>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2|
          Length = 989

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 110 AATQRRTTNPKGEAIAETESKRNSERSAGW*EAEEKGRNP 229
           A  ++     K  A AE E+K    ++AG  E EEK R P
Sbjct: 273 ALKEKEKAEAKARAKAEKEAKAAQAKTAGAAEGEEKTRRP 312

>HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 690

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 110 AATQRRTTNPKGEAIAETESKRNSERSAGW*EAEEKGRNPRILTHPHGEGPL 265
           A T+ RT NP    +A + +  N +  AGW +A       R++ H +   PL
Sbjct: 150 AITRARTLNPSVRIVALSATLSNMDEIAGWLDA-------RVVEHDYRPVPL 194

>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro|
           aminopeptidase 2) (Membrane-bound aminopeptidase P)
           (Membrane-bound APP) (Membrane-bound AmP) (mAmP)
           (Aminoacylproline aminopeptidase)
          Length = 674

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 252 ARVHWGCARICLNACACGGG 311
           AR HWGC    +  CAC  G
Sbjct: 2   ARAHWGCCPWLVLLCACAWG 21

>LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage protein 10)|
          Length = 982

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 98  LLLPAATQRRTTNPKGEAIAETESKRNSERSAGW*EAEEKGR 223
           LL+P +T    T   G+ I +++S  NS+ SAG  E  E+ R
Sbjct: 180 LLVPTSTSSDVTI--GDVIEKSDSPENSQESAGGEEKSEEKR 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.133    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,121,047
Number of Sequences: 219361
Number of extensions: 425144
Number of successful extensions: 1072
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)