Clone Name | bastl14b05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence Length = 196738 Score = 38.2 bits (19), Expect = 1.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 aacccaaccctcccccaag 43 ||||||||||||||||||| Sbjct: 4665 aacccaaccctcccccaag 4683
>gb|AC146115.2| Pan troglodytes BAC clone RP43-38M17 from 7, complete sequence Length = 204127 Score = 38.2 bits (19), Expect = 1.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccaaccctcccccaagag 45 ||||||||||||||||||| Sbjct: 142349 cccaaccctcccccaagag 142331
>gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete sequence Length = 234834 Score = 38.2 bits (19), Expect = 1.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 aaccctcccccaagagaag 48 ||||||||||||||||||| Sbjct: 71536 aaccctcccccaagagaag 71554
>gb|AC122158.17| Mus musculus strain 129/Sv clone ct7-433o3 map 15, complete sequence Length = 135612 Score = 38.2 bits (19), Expect = 1.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 aacccaaccctcccccaag 43 ||||||||||||||||||| Sbjct: 73612 aacccaaccctcccccaag 73630
>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence Length = 203403 Score = 38.2 bits (19), Expect = 1.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccaaccctcccccaagag 45 ||||||||||||||||||| Sbjct: 61178 cccaaccctcccccaagag 61196
>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence Length = 205302 Score = 38.2 bits (19), Expect = 1.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 aacccaaccctcccccaag 43 ||||||||||||||||||| Sbjct: 8822 aacccaaccctcccccaag 8804
>gb|AC183611.2| Pan troglodytes BAC clone CH251-193J21 from chromosome 4, complete sequence Length = 166748 Score = 36.2 bits (18), Expect = 7.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 29 caaccctcccccaagagaagaa 50 ||||||| |||||||||||||| Sbjct: 47142 caacccttccccaagagaagaa 47121
>gb|AC101652.8| Mus musculus chromosome 1, clone RP23-58D20, complete sequence Length = 168183 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 34 ctcccccaagagaagaag 51 |||||||||||||||||| Sbjct: 148549 ctcccccaagagaagaag 148532
>gb|AC144705.2| Danio rerio clone CH211-160P5, complete sequence Length = 163897 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 aacccaaccctcccccaa 42 |||||||||||||||||| Sbjct: 12121 aacccaaccctcccccaa 12104
>emb|AL590966.10| Human DNA sequence from clone RP11-191N8 on chromosome 1 Contains the DUSP10 gene for dual specificity phosphatase 10 (DUSP10), a novel gene and a CpG island, complete sequence Length = 165588 Score = 36.2 bits (18), Expect = 7.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 29 caaccctcccccaagagaagaa 50 ||||||| |||||||||||||| Sbjct: 32164 caacccttccccaagagaagaa 32143
>emb|BX957248.11| Zebrafish DNA sequence from clone DKEY-195J22 in linkage group 13, complete sequence Length = 77299 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 25 aacccaaccctcccccaa 42 |||||||||||||||||| Sbjct: 20688 aacccaaccctcccccaa 20705
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 cccaaccctcccccaaga 44 |||||||||||||||||| Sbjct: 47184 cccaaccctcccccaaga 47201
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 cccaaccctcccccaaga 44 |||||||||||||||||| Sbjct: 96136 cccaaccctcccccaaga 96153
>emb|AL808104.14| Mouse DNA sequence from clone RP23-30M20 on chromosome 2, complete sequence Length = 199494 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 35 tcccccaagagaagaagg 52 |||||||||||||||||| Sbjct: 5230 tcccccaagagaagaagg 5213
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 cccaaccctcccccaaga 44 |||||||||||||||||| Sbjct: 80765 cccaaccctcccccaaga 80782
>gb|AC101764.11| Mus musculus chromosome 3, clone RP24-471B15, complete sequence Length = 151388 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 32 ccctcccccaagagaaga 49 |||||||||||||||||| Sbjct: 33689 ccctcccccaagagaaga 33706
>gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, complete sequence Length = 165033 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 34 ctcccccaagagaagaag 51 |||||||||||||||||| Sbjct: 38491 ctcccccaagagaagaag 38508
>emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chromosome 12, complete sequence Length = 203805 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 aacccaaccctcccccaa 42 |||||||||||||||||| Sbjct: 72722 aacccaaccctcccccaa 72705
>emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on chromosome 2, complete sequence Length = 191052 Score = 36.2 bits (18), Expect = 7.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 32 ccctcccccaagagaaga 49 |||||||||||||||||| Sbjct: 110777 ccctcccccaagagaaga 110794 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 401,919 Number of Sequences: 3902068 Number of extensions: 401919 Number of successful extensions: 97866 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97824 Number of HSP's gapped (non-prelim): 42 length of query: 52 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 32 effective length of database: 17,155,003,908 effective search space: 548960125056 effective search space used: 548960125056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)