSS--NDGALEEIGRTEVIVNSSSPSWN 448 G+ +T++E+++S NL D++ FSKS+P+ V+Y+ + E GRTEVI N+ +P + Sbjct: 18 GSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWREFGRTEVIDNTLNPDFV 77 Query: 449 AKIILQY 469 K I+ Y Sbjct: 78 RKFIVDY 84 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +2 Query: 302 LSLSASNLGDQEYFSKSNPIVVVYSSN-DGALEEIGRTEVIVNSSSPSW 445 + A+ L +++F KS+P +V Y SN DG +TEV+ N+ +P W Sbjct: 181 MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVW 229
>CPNE5_HUMAN (Q9HCH3) Copine-5 (Copine V)| Length = 593 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 2/67 (2%) Frame = +2 Query: 275 GAGASTQIELSLSASNLGDQEYFSKSNPIVVVYSS--NDGALEEIGRTEVIVNSSSPSWN 448 G+ +T++E+++S NL D++ FSKS+P+ V+Y+ + E GRTEVI N+ +P + Sbjct: 18 GSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWREFGRTEVIDNTLNPDFV 77 Query: 449 AKIILQY 469 K I+ Y Sbjct: 78 RKFIVDY 84 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +2 Query: 302 LSLSASNLGDQEYFSKSNPIVVVYSSN-DGALEEIGRTEVIVNSSSPSW 445 + A+ L +++F KS+P +V Y SN DG +TEV+ N+ +P W Sbjct: 181 MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVW 229
>CPNE2_MOUSE (P59108) Copine-2 (Copine II)| Length = 548 Score = 50.4 bits (119), Expect = 2e-06 Identities = 23/59 (38%), Positives = 39/59 (66%) Frame = +2 Query: 293 QIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKIILQY 469 ++ELS+S NL D++ SKS+P V++ ++G E RTE VN+ +P+++ K +L Y Sbjct: 25 KVELSVSGQNLLDRDVTSKSDPFCVLFIEDNGRWMEFDRTETAVNNLNPAFSKKFVLDY 83 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 296 IELSLSASNLGDQEYFSKSNPIVVVYS-SNDGALEEIGRTEVIVNSSSPSW 445 I LSL+ L ++ F KS+P + Y +DG + RTEVI + P W Sbjct: 157 ITLSLAGRKLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVW 207
>CPNE7_HUMAN (Q9UBL6) Copine-7 (Copine VII)| Length = 633 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDG-ALEEIGRTEVIVNSSSPSWNA 451 +G + +ELS A L D++ FSKS+P + +Y ND L+ + RTEV+ N+ +P W A Sbjct: 226 SGNNGYVELSFRARKLDDKDLFSKSDPFLELYRVNDDQGLQLVYRTEVVKNNLNPVWEA 284 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/64 (31%), Positives = 37/64 (57%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKI 457 A ++++EL LS +L D++ +KS+P V + G ++GRTEV+ +S P ++ Sbjct: 18 APCASKVELRLSCRHLLDRDPLTKSDPSVALLQQAQGQWVQVGRTEVVRSSLHPVFSKVF 77 Query: 458 ILQY 469 + Y Sbjct: 78 TVDY 81
>YGJI_CAEEL (Q9XUB9) Hypothetical protein T28F3.1 in chromosome IV| Length = 634 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 17/77 (22%) Frame = +2 Query: 290 TQIELSLSASNLGDQEYFSKSNPIVVVYSSNDG----ALEEI-------------GRTEV 418 T + L++SA+NL D + FSKS+PI ++Y G EEI GRTEV Sbjct: 15 TNVRLTISANNLMDLDVFSKSDPICLIYEKTSGRKATTTEEITVPTWKDKQWTERGRTEV 74 Query: 419 IVNSSSPSWNAKIILQY 469 ++N+ +P + +L Y Sbjct: 75 VMNNLNPQFTKTFLLPY 91
>CPNE6_HUMAN (O95741) Copine-6 (Copine VI) (Neuronal-copine) (N-copine)| Length = 557 Score = 45.1 bits (105), Expect = 9e-05 Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEE-IGRTEVIVNSSSPSW 445 +G + ++L+ A L +++ FSKS+P + +Y +N+ ++ + RTEV+ N+ +PSW Sbjct: 148 SGTNDYVQLTFRAYKLDNKDLFSKSDPFMEIYKTNEDQSDQLVWRTEVVKNNLNPSW 204 Score = 38.1 bits (87), Expect = 0.011 Identities = 19/61 (31%), Positives = 38/61 (62%) Frame = +2 Query: 287 STQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKIILQ 466 ++++EL +S L D++ +K +P V++ +D E+ RTEV+ + SSP ++ + L+ Sbjct: 19 ASRVELRVSCHGLLDRDTLTKPHPCVLLKLYSDEQWVEVERTEVLRSCSSPVFSRVLALE 78 Query: 467 Y 469 Y Sbjct: 79 Y 79
>CPNE6_MOUSE (Q9Z140) Copine-6 (Copine VI) (Neuronal-copine) (N-copine)| Length = 557 Score = 44.7 bits (104), Expect = 1e-04 Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSN-DGALEEIGRTEVIVNSSSPSW 445 +G + ++L+ A L +++ FSKS+P + +Y +N D + + + RTEV+ N+ +PSW Sbjct: 148 SGTNDYVQLTFRAHKLDNKDLFSKSDPFMEIYKTNGDQSDQLVWRTEVVKNNLNPSW 204 Score = 37.4 bits (85), Expect = 0.019 Identities = 18/61 (29%), Positives = 38/61 (62%) Frame = +2 Query: 287 STQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKIILQ 466 ++++EL +S L D++ +K +P V++ +D E+ RTEV+ + SSP ++ + ++ Sbjct: 19 ASRVELRVSCHGLLDRDTLTKPHPCVLLKLYSDEQWVEVERTEVLRSCSSPVFSRVLAIE 78 Query: 467 Y 469 Y Sbjct: 79 Y 79
>CPNE6_PONPY (Q5R4W6) Copine-6 (Copine VI)| Length = 557 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Frame = +2 Query: 278 AGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEE-IGRTEVIVNSSSPSW 445 +G + ++L+ A L +++ FSKS+P + +Y +N+ ++ + RTEV+ N+ +PSW Sbjct: 148 SGTNDYVQLTFRAYKLDNKDPFSKSDPFMEIYKTNEDQSDQLVWRTEVVKNNLNPSW 204 Score = 38.1 bits (87), Expect = 0.011 Identities = 19/61 (31%), Positives = 38/61 (62%) Frame = +2 Query: 287 STQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKIILQ 466 ++++EL +S L D++ +K +P V++ +D E+ RTEV+ + SSP ++ + L+ Sbjct: 19 ASRVELRVSCHGLLDRDTLTKPHPCVLLKLYSDEQWVEVERTEVLRSCSSPVFSRVLALE 78 Query: 467 Y 469 Y Sbjct: 79 Y 79
>CPNE1_HUMAN (Q99829) Copine-1 (Copine I)| Length = 537 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Frame = +2 Query: 290 TQIELSLSASNLGDQEYFSKSNPIVVVYSS-NDGALEEIGRTEVIVNSSSPSWNAKIILQ 466 T ++LS+S +L D++ SKS+P+ V+ G+ E+GRTE + N SSP ++ + L+ Sbjct: 6 TLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSPEFSKTLQLE 65 Query: 467 YQ 472 Y+ Sbjct: 66 YR 67 Score = 38.1 bits (87), Expect = 0.011 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = +2 Query: 296 IELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSW 445 + + + A NL +++ KS+P + + DG + R+EVI N+ +P+W Sbjct: 140 VTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTW 189
>CPNE1_MOUSE (Q8C166) Copine-1 (Copine I)| Length = 536 Score = 43.9 bits (102), Expect = 2e-04 Identities = 22/60 (36%), Positives = 38/60 (63%) Frame = +2 Query: 290 TQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKIILQY 469 T ++LS+S +L D++ SKS+P+ V+ GA E+ RTE + N SSP ++ + ++Y Sbjct: 6 TLVQLSVSCEHLIDKDIGSKSDPLCVLLQDVGGAWAELCRTERVRNCSSPEFSKTLQIEY 65 Score = 38.9 bits (89), Expect = 0.007 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = +2 Query: 287 STQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSW 445 S + + + A NL +++ KS+P + + DG + RTEV+ N+ +P+W Sbjct: 136 SRVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWQLAYRTEVVKNNLNPTW 188
>CPNE3_MOUSE (Q8BT60) Copine-3 (Copine III)| Length = 533 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Frame = +2 Query: 290 TQIELSLSASNLGDQEYFSKSNPIVVVYSSNDG-ALEEIGRTEVIVNSSSPSWNAKIILQ 466 T++EL++S +NL D + SKS+P+ V++ + G E+ RTE I NS +P ++ ++ Sbjct: 7 TKVELNVSCNNLLDADVTSKSDPLCVLFLNTSGHQWYEVERTERIKNSLNPKFSKTFVID 66 Query: 467 Y 469 Y Sbjct: 67 Y 67 Score = 32.0 bits (71), Expect = 0.82 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +2 Query: 308 LSASNLGDQEYFSKSNPIVVVYS-SNDGALEEIGRTEVIVNSSSPSW 445 + A L +++ F KS+P + + ++DG + RTEVI N+ +P W Sbjct: 145 MEARKLDNKDLFGKSDPYLEFHKQTSDGHWLMVHRTEVIKNNLNPMW 191
>CPNE3_HUMAN (O75131) Copine-3 (Copine III)| Length = 537 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +2 Query: 308 LSASNLGDQEYFSKSNPIVVVYS-SNDGALEEIGRTEVIVNSSSPSW 445 + A L +++ F KS+P + + ++DG + RTEV+ N+ +P W Sbjct: 145 MEARKLDNKDLFGKSDPYLEFHKQTSDGNWLMVHRTEVVKNNLNPVW 191
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 308 LSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTEVIVNSSSPSWNAKII 460 L A NL ++ S+P V VY E RT+ + S +P WN +I Sbjct: 4585 LQARNLVPRDNNGYSDPFVKVYLLPGRGAEYKRRTKHVQKSLNPEWNQTVI 4635
>ATX1_RAT (Q63540) Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)| Length = 789 Score = 28.5 bits (62), Expect = 9.1 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = +2 Query: 266 RSRGAGASTQIELSLSASNLGDQEYFSKSNPIVV-----VYSSNDGALEEIGRTEVIVNS 430 +SR GAS+ +ELSL ++ + +S +VV YSS D + G V+ NS Sbjct: 304 KSRRYGASSSVELSLGKTSSKSVPHPYESRHVVVHPSPADYSSRDTSGVR-GSVMVLPNS 362 Query: 431 SSPS 442 S+PS Sbjct: 363 STPS 366
>TPSA_ASPNG (Q00075) Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1| (EC 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase) Length = 517 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -1 Query: 166 HGVLLLSRFAGEARSIRVSI 107 HGVL+LS FAG A+S+ SI Sbjct: 404 HGVLVLSEFAGAAQSLNGSI 423
>MOTY_VIBPA (P46233) Sodium-type flagellar protein motY precursor| Length = 293 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 256 SLPPFPWRRGIHADRVISL 312 S+PP PWR G HADR+ +L Sbjct: 90 SMPP-PWRPGEHADRITNL 107
>CPNE3_PONPY (Q5RAE1) Copine-3 (Copine III)| Length = 537 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +2 Query: 308 LSASNLGDQEYFSKSNPIVVVYS-SNDGALEEIGRTEVIVNSSSPSW 445 + A +++ F KS+P + + ++DG + RTEV+ N+ +P W Sbjct: 145 MEARKPDNKDLFGKSDPYLEFHKQTSDGNWLMVHRTEVVKNNLNPVW 191
>LPSZ_RHIME (P31858) Lipopolysaccharide-processing protein lpsZ (Polysaccharide| chain length determinant protein) Length = 440 Score = 28.5 bits (62), Expect = 9.1 Identities = 21/52 (40%), Positives = 26/52 (50%) Frame = +2 Query: 260 FLRSRGAGASTQIELSLSASNLGDQEYFSKSNPIVVVYSSNDGALEEIGRTE 415 FLRS G GA + LSL+ G YF S P S+ + + EIG TE Sbjct: 151 FLRSVGLGAQHVLPLSLAVDTTG--IYFDPSRP-----STLETLISEIGVTE 195
>ATX1_MOUSE (P54254) Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)| Length = 792 Score = 28.5 bits (62), Expect = 9.1 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = +2 Query: 266 RSRGAGASTQIELSLSASNLGDQEYFSKSNPIVV-----VYSSNDGALEEIGRTEVIVNS 430 +SR GAS+ +ELSL ++ + +S +VV YSS D + G V+ NS Sbjct: 306 KSRRYGASSSVELSLGKASSKSVPHPYESRHVVVHPSPADYSSRDTSGVR-GSVMVLPNS 364 Query: 431 SSPS 442 S+PS Sbjct: 365 STPS 368 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,845,168 Number of Sequences: 219361 Number of extensions: 1091905 Number of successful extensions: 3633 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3617 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
