ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14b06 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 139 bits (349), Expect = 5e-33 Identities = 74/91 (81%), Positives = 74/91 (81%) Frame = +1 Query: 214 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 393 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 394 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS Sbjct: 61 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 91 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 355 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 + Q++V+G + +L + + + G LG E KNL L G+ Sbjct: 445 YDAQISVFGSKLQNKLEEAKIFMVGSGALGCEFLKNLALMGI 486
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 136 bits (343), Expect = 3e-32 Identities = 73/91 (80%), Positives = 73/91 (80%) Frame = +1 Query: 214 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 393 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 394 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 K LFGSNVLVSGLQGLGAEIAKNLVLAGVKS Sbjct: 61 KPLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 91 Score = 30.0 bits (66), Expect = 3.4 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +1 Query: 355 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 + Q++V+G +L + + + G LG E KNL L G+ Sbjct: 445 YDAQISVFGSTLQNKLEEAKIFMVGSGALGCEFLKNLALMGI 486
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 89.4 bits (220), Expect = 5e-18 Identities = 45/50 (90%), Positives = 47/50 (94%) Frame = +1 Query: 337 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLGAEIAKNL LAGVKS Sbjct: 45 EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVKS 94 Score = 34.3 bits (77), Expect = 0.18 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 355 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 + Q++V+G + K++ +N V G LG E KNL L GV Sbjct: 448 YDAQVSVFGSKLQKKMEEANTFVVGSGALGCEFLKNLALMGV 489
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 2/58 (3%) Frame = +1 Query: 319 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G+E IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIAKN++L GVK+ Sbjct: 41 MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKA 98
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 2/58 (3%) Frame = +1 Query: 319 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G+E IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIAKN++L GVK+ Sbjct: 41 MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKA 98
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 68.6 bits (166), Expect = 9e-12 Identities = 37/58 (63%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = +1 Query: 319 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G+E IDE L+SRQL V G E MK L S+VLVSGL+GLG EIAKN++L GVK+ Sbjct: 41 MAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKA 98
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 67.0 bits (162), Expect = 3e-11 Identities = 34/50 (68%), Positives = 41/50 (82%) Frame = +1 Query: 337 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 EIDE L+SRQL V G+E M ++ SNVL+ GL+GLG EIAKN+VLAGVKS Sbjct: 13 EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKS 62
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 65.5 bits (158), Expect = 7e-11 Identities = 33/49 (67%), Positives = 40/49 (81%) Frame = +1 Query: 340 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 +DE+L+SRQL V G M+R+ G+ VLVSGLQGLGAE+AKNLVL GV S Sbjct: 10 LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVLMGVGS 58
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/51 (64%), Positives = 39/51 (76%) Frame = +1 Query: 334 NEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 N IDE L+SRQL V G E MK++ SNVL+ G +GLG EIAKN+ LAGVKS Sbjct: 13 NTIDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKS 63
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 55.5 bits (132), Expect = 8e-08 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +1 Query: 355 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 483 + RQ+ ++G E KRL S VL+ G++GLGAEIAKNL+LAGVK Sbjct: 23 YDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVK 65
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 55.5 bits (132), Expect = 8e-08 Identities = 27/43 (62%), Positives = 34/43 (79%) Frame = +1 Query: 355 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 483 + RQ+ ++G E KRL S VL+ GL+GLGAEIAKNL+LAGVK Sbjct: 19 YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVK 61
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 38.1 bits (87), Expect = 0.013 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +1 Query: 319 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA++G + E + RQL ++G + L ++V + G EI KNLVL G+ S Sbjct: 1 MAQQGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGS 56
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 37.0 bits (84), Expect = 0.028 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +1 Query: 319 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G + E + RQL ++G + L ++V + G EI KNLVL G+ S Sbjct: 1 MAQPGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGS 56
>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Protooncogene protein 1) (HPP1) Length = 534 Score = 37.0 bits (84), Expect = 0.028 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +1 Query: 319 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G + E + RQL ++G + L ++V + G EI KNLVL G+ S Sbjct: 1 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGS 56
>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 510 Score = 37.0 bits (84), Expect = 0.028 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +1 Query: 319 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G + E + RQL ++G + L ++V + G EI KNLVL G+ S Sbjct: 1 MAQPGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGS 56
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 36.2 bits (82), Expect = 0.048 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +1 Query: 385 ETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 483 ET+K F S +L+ G GLG EI K+L L+G + Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALSGFR 69
>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 535 Score = 34.7 bits (78), Expect = 0.14 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 319 MARRGN-EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 MA+ G + E + RQL ++G + L ++V V G EI KNLVL G+ S Sbjct: 1 MAQPGRASLKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGS 57
>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit| (Ubiquitin-like activation protein 1) Length = 541 Score = 34.3 bits (77), Expect = 0.18 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = +1 Query: 355 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 + RQ+ ++G E + ++ V G L EI K+LVLAGV+S Sbjct: 10 YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQS 53
>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)| Length = 347 Score = 34.3 bits (77), Expect = 0.18 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Frame = +1 Query: 319 MARRGNEIDED---LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 M + ++ ED L+ RQ+ ++G + + VL+ L +G+EI K++VL+G+ Sbjct: 1 MDMKVEKLSEDEIALYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLSGI 57
>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31| Length = 307 Score = 33.9 bits (76), Expect = 0.24 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +1 Query: 352 LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 L+ RQ+ ++G + L S VL+ L EIAKNLVL+G+ Sbjct: 13 LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGI 55
>HESA1_ANAVT (P46049) Protein hesA, heterocyst| Length = 267 Score = 33.9 bits (76), Expect = 0.24 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +1 Query: 355 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 +SRQ+ + +G KRL + VLV+G+ GLG A L +AGV Sbjct: 12 YSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 55
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 33.5 bits (75), Expect = 0.31 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 382 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 477 RE + + G VLV G G+G E+ KNLVL G Sbjct: 9 RELAEAVAGGRVLVVGAGGIGCELLKNLVLTG 40
>HESA2_ANAVT (P46048) Protein hesA, vegetative| Length = 265 Score = 33.5 bits (75), Expect = 0.31 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 376 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 +G+E +RL + VLV+G+ GLG A L +AGV Sbjct: 21 FGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGV 55
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 33.5 bits (75), Expect = 0.31 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 382 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 477 RE + + G VLV G G+G E+ KNLVL G Sbjct: 9 RELAEAVSGGRVLVVGAGGIGCELLKNLVLTG 40
>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3 homolog) (Ectopic membrane ruffles in embryo protein 1) Length = 430 Score = 33.1 bits (74), Expect = 0.40 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 373 VYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 V G E + L + +LV G GLG E+ KNL L+G ++ Sbjct: 31 VPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFRT 68
>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 32.7 bits (73), Expect = 0.53 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 340 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 I E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 7 IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 53
>HESA_ANASP (P18500) Protein hesA| Length = 252 Score = 32.0 bits (71), Expect = 0.90 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +1 Query: 376 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 +G KRL + VLV+G+ GLG A L +AGV Sbjct: 6 FGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 40
>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +1 Query: 346 EDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 9 EQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGI 53
>CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6) (P450-DB1)| (Debrisoquine 4-hydroxylase) Length = 497 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/49 (44%), Positives = 26/49 (53%) Frame = -1 Query: 402 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 EAL LA I +A +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)| (Cardiolipin synthase) (CL synthase) Length = 413 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +3 Query: 351 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 452 P QSPARR W R H+A P Q +W RD Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206
>YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)| (Cardiolipin synthase) (CL synthase) Length = 413 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +3 Query: 351 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 452 P QSPARR W R H+A P Q +W RD Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206
>RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 325 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV++ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVET 883
>RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 325 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV++ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVET 883
>RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 325 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV++ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVET 883
>RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 325 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV++ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVET 883
>RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 325 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 486 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV++ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVET 883
>CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26) (P450-DB2)| (P450-CMF2) (Debrisoquine 4-hydroxylase) Length = 500 Score = 29.3 bits (64), Expect = 5.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 Query: 351 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 +LVDLV + PG +PLPG G LLQV Sbjct: 21 LLVDLVHRHKFWTAHYPPGPVPLPGLGNLLQV 52
>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)| Length = 497 Score = 29.3 bits (64), Expect = 5.8 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 396 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 L L + +A +LVDL+ + PG LPLPG G LL V Sbjct: 3 LDALVPLAVTVAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_PANTR (Q2XNC8) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)| Length = 497 Score = 29.3 bits (64), Expect = 5.8 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -1 Query: 402 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 EAL LA I + +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_PANPA (Q2XNC9) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)| Length = 497 Score = 29.3 bits (64), Expect = 5.8 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -1 Query: 402 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 EAL LA I + +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin| D(3) 25-hydroxylase) Length = 499 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -1 Query: 351 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 +LVDL+ + PG +PLPG G LLQV Sbjct: 20 LLVDLMHRRSRWAPRYPPGPMPLPGLGNLLQV 51
>KLF9_HUMAN (Q13886) Krueppel-like factor 9 (Transcription factor BTEB1) (Basic| transcription element-binding protein 1) (BTE-binding protein 1) (GC box-binding protein 1) Length = 244 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = +3 Query: 351 PAQSPARRLWPRDHEAPLRLQRPRLWTSGSRCRDRKEPCP-RGC 479 P+ SP R P +PL L P + G +++ CP GC Sbjct: 107 PSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPYSGC 150
>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 415 VLVSGLQGLGAEIAKNLVLAGVK 483 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 415 VLVSGLQGLGAEIAKNLVLAGVK 483 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1046 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = +1 Query: 331 GNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 480 GNE+ E L+ R L Y ++++ + LV + + +IAK ++ AGV Sbjct: 766 GNEVIESLYERILGRYAQKSVFEPQTGDKLVGHNEMITEDIAKRIIEAGV 815
>CP2DJ_CALJA (O18992) Cytochrome P450 2D19 (EC 1.14.14.1) (CYPIID19) (P450| CM2D-1) Length = 497 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -1 Query: 396 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 256 L L + +A +LVDL+ + PG +PLPG G LL V Sbjct: 3 LDALVPLAVTVAIFVLLVDLMHRRQRWAARYPPGPMPLPGLGNLLHV 49
>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 415 VLVSGLQGLGAEIAKNLVLAGVK 483 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 415 VLVSGLQGLGAEIAKNLVLAGVK 483 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>LEU1_STRCO (O31046) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 573 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +2 Query: 5 CNPVLQSHPRNPRRTVPRLLPSPTRQANPRFRGGRTRWI*RGSSRR 142 C V+ ++ P R + LP+ ++ P R W+ R SRR Sbjct: 200 CEAVMDTYQPGPGREIILNLPATVERSTPSTHADRFEWMGRNLSRR 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,244,900 Number of Sequences: 219361 Number of extensions: 997964 Number of successful extensions: 4012 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4009 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
