>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
Length = 866
Score = 34.3 bits (77), Expect = 0.15
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 217 AASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTST--- 387
AA+ A T T +A T T A T+ ATT S +T+ +STST
Sbjct: 290 AATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGASTSTPSA 349
Query: 388 TTIRGATWRSSAMVTLKSTSTP 453
+T AT S++ +TSTP
Sbjct: 350 STATSATPTSTSTSAAATTSTP 371
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +1
Query: 217 AASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTI 396
AAS A T + T T+ ATT +P A T TA ++ +TT
Sbjct: 139 AASTSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAA 198
Query: 397 RGATWRSSAMVTLKSTST 450
++A T +T+T
Sbjct: 199 TTTAATTTAATTTAATTT 216
Score = 30.4 bits (67), Expect = 2.2
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATT--IIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAM 426
T +A TP T A T+ ATT + A + +T +ST TTT +T ++A
Sbjct: 112 TPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTAT 171
Query: 427 VTLKSTST 450
T+ +T++
Sbjct: 172 TTVPTTAS 179
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
Length = 725
Score = 33.1 bits (74), Expect = 0.33
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVT 432
T ++ + T ++ TSP++T + S++T+ +SSTST++ +T SS +
Sbjct: 210 TSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTS 269
Query: 433 LKSTST 450
STST
Sbjct: 270 SSSTST 275
Score = 32.3 bits (72), Expect = 0.57
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVT 432
T ++L+ T + TSP++T + + S++T+ SSTST+ +T S +
Sbjct: 182 TTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTS 241
Query: 433 LKSTST 450
STST
Sbjct: 242 SSSTST 247
Score = 32.0 bits (71), Expect = 0.74
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 220 ASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIR 399
+S P T T ++ + T + TS ++T + + S++T+ SSTST++
Sbjct: 178 SSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSL 237
Query: 400 GATWRSSAMVTLKSTST 450
+T SS + STST
Sbjct: 238 TSTSSSSTSTSQSSTST 254
Score = 30.0 bits (66), Expect = 2.8
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +1
Query: 205 SGCRAASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTS 384
S +S T T ++ + T ++ TS ++T + S++T+ SSTS
Sbjct: 208 SSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTS 267
Query: 385 TTTIRGATWRSSAMVTLKSTST 450
T++ +T SS + STST
Sbjct: 268 TSSSSTSTSPSSKSTSASSTST 289
Score = 28.9 bits (63), Expect = 6.3
Identities = 23/103 (22%), Positives = 38/103 (36%)
Frame = +1
Query: 142 LSPEHXXXXXXXXXXXXXXXXSGCRAASRPAGTWRCRTRSALARTPPATCRALTSPATTI 321
+SP S + T T ++ + T ++ TS ++T
Sbjct: 166 ISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTS 225
Query: 322 IPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVTLKSTST 450
+ S+ T+ SSTST+ +T SS + STST
Sbjct: 226 TSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTST 268
>VGLX_EHV1B (P28968) Glycoprotein X precursor|
Length = 797
Score = 31.2 bits (69), Expect = 1.3
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +1
Query: 217 AASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTI 396
AA+ A T T +A T T A T+ ATT A +TA ++T+ T
Sbjct: 187 AATTTAATTTAATTTAATTTAATTTAATTTAATT--TAATTSSATTAATTTAATTTAATT 244
Query: 397 RGATWRSSAMVTLKSTSTP 453
AT ++ +T +P
Sbjct: 245 TAATTTAATTTAATTTGSP 263
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +1
Query: 217 AASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTI 396
AAS A T + T T+ ATT +P A T TA ++ +TT
Sbjct: 139 AASTSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAA 198
Query: 397 RGATWRSSAMVTLKSTST 450
++A T +T+T
Sbjct: 199 TTTAATTTAATTTAATTT 216
Score = 30.4 bits (67), Expect = 2.2
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATT--IIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAM 426
T +A TP T A T+ ATT + A + +T +ST TTT +T ++A
Sbjct: 112 TPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTAT 171
Query: 427 VTLKSTST 450
T+ +T++
Sbjct: 172 TTVPTTAS 179
Score = 29.6 bits (65), Expect = 3.7
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTST---TTIRGATWRSSA 423
T +A T T A T+ ATT S +T+ +STST +T AT S++
Sbjct: 233 TTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTS 292
Query: 424 MVTLKSTSTP 453
+TSTP
Sbjct: 293 TSAAATTSTP 302
Score = 29.3 bits (64), Expect = 4.8
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +1
Query: 220 ASRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIR 399
AS T T +A T T A T+ ATT + AT ++ +TTT
Sbjct: 178 ASTTTDTTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAA 237
Query: 400 GATWRSSAMVTLKSTST 450
T ++ T + +T
Sbjct: 238 TTTAATTTAATTTAATT 254
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
Length = 1161
Score = 30.4 bits (67), Expect = 2.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 274 TPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVTLKSTST 450
T P T T+P T+ P + ++ T+ KS+T TT+ T +S T +TST
Sbjct: 214 TTPTTSTTSTTPTTSTTPTTSTTSTTSQTST-KSTTPTTSSTSTTPTTSTTPTTSTTST 271
Score = 29.3 bits (64), Expect = 4.8
Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 271 RTPPATCRALTSPAT-TIIPAQAHGCCSTATALFKSSTS---TTTIRGATWRSSAMVTLK 438
R PA AL+ T IP ST+T KSSTS TTTI T +S T
Sbjct: 103 RLKPAISSALSKDGIYTAIPT------STSTTTTKSSTSTTPTTTITSTTSTTSTTPTTS 156
Query: 439 STST 450
+TST
Sbjct: 157 TTST 160
Score = 28.9 bits (63), Expect = 6.3
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVT 432
++++ T P T T+P T+ P + + T+ ++++T+TI A S+ T
Sbjct: 240 SQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSST 299
Query: 433 LKSTS 447
++S
Sbjct: 300 FSTSS 304
Score = 28.5 bits (62), Expect = 8.2
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Frame = +1
Query: 229 PAGTWRCRTRSALARTPPATCRALTSP----------ATTIIPAQAHGCCSTATALFKSS 378
P T T+S+ + TP T + TS +TT + +T+T +
Sbjct: 122 PTSTSTTTTKSSTSTTPTTTITSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPT 181
Query: 379 TSTTTIRGATWRSSAMVTLKSTST 450
TSTT+ T +S T +TST
Sbjct: 182 TSTTSTTPTTSTTSTTPTTSTTST 205
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
Length = 3178
Score = 29.6 bits (65), Expect = 3.7
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 229 PAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGAT 408
P T T + + + P+T + S +TT + ST+T SST T++ T
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTT 356
Query: 409 WRSSAMVTLKSTSTP 453
+S + +T+TP
Sbjct: 357 LSTS----IPTTTTP 367
Score = 29.3 bits (64), Expect = 4.8
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 259 SALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVTLK 438
S TP +T TSP++T+ + ST SST ++T + S+A T
Sbjct: 469 STTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSV-SSTASSTQS 527
Query: 439 STST 450
STST
Sbjct: 528 STST 531
Score = 28.5 bits (62), Expect = 8.2
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +1
Query: 223 SRPAGTWRCRTRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRG 402
+ P T T S + T P+T TSP+T+ + + S++T + +++ +T
Sbjct: 426 TEPTTTLTTSTAST-STTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTS 484
Query: 403 ATWRSSAMVTLKSTST 450
+ + T STST
Sbjct: 485 PSSTVTTSTTAPSTST 500
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
(High molecular weight salivary mucin MG1) (Sublingual
gland mucin)
Length = 5703
Score = 29.3 bits (64), Expect = 4.8
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Frame = +1
Query: 220 ASRPAGTWRCRTRSALART----PPATCRALTSPATTI-------------IPAQAHGCC 348
A+ PA T T S+ RT P T A S AT+ +PAQ
Sbjct: 4654 ATTPAATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLWTTWTVPAQTTTPM 4713
Query: 349 STATALFKSSTSTTTIRGATWRSSAMVT--LKSTSTP 453
ST + + SST TT ++A +T ST+TP
Sbjct: 4714 STMSTIHTSSTPETTHTSTVLTTTATMTRATNSTATP 4750
Score = 28.5 bits (62), Expect = 8.2
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 268 ARTPPATCRALTSPAT---TIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVT 432
ARTPP T+P T T+ P+ G T T L ++ T AT SS +
Sbjct: 3826 ARTPPVWISTTTTPTTSGSTVTPSSIPGTTHTPTVLTTTTQPVATGSMATPSSSTQTS 3883
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)|
Length = 860
Score = 28.5 bits (62), Expect = 8.2
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +1
Query: 253 TRSALARTPPATCRALTSPATTIIPAQAHGCCSTATALFKSSTSTTTIRGATWRSSAMVT 432
TRSA T P T R+ P+TTI A T T + STT +TW +S +
Sbjct: 418 TRSA--STEPVTTRSQEPPSTTISTRSA--STETVTTRSQEPPSTTI---STWSASTETS 470
Query: 433 LKSTSTP 453
S +P
Sbjct: 471 TSSQDSP 477
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,987,291
Number of Sequences: 219361
Number of extensions: 1017699
Number of successful extensions: 3308
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3257
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)