ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466003.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
2dbj|AK120851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
4dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
5ref|NM_127403.1| Arabidopsis thaliana ATP binding / protein kina... 46 0.10
6gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map... 46 0.10
7gb|AC006135.3| Arabidopsis thaliana chromosome 2 clone F24H14 ma... 46 0.10
8gb|L36525.1|MCVCPB Cucumber mosaic virus coat protein (CP) gene,... 46 0.10
9gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genom... 44 0.41
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.41
11gb|AY560555.1| Cucumber mosaic virus isolate 30RS coat protein g... 44 0.41
12gb|DQ152254.1| Cucumber mosaic virus strain banana coat protein ... 44 0.41
13gb|AY374327.1| Cucumber mosaic virus coat protein gene, complete... 44 0.41
14emb|AJ810261.1| Cucumber mosaic Virus cp gene for coat protein, ... 44 0.41
15emb|AJ810259.1| Cucumber mosaic Virus cp gene for coat protein, ... 44 0.41
16gb|DQ028777.2| Cucumber mosaic virus coat protein gene, complete... 44 0.41
17emb|AJ585520.1| Cucumber mosaic virus 3a gene for movement prote... 44 0.41
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
19gb|AF350450.1|AF350450 Cucumber mosaic virus coat protein gene, ... 44 0.41
20gb|AF268599.1|AF268599 Cucumber mosaic virus 3A protein and coat... 44 0.41
21gb|AF281864.1|AF281864 Cucumber mosaic virus coat protein mRNA, ... 44 0.41
22emb|AJ296154.1|CMO296154 Cucumber mosaic cucumovirus 3a gene for... 44 0.41
23emb|X77855.1|CMVCOATP Cucumber Mosaic Virus (As) RNA4 mRNA for c... 44 0.41
24emb|X89652.1|CMVCPGENE Cucumber Mosaic Virus (CMV) RNA for capsi... 44 0.41
25gb|AF198622.2|AF198622 Cucumber mosaic virus coat protein (3b) g... 44 0.41
26dbj|D10545.1|MCVCPP6 Cucumber mosaic virus (CMV-P6) coat protein... 44 0.41
27gb|AY861408.1| Cucumber mosaic virus isolate Temeharo4 coat prot... 44 0.41
28gb|AF013291.1|AF013291 Cucumber mosaic virus cell-to-cell moveme... 44 0.41
29gb|M98501.1|MCVCPAC Cucumber Mosaic Virus coat protein (CP) RNA,... 44 0.41
30gb|M98500.1|MCVCPAB Cucumber Mosaic Virus coat protein (CP) RNA,... 44 0.41
31gb|M98499.1|MCVCPAA Cucumber Mosaic Virus coat protein (CP) RNA,... 44 0.41
32dbj|D10539.1|MCVCP3A2 Cucumber mosaic virus (M-CMV) RNA 3, compl... 44 0.41
33ref|NM_120812.2| Arabidopsis thaliana BON2 (BONZAI 2) AT5G07300 ... 42 1.6
34gb|AY788906.1| Arabidopsis thaliana BON2 mRNA, complete cds 42 1.6
35gb|BT010130.1| Arabidopsis thaliana At5g07300/T2I1_10 gene, comp... 42 1.6
36gb|AF389301.1|AF389301 Arabidopsis thaliana AT5g07300/T2I1_10 mR... 42 1.6
37emb|BX829953.1|CNS0A080 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
38emb|BX829485.1|CNS0A08C Arabidopsis thaliana Full-length cDNA Co... 42 1.6
39emb|BX831620.1|CNS09ZW7 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
40gb|AY741135.1| Arabidopsis thaliana BON2 mRNA, complete cds 42 1.6
41ref|XM_521063.1| PREDICTED: Pan troglodytes similar to cyclin B3... 40 6.4
42ref|XM_478526.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
43gb|AF025675.1| Schistosoma mansoni SR2 subfamily A non-LTR retro... 40 6.4
44gb|AF025674.1| Schistosoma mansoni SR2 subfamily A non-LTR retro... 40 6.4
45gb|AF025679.2| Schistosoma mansoni clone pSmPf5 SR2 subfamily B ... 40 6.4
46gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 6.4
47gb|AF025681.2| Schistosoma mansoni clone pSmPf6 SR2 subfamily A ... 40 6.4
48gb|AF025672.2| Synthetic construct, reconstruction of a Schistos... 40 6.4
49gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 40 6.4
50gb|AC125275.8| Mus musculus chromosome 7, clone RP24-165E9, comp... 40 6.4
51ref|XM_838078.1| Leishmania major strain Friedlin hypothetical p... 40 6.4
52emb|BX908387.8| Zebrafish DNA sequence from clone DKEY-45B6 in l... 40 6.4
53gb|AC101879.8| Mus musculus chromosome 7, clone RP23-378H21, com... 40 6.4
54gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence 40 6.4
55emb|AL591367.5| Human DNA sequence from clone RP11-805H4 on chro... 40 6.4
56gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 40 6.4
57gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 6.4
58emb|AJ416458.1|HSA416458 Homo sapiens mRNA for cyclin B3 (CCNB3 ... 40 6.4
59emb|AJ314764.1|HSA314764 Homo sapiens mRNA for cyclin B3 (CCNB3 ... 40 6.4
60gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence 40 6.4
61ref|NM_033031.2| Homo sapiens cyclin B3 (CCNB3), transcript vari... 40 6.4
62dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.4
63dbj|AK086316.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 6.4
64dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
65ref|XM_577579.1| PREDICTED: Rattus norvegicus zinc finger protei... 40 6.4
66dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
67dbj|AK106487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
68gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.4 
>ref|XM_466003.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2626

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/194 (85%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                       
Query: 230 gcggatgccgcttccgccgcggctgatcgcttcctccgttcccgtggcgccggggcatcc 289
           ||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||| || |||
Sbjct: 343 gcggaggccgcgtccgccgcggccgaccgcttcctccgctcccgcggcgccggcgcgtcc 402

                                                                       
Query: 290 acgcagatcgagttatctctctctgcatcaaatttgggggatcaagaatatttctccaag 349
           |||||| ||||||||||||||||||||||||||||||| || |||||||  ||  |||||
Sbjct: 403 acgcaggtcgagttatctctctctgcatcaaatttgggcgaccaagaattctttaccaag 462

                                                                       
Query: 350 agcaatcccatagtcgttgtgtattc---gagcaatgacggagcgcttgaagaaatcggg 406
           ||||||||||| ||| |||| |||||    ||||| || ||||| ||||||||| | |||
Sbjct: 463 agcaatcccatggtcattgtatattctaaaagcaaagaaggagcacttgaagaacttggg 522

                         
Query: 407 cgcactgaagtaat 420
           || |||||||||||
Sbjct: 523 cgtactgaagtaat 536



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 16  aagtatccgcgtcgtctccacgactccacttgct 49
           |||| |||| ||||||||||||||||||||||||
Sbjct: 105 aagtctccgtgtcgtctccacgactccacttgct 138



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 161 gccatggggaactgctgctctgacgagat 189
           |||||||||||||||||||| ||||||||
Sbjct: 247 gccatggggaactgctgctccgacgagat 275



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 197 ggccgccactccgtcggccccgc 219
           |||||||||||||||||||||||
Sbjct: 298 ggccgccactccgtcggccccgc 320
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>dbj|AK120851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M23, full
           insert sequence
          Length = 2625

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/194 (85%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                       
Query: 230 gcggatgccgcttccgccgcggctgatcgcttcctccgttcccgtggcgccggggcatcc 289
           ||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||| || |||
Sbjct: 343 gcggaggccgcgtccgccgcggccgaccgcttcctccgctcccgcggcgccggcgcgtcc 402

                                                                       
Query: 290 acgcagatcgagttatctctctctgcatcaaatttgggggatcaagaatatttctccaag 349
           |||||| ||||||||||||||||||||||||||||||| || |||||||  ||  |||||
Sbjct: 403 acgcaggtcgagttatctctctctgcatcaaatttgggcgaccaagaattctttaccaag 462

                                                                       
Query: 350 agcaatcccatagtcgttgtgtattc---gagcaatgacggagcgcttgaagaaatcggg 406
           ||||||||||| ||| |||| |||||    ||||| || ||||| ||||||||| | |||
Sbjct: 463 agcaatcccatggtcattgtatattctaaaagcaaagaaggagcacttgaagaacttggg 522

                         
Query: 407 cgcactgaagtaat 420
           || |||||||||||
Sbjct: 523 cgtactgaagtaat 536



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 16  aagtatccgcgtcgtctccacgactccacttgct 49
           |||| |||| ||||||||||||||||||||||||
Sbjct: 105 aagtctccgtgtcgtctccacgactccacttgct 138



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 161 gccatggggaactgctgctctgacgagat 189
           |||||||||||||||||||| ||||||||
Sbjct: 247 gccatggggaactgctgctccgacgagat 275



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 197 ggccgccactccgtcggccccgc 219
           |||||||||||||||||||||||
Sbjct: 298 ggccgccactccgtcggccccgc 320
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 230      gcggatgccgcttccgccgcggctgatcgcttcctccgttcccgtggcgccggggcatcc 289
                ||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||| || |||
Sbjct: 19020132 gcggaggccgcgtccgccgcggccgaccgcttcctccgctcccgcggcgccggcgcgtcc 19020073

                            
Query: 290      acgcagatcgag 301
                |||||| |||||
Sbjct: 19020072 acgcaggtcgag 19020061



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 300      agttatctctctctgcatcaaatttgggggatcaagaat 338
                |||||||||||||||||||||||||||| || |||||||
Sbjct: 19019252 agttatctctctctgcatcaaatttgggcgaccaagaat 19019214



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 16       aagtatccgcgtcgtctccacgactccacttgct 49
                |||| |||| ||||||||||||||||||||||||
Sbjct: 19020370 aagtctccgtgtcgtctccacgactccacttgct 19020337



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 161      gccatggggaactgctgctctgacgagat 189
                |||||||||||||||||||| ||||||||
Sbjct: 19020228 gccatggggaactgctgctccgacgagat 19020200



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 197      ggccgccactccgtcggccccgc 219
                |||||||||||||||||||||||
Sbjct: 19020177 ggccgccactccgtcggccccgc 19020155



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 63/76 (82%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                            
Query: 348      agagcaatcccatagtcgttgtgtattcga---gcaatgacggagcgcttgaagaaatcg 404
                ||||||||||||| ||| |||| ||||| |   |||| || ||||| ||||||||| | |
Sbjct: 19018133 agagcaatcccatggtcattgtatattctaaaagcaaagaaggagcacttgaagaacttg 19018074

                                
Query: 405      ggcgcactgaagtaat 420
                |||| |||||||||||
Sbjct: 19018073 ggcgtactgaagtaat 19018058
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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0047A17
          Length = 149142

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 230   gcggatgccgcttccgccgcggctgatcgcttcctccgttcccgtggcgccggggcatcc 289
             ||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||| || |||
Sbjct: 25653 gcggaggccgcgtccgccgcggccgaccgcttcctccgctcccgcggcgccggcgcgtcc 25594

                         
Query: 290   acgcagatcgag 301
             |||||| |||||
Sbjct: 25593 acgcaggtcgag 25582



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 300   agttatctctctctgcatcaaatttgggggatcaagaat 338
             |||||||||||||||||||||||||||| || |||||||
Sbjct: 24773 agttatctctctctgcatcaaatttgggcgaccaagaat 24735



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 16    aagtatccgcgtcgtctccacgactccacttgct 49
             |||| |||| ||||||||||||||||||||||||
Sbjct: 25891 aagtctccgtgtcgtctccacgactccacttgct 25858



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 161   gccatggggaactgctgctctgacgagat 189
             |||||||||||||||||||| ||||||||
Sbjct: 25749 gccatggggaactgctgctccgacgagat 25721



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 197   ggccgccactccgtcggccccgc 219
             |||||||||||||||||||||||
Sbjct: 25698 ggccgccactccgtcggccccgc 25676



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 63/76 (82%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                         
Query: 348   agagcaatcccatagtcgttgtgtattcga---gcaatgacggagcgcttgaagaaatcg 404
             ||||||||||||| ||| |||| ||||| |   |||| || ||||| ||||||||| | |
Sbjct: 23654 agagcaatcccatggtcattgtatattctaaaagcaaagaaggagcacttgaagaacttg 23595

                             
Query: 405   ggcgcactgaagtaat 420
             |||| |||||||||||
Sbjct: 23594 ggcgtactgaagtaat 23579
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>ref|NM_127403.1| Arabidopsis thaliana ATP binding / protein kinase/ protein
           serine/threonine kinase/ protein-tyrosine kinase
           AT2G18470 mRNA, complete cds
          Length = 1902

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 216 ccgcctcctcctccgcggatgcc 238
           |||||||||||||||||||||||
Sbjct: 694 ccgcctcctcctccgcggatgcc 716
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>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
            sequence
          Length = 92861

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 216  ccgcctcctcctccgcggatgcc 238
            |||||||||||||||||||||||
Sbjct: 8458 ccgcctcctcctccgcggatgcc 8480
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>gb|AC006135.3| Arabidopsis thaliana chromosome 2 clone F24H14 map CIC06E08, complete
             sequence
          Length = 82356

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 216   ccgcctcctcctccgcggatgcc 238
             |||||||||||||||||||||||
Sbjct: 79436 ccgcctcctcctccgcggatgcc 79458
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>gb|L36525.1|MCVCPB Cucumber mosaic virus coat protein (CP) gene, complete cds
          Length = 894

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 216 ccgcctcctcctccgcggatgcc 238
           |||||||||||||||||||||||
Sbjct: 172 ccgcctcctcctccgcggatgcc 194
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>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete
             sequence
          Length = 167239

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 211   cggccccgcctcctcctccgcg 232
             ||||||||||||||||||||||
Sbjct: 78959 cggccccgcctcctcctccgcg 78980
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 211      cggccccgcctcctcctccgcg 232
                ||||||||||||||||||||||
Sbjct: 21006319 cggccccgcctcctcctccgcg 21006298



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 212      ggccccgcctcctcctccgc 231
                ||||||||||||||||||||
Sbjct: 32356227 ggccccgcctcctcctccgc 32356246
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>gb|AY560555.1| Cucumber mosaic virus isolate 30RS coat protein gene, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|DQ152254.1| Cucumber mosaic virus strain banana coat protein gene, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|AY374327.1| Cucumber mosaic virus coat protein gene, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>emb|AJ810261.1| Cucumber mosaic Virus cp gene for coat protein, genomic RNA,
           isolate CN03
          Length = 773

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>emb|AJ810259.1| Cucumber mosaic Virus cp gene for coat protein, genomic RNA,
           isolate KS44
          Length = 773

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|DQ028777.2| Cucumber mosaic virus coat protein gene, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>emb|AJ585520.1| Cucumber mosaic virus 3a gene for movement protein and cp gene for
            coat protein, genomic RNA, strain 242
          Length = 2208

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 216  ccgcctcctcctccgcggatgc 237
            ||||||||||||||||||||||
Sbjct: 1316 ccgcctcctcctccgcggatgc 1337
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 211      cggccccgcctcctcctccgcg 232
                ||||||||||||||||||||||
Sbjct: 20999348 cggccccgcctcctcctccgcg 20999327



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 212      ggccccgcctcctcctccgc 231
                ||||||||||||||||||||
Sbjct: 32446737 ggccccgcctcctcctccgc 32446756
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>gb|AF350450.1|AF350450 Cucumber mosaic virus coat protein gene, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|AF268599.1|AF268599 Cucumber mosaic virus 3A protein and coat protein genes, complete cds
          Length = 2215

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 216  ccgcctcctcctccgcggatgc 237
            ||||||||||||||||||||||
Sbjct: 1325 ccgcctcctcctccgcggatgc 1346
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>gb|AF281864.1|AF281864 Cucumber mosaic virus coat protein mRNA, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>emb|AJ296154.1|CMO296154 Cucumber mosaic cucumovirus 3a gene for movement protein and cp gene
            for coat protein, genomic RNA
          Length = 2226

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 216  ccgcctcctcctccgcggatgc 237
            ||||||||||||||||||||||
Sbjct: 1326 ccgcctcctcctccgcggatgc 1347
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>emb|X77855.1|CMVCOATP Cucumber Mosaic Virus (As) RNA4 mRNA for coat protein
          Length = 1043

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 141 ccgcctcctcctccgcggatgc 162
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>emb|X89652.1|CMVCPGENE Cucumber Mosaic Virus (CMV) RNA for capsid protein gene
          Length = 880

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 231 ccgcctcctcctccgcggatgc 252
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>gb|AF198622.2|AF198622 Cucumber mosaic virus coat protein (3b) gene, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>dbj|D10545.1|MCVCPP6 Cucumber mosaic virus (CMV-P6) coat protein, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|AY861408.1| Cucumber mosaic virus isolate Temeharo4 coat protein (CP) gene,
           partial cds
          Length = 619

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 29  ccgcctcctcctccgcggatgc 50
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>gb|AF013291.1|AF013291 Cucumber mosaic virus cell-to-cell movement protein 3a gene, complete
            cds
          Length = 2230

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 216  ccgcctcctcctccgcggatgc 237
            ||||||||||||||||||||||
Sbjct: 1328 ccgcctcctcctccgcggatgc 1349
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>gb|M98501.1|MCVCPAC Cucumber Mosaic Virus coat protein (CP) RNA, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|M98500.1|MCVCPAB Cucumber Mosaic Virus coat protein (CP) RNA, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>gb|M98499.1|MCVCPAA Cucumber Mosaic Virus coat protein (CP) RNA, complete cds
          Length = 657

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 216 ccgcctcctcctccgcggatgc 237
           ||||||||||||||||||||||
Sbjct: 68  ccgcctcctcctccgcggatgc 89
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>dbj|D10539.1|MCVCP3A2 Cucumber mosaic virus (M-CMV) RNA 3, complete genome
          Length = 2215

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 216  ccgcctcctcctccgcggatgc 237
            ||||||||||||||||||||||
Sbjct: 1324 ccgcctcctcctccgcggatgc 1345
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>ref|NM_120812.2| Arabidopsis thaliana BON2 (BONZAI 2) AT5G07300 (BON2) mRNA,
           complete cds
          Length = 2024

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 177 cagatcgagttatctttctctgcttccaatttg 209
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>gb|AY788906.1| Arabidopsis thaliana BON2 mRNA, complete cds
          Length = 1761

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 142 cagatcgagttatctttctctgcttccaatttg 174
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>gb|BT010130.1| Arabidopsis thaliana At5g07300/T2I1_10 gene, complete cds
          Length = 1761

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 142 cagatcgagttatctttctctgcttccaatttg 174
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>gb|AF389301.1|AF389301 Arabidopsis thaliana AT5g07300/T2I1_10 mRNA, complete cds
          Length = 2015

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 177 cagatcgagttatctttctctgcttccaatttg 209
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>emb|BX829953.1|CNS0A080 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZE03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1943

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 160 cagatcgagttatctttctctgcttccaatttg 192
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>emb|BX829485.1|CNS0A08C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB16ZF11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1966

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 159 cagatcgagttatctttctctgcttccaatttg 191
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>emb|BX831620.1|CNS09ZW7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH19ZE12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1960

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 155 cagatcgagttatctttctctgcttccaatttg 187
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>gb|AY741135.1| Arabidopsis thaliana BON2 mRNA, complete cds
          Length = 2011

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 293 cagatcgagttatctctctctgcatcaaatttg 325
           ||||||||||||||| ||||||| || ||||||
Sbjct: 251 cagatcgagttatctttctctgcttccaatttg 283
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>ref|XM_521063.1| PREDICTED: Pan troglodytes similar to cyclin B3 isoform 3
            (LOC465635), mRNA
          Length = 3846

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  aatttgggggatcaagaatatttc 343
            ||||||||||||||||||| ||||
Sbjct: 3159 aatttgggggatcaagaatgtttc 3136
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>ref|XM_478526.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 cgcctcctcctccgcggatgccgc 240
           ||||||||||||| ||||||||||
Sbjct: 102 cgcctcctcctcctcggatgccgc 125
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>gb|AF025675.1| Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon,
           reverse transcriptase (pol) pseudogene, partial cds
          Length = 2596

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 60  ctgctgctaccatcccattagcacgctc 87
           |||||||| ||||| |||||||||||||
Sbjct: 579 ctgctgcttccatctcattagcacgctc 552
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>gb|AF025674.1| Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon
           containing an insertion of a SR2 subfamily B non-LTR
           retrotransposon
          Length = 3319

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 60  ctgctgctaccatcccattagcacgctc 87
           |||||||| ||||| |||||||||||||
Sbjct: 962 ctgctgcttccatctcattagcacgctc 935
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>gb|AF025679.2| Schistosoma mansoni clone pSmPf5 SR2 subfamily B non-LTR
            retrotransposon within SR2 subfamily B non-LTR
            retrotransposon
          Length = 3687

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 60   ctgctgctaccatcccattagcacgctc 87
            |||||||| ||||| |||||||||||||
Sbjct: 2640 ctgctgcttccatctcattagcacgctc 2613
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    cgcggctgatcgcttcctcc 266
              ||||||||||||||||||||
Sbjct: 297497 cgcggctgatcgcttcctcc 297478
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>gb|AF025681.2| Schistosoma mansoni clone pSmPf6 SR2 subfamily A non-LTR
            retrotransposon unknown gene and pol pseudogene, complete
            sequence
          Length = 3652

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 60   ctgctgctaccatcccattagcacgctc 87
            |||||||| ||||| |||||||||||||
Sbjct: 1589 ctgctgcttccatctcattagcacgctc 1562
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>gb|AF025672.2| Synthetic construct, reconstruction of a Schistosoma mansoni SR2
            subfamily A non-LTR retrotransposon, complete sequence
          Length = 3913

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 60   ctgctgctaccatcccattagcacgctc 87
            |||||||| ||||| |||||||||||||
Sbjct: 1935 ctgctgcttccatctcattagcacgctc 1908
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence,
            complete sequence
          Length = 145507

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  ggccccgcctcctcctccgc 231
            ||||||||||||||||||||
Sbjct: 8355 ggccccgcctcctcctccgc 8374
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>gb|AC125275.8| Mus musculus chromosome 7, clone RP24-165E9, complete sequence
          Length = 218429

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    cacgctctcctttctctctt 100
             ||||||||||||||||||||
Sbjct: 97598 cacgctctcctttctctctt 97617
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>ref|XM_838078.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0994)
           partial mRNA
          Length = 1137

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 cgcggctgatcgcttcctcc 266
           ||||||||||||||||||||
Sbjct: 853 cgcggctgatcgcttcctcc 834
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>emb|BX908387.8| Zebrafish DNA sequence from clone DKEY-45B6 in linkage group 3, complete
              sequence
          Length = 212624

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    ggccccgcctcctcctccgc 231
              ||||||||||||||||||||
Sbjct: 167885 ggccccgcctcctcctccgc 167904
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>gb|AC101879.8| Mus musculus chromosome 7, clone RP23-378H21, complete sequence
          Length = 174481

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    cacgctctcctttctctctt 100
             ||||||||||||||||||||
Sbjct: 37241 cacgctctcctttctctctt 37222
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>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence
          Length = 180971

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   cggccccgcctcctcctccg 230
             ||||||||||||||||||||
Sbjct: 15721 cggccccgcctcctcctccg 15740
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>emb|AL591367.5| Human DNA sequence from clone RP11-805H4 on chromosome X Contains the
             3' end of the CCNB3 gene for cyclin B3 and a novel gene,
             complete sequence
          Length = 96398

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 320   aatttgggggatcaagaatatttc 343
             ||||||||||||||||||| ||||
Sbjct: 17789 aatttgggggatcaagaatgtttc 17766
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ggccccgcctcctcctccgc 231
             ||||||||||||||||||||
Sbjct: 89994 ggccccgcctcctcctccgc 90013
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    cgcttgaagaaatcgggcgc 409
              ||||||||||||||||||||
Sbjct: 224374 cgcttgaagaaatcgggcgc 224355
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>emb|AJ416458.1|HSA416458 Homo sapiens mRNA for cyclin B3 (CCNB3 gene)
          Length = 4540

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  aatttgggggatcaagaatatttc 343
            ||||||||||||||||||| ||||
Sbjct: 3289 aatttgggggatcaagaatgtttc 3266
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>emb|AJ314764.1|HSA314764 Homo sapiens mRNA for cyclin B3 (CCNB3 gene)
          Length = 4513

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  aatttgggggatcaagaatatttc 343
            ||||||||||||||||||| ||||
Sbjct: 3277 aatttgggggatcaagaatgtttc 3254
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>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cggccccgcctcctcctccg 230
             ||||||||||||||||||||
Sbjct: 54959 cggccccgcctcctcctccg 54940
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>ref|NM_033031.2| Homo sapiens cyclin B3 (CCNB3), transcript variant 3, mRNA
          Length = 4524

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  aatttgggggatcaagaatatttc 343
            ||||||||||||||||||| ||||
Sbjct: 3273 aatttgggggatcaagaatgtttc 3250
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     ggcaccggccgccactccgtcggc 214
               |||||||| |||||||||||||||
Sbjct: 3311575 ggcaccggtcgccactccgtcggc 3311598
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>dbj|AK086316.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930020L01 product:hypothetical protein,
           full insert sequence
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  cacgctctcctttctctctt 100
           ||||||||||||||||||||
Sbjct: 48  cacgctctcctttctctctt 67
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 217      cgcctcctcctccgcggatgccgc 240
                ||||||||||||| ||||||||||
Sbjct: 20727354 cgcctcctcctcctcggatgccgc 20727377
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>ref|XM_577579.1| PREDICTED: Rattus norvegicus zinc finger protein 8 (Azf8), mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 aagcgggagagcagaaggac 160
           ||||||||||||||||||||
Sbjct: 659 aagcgggagagcagaaggac 678
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>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0681F05
          Length = 144741

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   cgcctcctcctccgcggatgccgc 240
             ||||||||||||| ||||||||||
Sbjct: 80104 cgcctcctcctcctcggatgccgc 80127
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>dbj|AK106487.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H09, full
           insert sequence
          Length = 1471

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 ggccccgcctcctcctccgc 231
           ||||||||||||||||||||
Sbjct: 488 ggccccgcctcctcctccgc 469
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     ggcaccggccgccactccgtcggc 214
               |||||||| |||||||||||||||
Sbjct: 3307723 ggcaccggtcgccactccgtcggc 3307746


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,066,518
Number of Sequences: 3902068
Number of extensions: 4066518
Number of successful extensions: 74942
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74409
Number of HSP's gapped (non-prelim): 529
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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