>VCAP_SHV21 (Q00999) Major capsid protein (MCP)|
          Length = 1371

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 3   HPTQPVFSSVHEAAARMSEWRSNHRHK**NIPPPNSQRPSQE 128
           HP   V++  H+ AA   ++R+ HR+   N+PPP +    QE
Sbjct: 533 HPFFDVYAERHQGAA--VQYRATHRNLSGNLPPPLAPYSFQE 572

>VGLC_HHV2G (P03173) Glycoprotein C precursor (Glycoprotein F)|
          Length = 479

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 390 QPRR*APSSRGASPNAPKPIKRRPRRESLLHIHCPRQAPLCGSGTRPEL 244
           QPR+   S    +  AP P K  P + S   + C R  PL   G+R ++
Sbjct: 63  QPRKATKSKASTAKPAPPP-KTGPPKTSSEPVRCNRHDPLARYGSRVQI 110

>NPFF1_HUMAN (Q9GZQ6) Neuropeptide FF receptor 1 (G-protein coupled receptor|
           147) (RFamide-related peptide receptor OT7T022)
          Length = 430

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 372 PSSRGASPNAPKPIKRRPRRESLLHIHCPRQAPLC 268
           PS  G S  AP+P +   R   + H   PR+ P C
Sbjct: 384 PSESGPSSGAPRPGRLPLRNGRVAHHGLPREGPGC 418

>VGLC_HHV2H (Q89730) Glycoprotein C precursor|
          Length = 480

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 390 QPRR*APSSRGASPNAPKPIKRRPRRESLLHIHCPRQAPLCGSGTRPEL 244
           QPR+   S    +  AP P K  P + S   + C R  PL   G+R ++
Sbjct: 64  QPRKATKSKASTAKPAPPP-KTGPPKTSSEPVRCNRHDPLARYGSRVQI 111

>VGLC_HHV23 (P06475) Glycoprotein C precursor|
          Length = 480

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 390 QPRR*APSSRGASPNAPKPIKRRPRRESLLHIHCPRQAPLCGSGTRPEL 244
           QPR+   S    +  AP P K  P + S   + C R  PL   G+R ++
Sbjct: 64  QPRKATKSKASTAKPAPPP-KTGPPKTSSEPVRCNRHDPLARYGSRVQI 111

>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -1

Query: 393 RQPRR*APSSRGASPNAPKPIKRR------PRRESLLHIHCPRQAPLCGSGTRP 250
           R+P   +  +RG S  A  P++R       P+R      H P QAP  G+  RP
Sbjct: 376 RRPDGTSVGTRGGSEGATPPVERTATAPTAPKRPG----HRPAQAPAAGAPRRP 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,438,598
Number of Sequences: 219361
Number of extensions: 816810
Number of successful extensions: 2475
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2473
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)