>CHEB1_DESDG (Q311M8) Chemotaxis response regulator protein-glutamate|
           methylesterase 1 (EC 3.1.1.61)
          Length = 369

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 9   LPASFFAPRPSTAPHQPAPLALRLVRRP--APTSARTSTGDQQ 131
           +P   F P P+  P   AP ALR   RP  AP+SA +STG  Q
Sbjct: 133 VPGRSFRPAPAVRP--AAPAALRATPRPSAAPSSAASSTGTLQ 173

>SYV_NATPD (Q3IUE5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 872

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
 Frame = +2

Query: 254 WRTQLVDNRSKNQSFPPPPAGSDPAVAGGQVAQ------RGWASRQGRAI 385
           W     D    N ++P PPAG + A   G++        RGW S +G+ +
Sbjct: 693 WSHLPADGSVHNAAWPDPPAGDEAAEERGELIAEVAATIRGWKSDEGKPL 742

>PHHC_PSEAE (P43336) Aromatic-amino-acid aminotransferase (EC 2.6.1.57)|
          Length = 399

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/57 (36%), Positives = 25/57 (43%)
 Frame = -2

Query: 474 RLIPQSSHRITAGGEGLAESRARRRFRCLMIARPCLLAQPRCATWPPATAGSLPAGG 304
           RL+ Q + +   GG G A   AR     L  A P LL Q   AT  P   G+L   G
Sbjct: 57  RLVEQETTKSYVGGHGDALFAARLAELALGAASPLLLEQRADATQTPGGTGALRLAG 113

>K1543_HUMAN (Q9P1Y5) Protein KIAA1543|
          Length = 1249

 Score = 25.4 bits (54), Expect(2) = 4.1
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 92  SSNQRSNLDRRPAELRAAPLGR 157
           S + RS    RPAELR APL R
Sbjct: 775 SQSPRSPKHTRPAELRLAPLTR 796



 Score = 22.7 bits (47), Expect(2) = 4.1
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
 Frame = +3

Query: 12  PASFFAPRPSTAPHQPAPLALRLV----RRPAP 98
           PA++  P P+T P   +P   R V    R P P
Sbjct: 740 PAAWVIPGPTTGPKAASPSPARRVPATRRSPGP 772

>ABP1_SACEX (P38479) Actin-binding protein|
          Length = 617

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 230 TSSHPPCRWRTQLVDNRSKNQSFPPPPAGSDPA 328
           T   PP +W T  +    K Q+F  P A S PA
Sbjct: 379 TEPEPPVQWETDSIPTVVKPQTFGQPAANSKPA 411

>KAZD1_HUMAN (Q96I82) Kazal-type serine protease inhibitor domain-containing|
           protein 1 precursor
          Length = 304

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 30  PRPSTAPHQPAPLALRLVRRPAPTSARTSTG 122
           PRP+ A   P  L L +V  P PT AR S G
Sbjct: 5   PRPAAALALPVLLLLLVVLTPPPTGARPSPG 35

>PKNK_MYCTU (P95078) Probable serine/threonine-protein kinase pknK (EC|
           2.7.11.1)
          Length = 1110

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = -1

Query: 406 PPLPVLDDRPSLPTSPAPLRHLATGHGWVAAGWRRRKGLIFAP 278
           PP P    RPS+PT     R   T    + AG RRR  LI AP
Sbjct: 329 PPTPATKYRPSVPTGSLVTRSRLT--DILRAGGRRRLILIHAP 369

>PKNK_MYCBO (Q7TXA9) Probable serine/threonine-protein kinase pknK (EC|
           2.7.11.1)
          Length = 1110

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = -1

Query: 406 PPLPVLDDRPSLPTSPAPLRHLATGHGWVAAGWRRRKGLIFAP 278
           PP P    RPS+PT     R   T    + AG RRR  LI AP
Sbjct: 329 PPTPATKYRPSVPTGSLVTRSRLT--DILRAGGRRRLILIHAP 369

>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)|
          Length = 2567

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 248  CRWRTQLVDNRSKNQSFPPPPAGSDPAVAGGQVA 349
            C     +V++RS  +S PPP  G D   AGG +A
Sbjct: 1201 CLVPNPVVESRSGQESPPPPQPGRDKPGAGGPLA 1234

>PMP2_CHLPN (Q9Z3A1) Probable outer membrane protein pmp2 precursor|
           (Polymorphic membrane protein 2) (Outer membrane protein
           7)
          Length = 841

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
 Frame = +2

Query: 245 PCRWRTQL----VDNRSKNQSFPPPP--AGSDPAVAGGQVAQRGWASRQGRAI 385
           PC +  QL     D+R K +S PPPP    +D    GG V    WA   G  +
Sbjct: 647 PCSFYGQLSYGHTDHRMKTESLPPPPPTLSTDHTSWGGYV----WAGELGTRV 695

>ENV_RSFFV (P03389) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E]
          Length = 408

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 12  PASFFAPRPSTAPHQPAPLALRLVRRPAPTSARTSTGDQ 128
           P     PRP   P  P P A  +V   AP S +  TGD+
Sbjct: 249 PVQIMLPRP---PQPPPPGAASIVPETAPPSQQPGTGDR 284

>ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Coat protein p12E; Spike protein
           p15E]
          Length = 640

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 12  PASFFAPRPSTAPHQPAPLALRLVRRPAPTSARTSTGDQ 128
           P     PRP   P  P P A  +V   AP S +  TGD+
Sbjct: 252 PVQIMLPRP---PQPPPPGAASIVPETAPPSQQPGTGDR 287

>ENV_MCFF3 (P03388) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E; R protein]
          Length = 640

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 12  PASFFAPRPSTAPHQPAPLALRLVRRPAPTSARTSTGDQ 128
           P     PRP   P  P P A  +V   AP S +  TGD+
Sbjct: 249 PVQIMLPRP---PQPPPPGAASIVPETAPPSQQLGTGDR 284

>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein|
            kinase with no lysine 2) (Protein kinase,
            lysine-deficient 2)
          Length = 2297

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 406  PPLPVLDDRPSLPTSPAPLR 347
            PP PVL  +P+LP  P PL+
Sbjct: 987  PPQPVLPPQPALPVRPEPLQ 1006


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,240,183
Number of Sequences: 219361
Number of extensions: 867514
Number of successful extensions: 4165
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4156
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)