ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483215.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
3dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
4dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
5dbj|AK103001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
6ref|NM_058562.1| Caenorhabditis elegans Y39G10AR.15 (Y39G10AR.15... 44 0.42
7gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete ... 44 0.42
8gb|AC152065.4| Mus musculus BAC clone RP23-16D9 from chromosome ... 42 1.7
9gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.7
10ref|XM_807545.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.7
11ref|XM_778030.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.7
12emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
13gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.7
14dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.7
15gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.7
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
17dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
18dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
19dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
20emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.7
21dbj|AK065764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
22gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.7
23gb|DQ147239.1| Zea mays subsp. parviglumis isolate p9 cysteine p... 42 1.7
24gb|DQ147237.1| Zea mays subsp. parviglumis isolate p6 cysteine p... 42 1.7
25gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, com... 40 6.5
26gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
27ref|XM_475262.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
28ref|XM_470230.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
29gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete s... 40 6.5
30gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
31ref|XM_592353.2| PREDICTED: Bos taurus similar to tripartite mot... 40 6.5
32ref|XM_423814.1| PREDICTED: Gallus gallus similar to serine palm... 40 6.5
33ref|XM_425060.1| PREDICTED: Gallus gallus similar to sequence en... 40 6.5
34gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
35gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, com... 40 6.5
36gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.5
37ref|XM_752277.1| Ustilago maydis 521 hypothetical protein (UM012... 40 6.5
38ref|XM_755767.1| Ustilago maydis 521 hypothetical protein (UM047... 40 6.5
39ref|XM_818274.1| Trypanosoma brucei TREU927 hypothetical protein... 40 6.5
40ref|XM_801845.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.5
41ref|XM_806649.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 6.5
42gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome... 40 6.5
43gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.5
44emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chr... 40 6.5
45emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chr... 40 6.5
46emb|AL133375.25| Human DNA sequence from clone RP3-330M21 on chr... 40 6.5
47emb|AL121748.7|HSA342D11 Human DNA sequence from clone RP11-342D... 40 6.5
48emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 ... 40 6.5
49gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
50ref|XM_795100.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 6.5
51emb|AJ605114.1| Chlamydomonas reinhardtii mRNA for putative grou... 40 6.5
52gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome... 40 6.5
53emb|AJ536667.1|HVU536667 Hordeum vulgare mRNA for putative WRKY1... 40 6.5
54gb|BC108121.1| Bos taurus cDNA clone IMAGE:7989828, partial cds 40 6.5
55gb|AC091868.3| Homo sapiens chromosome 5 clone CTD-2372A4, compl... 40 6.5
56gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, compl... 40 6.5
57gb|AF027201.1|BTROSGC2 Bos taurus rod outer segment guanylate cy... 40 6.5
58gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.5
59gb|AC009488.5| Homo sapiens BAC clone RP11-336D7 from 7, complet... 40 6.5
60emb|CR387246.1| Gallus gallus finished cDNA, clone ChEST136o22 40 6.5
61ref|NM_032538.1| Homo sapiens tau tubulin kinase 1 (TTBK1), mRNA 40 6.5
62dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
63dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
64dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
65gb|AY206771.1| Chlamydomonas reinhardtii flagella membrane glyco... 40 6.5
66ref|XM_244043.3| PREDICTED: Rattus norvegicus similar to RP3-330... 40 6.5
67gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
68gb|DQ163913.1| Bacteriophage PA73, complete genome 40 6.5
69dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
70dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
71dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
72emb|Z31561.1|RCSCR1R R.communis (Carmencita) Scr1 mRNA for sucro... 40 6.5
73emb|AJ224961.1|RCA224961 Ricinus communis sucrose carrier 40 6.5
74emb|AJ310643.1|RCO310643 Ricinus communis partial scr1 gene for ... 40 6.5
75dbj|AK110392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
76ref|XM_307954.2| Anopheles gambiae str. PEST ENSANGP00000006268 ... 40 6.5
77dbj|AK099948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
78dbj|AK072852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
79emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chro... 40 6.5
80gb|AY541586.1| Hordeum vulgare WRKY transcription factor (wrky38... 40 6.5
81gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.5
82gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5 
>ref|XM_483215.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 832

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 203 cgccgctgcggctgcggctgcgc 225
           |||||||||||||||||||||||
Sbjct: 232 cgccgctgcggctgcggctgcgc 254
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 203      cgccgctgcggctgcggctgcgc 225
                |||||||||||||||||||||||
Sbjct: 24847817 cgccgctgcggctgcggctgcgc 24847839



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 204      gccgctgcggctgcggctgc 223
                ||||||||||||||||||||
Sbjct: 22100196 gccgctgcggctgcggctgc 22100177



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      gagccctcgccgccaccgcc 191
                ||||||||||||||||||||
Sbjct: 13960349 gagccctcgccgccaccgcc 13960368
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1345_D02
          Length = 159613

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 203    cgccgctgcggctgcggctgcgc 225
              |||||||||||||||||||||||
Sbjct: 148618 cgccgctgcggctgcggctgcgc 148640
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>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1506_F01
          Length = 121202

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 203   cgccgctgcggctgcggctgcgc 225
             |||||||||||||||||||||||
Sbjct: 52263 cgccgctgcggctgcggctgcgc 52285
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>dbj|AK103001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G04, full
           insert sequence
          Length = 831

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 203 cgccgctgcggctgcggctgcgc 225
           |||||||||||||||||||||||
Sbjct: 231 cgccgctgcggctgcggctgcgc 253
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>ref|NM_058562.1| Caenorhabditis elegans Y39G10AR.15 (Y39G10AR.15) mRNA, complete cds
          Length = 2115

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 288 atcaatcctttcctcctcctcc 309
           ||||||||||||||||||||||
Sbjct: 267 atcaatcctttcctcctcctcc 246
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>gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete sequence
          Length = 132558

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 288   atcaatcctttcctcctcctcc 309
             ||||||||||||||||||||||
Sbjct: 45207 atcaatcctttcctcctcctcc 45228
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>gb|AC152065.4| Mus musculus BAC clone RP23-16D9 from chromosome 12, complete sequence
          Length = 226392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    gctgcggctgcggctgcgctg 227
              |||||||||||||||||||||
Sbjct: 174691 gctgcggctgcggctgcgctg 174671
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 200     gggcgccgctgcggctgcggctgcg 224
               |||||| ||||||||||||||||||
Sbjct: 2240398 gggcgcggctgcggctgcggctgcg 2240374
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>ref|XM_807545.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506649.90) partial mRNA
          Length = 7023

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  gccgctgcggctgcggctgcg 224
            |||||||||||||||||||||
Sbjct: 3902 gccgctgcggctgcggctgcg 3882
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>ref|XM_778030.1| PREDICTED: Strongylocentrotus purpuratus similar to Homeobox
           protein Nkx-2.5 (Homeobox protein NK-2 homolog E)
           (Cardiac-specific homeobox) (Homeobox protein CSX)
           (LOC577823), mRNA
          Length = 1035

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 204 gccgctgcggctgcggctgcg 224
           |||||||||||||||||||||
Sbjct: 785 gccgctgcggctgcggctgcg 765
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 200    gggcgccgctgcggctgcggctgcg 224
              |||||| ||||||||||||||||||
Sbjct: 401740 gggcgcggctgcggctgcggctgcg 401716
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 208     ctgcggctgcggctgcgctgg 228
               |||||||||||||||||||||
Sbjct: 2955737 ctgcggctgcggctgcgctgg 2955757



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gcccgcgccgctggcactcc 75
              ||||||||||||||||||||
Sbjct: 599440 gcccgcgccgctggcactcc 599421
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 204     gccgctgcggctgcggctgcg 224
               |||||||||||||||||||||
Sbjct: 2143372 gccgctgcggctgcggctgcg 2143392
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 200     gggcgccgctgcggctgcggctgcg 224
               |||||| ||||||||||||||||||
Sbjct: 1586352 gggcgcggctgcggctgcggctgcg 1586376
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 200      gggcgccgctgcggctgcggc 220
                |||||||||||||||||||||
Sbjct: 28297740 gggcgccgctgcggctgcggc 28297760



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 41      cacggcgccgcaccagcccgc 61
               |||||||||||||||||||||
Sbjct: 9146598 cacggcgccgcaccagcccgc 9146578
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   gggcgccgctgcggctgcggc 220
             |||||||||||||||||||||
Sbjct: 10318 gggcgccgctgcggctgcggc 10338
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>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0662B01
          Length = 155913

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    cacggcgccgcaccagcccgc 61
             |||||||||||||||||||||
Sbjct: 40620 cacggcgccgcaccagcccgc 40600
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0623A10
          Length = 156517

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   gggcgccgctgcggctgcggc 220
             |||||||||||||||||||||
Sbjct: 95769 gggcgccgctgcggctgcggc 95789
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 119     cggcgaccagcagagcttcgc 139
               |||||||||||||||||||||
Sbjct: 2963571 cggcgaccagcagagcttcgc 2963591
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>dbj|AK065764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042D24, full
           insert sequence
          Length = 1823

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  cacggcgccgcaccagcccgc 61
           |||||||||||||||||||||
Sbjct: 105 cacggcgccgcaccagcccgc 125
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 204     gccgctgcggctgcggctgcg 224
               |||||||||||||||||||||
Sbjct: 2163275 gccgctgcggctgcggctgcg 2163295
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>gb|DQ147239.1| Zea mays subsp. parviglumis isolate p9 cysteine protease Mir1
           (mir1) gene, partial cds
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 200 gggcgccgctgcggctgcggc 220
           |||||||||||||||||||||
Sbjct: 271 gggcgccgctgcggctgcggc 251
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>gb|DQ147237.1| Zea mays subsp. parviglumis isolate p6 cysteine protease Mir1
           (mir1) gene, partial cds
          Length = 1045

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 200 gggcgccgctgcggctgcggc 220
           |||||||||||||||||||||
Sbjct: 274 gggcgccgctgcggctgcggc 254
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>gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, complete sequence
          Length = 193859

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   caatcctttcctcctcctcc 309
             ||||||||||||||||||||
Sbjct: 86257 caatcctttcctcctcctcc 86276
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>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048I21, complete sequence
          Length = 137650

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gagccctcgccgccaccgcc 191
             ||||||||||||||||||||
Sbjct: 27313 gagccctcgccgccaccgcc 27332
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>ref|XM_475262.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2568

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 gagccctcgccgccaccgcc 191
           ||||||||||||||||||||
Sbjct: 80  gagccctcgccgccaccgcc 61
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>ref|XM_470230.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 ccgctgcggctgcggctgcg 224
           ||||||||||||||||||||
Sbjct: 42  ccgctgcggctgcggctgcg 23
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>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     gcgccgcaccagcccgcgcc 64
              ||||||||||||||||||||
Sbjct: 101096 gcgccgcaccagcccgcgcc 101077
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>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map
              near E1419S, complete sequence
          Length = 133421

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    ggcgccgctgcggctgcggctgcg 224
              |||||||| |||||||||||||||
Sbjct: 106804 ggcgccgcggcggctgcggctgcg 106827
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>ref|XM_592353.2| PREDICTED: Bos taurus similar to tripartite motif-containing 6
            isoform 1 (LOC514492), mRNA
          Length = 2128

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tcctttcctcctcctccagc 312
            ||||||||||||||||||||
Sbjct: 1009 tcctttcctcctcctccagc 990
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>ref|XM_423814.1| PREDICTED: Gallus gallus similar to serine palmitoyltransferase
           subunit 1 isoform a; serine C-palmitoyltransferase; long
           chain base biosynthesis protein 1; serine-palmitoyl-CoA
           transferase 1; hereditary sensory neuropathy, type 1
           (LOC426144), mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 tcctcctcctccagccggca 317
           ||||||||||||||||||||
Sbjct: 91  tcctcctcctccagccggca 110
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>ref|XM_425060.1| PREDICTED: Gallus gallus similar to sequence encoding 37 predicted
           5 amino acids has not been determined (LOC427489), mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 gctgcggctgcggctgcgct 226
           ||||||||||||||||||||
Sbjct: 752 gctgcggctgcggctgcgct 733
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>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
              complete sequence
          Length = 177374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gagccctcgccgccaccgcc 191
              ||||||||||||||||||||
Sbjct: 156336 gagccctcgccgccaccgcc 156355
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>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence
          Length = 232699

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   caatcctttcctcctcctcc 309
             ||||||||||||||||||||
Sbjct: 13232 caatcctttcctcctcctcc 13213
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 201      ggcgccgctgcggctgcggctgcg 224
                |||||||| |||||||||||||||
Sbjct: 23797146 ggcgccgcggcggctgcggctgcg 23797123



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     ccgctgcggctgcggctgcg 224
               ||||||||||||||||||||
Sbjct: 2682046 ccgctgcggctgcggctgcg 2682065
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>ref|XM_752277.1| Ustilago maydis 521 hypothetical protein (UM01223.1) partial mRNA
          Length = 3513

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgctgcggctgcggctgc 223
            ||||||||||||||||||||
Sbjct: 1573 gccgctgcggctgcggctgc 1592
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>ref|XM_755767.1| Ustilago maydis 521 hypothetical protein (UM04713.1) partial mRNA
          Length = 2283

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 gctgcggctgcggctgcgct 226
           ||||||||||||||||||||
Sbjct: 682 gctgcggctgcggctgcgct 663
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>ref|XM_818274.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.26.0310)
            partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  ccgctgcggctgcggctgcg 224
            ||||||||||||||||||||
Sbjct: 1520 ccgctgcggctgcggctgcg 1501
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>ref|XM_801845.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508349.30) partial mRNA
          Length = 7023

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  gccgctgcggctgcggctgc 223
            ||||||||||||||||||||
Sbjct: 3902 gccgctgcggctgcggctgc 3883
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>ref|XM_806649.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510373.119) partial mRNA
          Length = 679

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 tgcggctgcggctgcgctgg 228
           ||||||||||||||||||||
Sbjct: 649 tgcggctgcggctgcgctgg 668
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>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence
          Length = 190772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ccgctgcggctgcggctgcg 224
             ||||||||||||||||||||
Sbjct: 23469 ccgctgcggctgcggctgcg 23450
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     ccgctgcggctgcggctgcg 224
               ||||||||||||||||||||
Sbjct: 1543380 ccgctgcggctgcggctgcg 1543361
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>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the
             5' end of the gene for regulator of differentiation 1
             (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a
             CpG island.n, complete sequence
          Length = 64850

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 264   aacttgttgataaccggagcaaaa 287
             |||||||||||||| |||||||||
Sbjct: 52053 aacttgttgataactggagcaaaa 52076
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>emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chromosome 10 Contains
            the 5' end of the NRP1 gene for neuropilin 1, a novel
            gene and a CpG island, complete sequence
          Length = 124540

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  aaatcaatcctttcctcctc 305
            ||||||||||||||||||||
Sbjct: 1928 aaatcaatcctttcctcctc 1947
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>emb|AL133375.25| Human DNA sequence from clone RP3-330M21 on chromosome 6 Contains the
             3' end of the SRF gene for serum response factor (c-fos
             serum response element-binding transcription factor), a
             gene for a novel protein (KIAA0076 KIAA0708), the gene for
             a putative c-Myc-responsive protein (RCL), the gene for
             KIAA1855 protein and CpG islands, complete sequence
          Length = 117071

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ccgctgcggctgcggctgcg 224
             ||||||||||||||||||||
Sbjct: 65984 ccgctgcggctgcggctgcg 65965
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>emb|AL121748.7|HSA342D11 Human DNA sequence from clone RP11-342D11 on chromosome 10 Contains the
              3' end of the NRP1 gene for neuropilin 1 and two novel
              genes, complete sequence
          Length = 178183

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    aaatcaatcctttcctcctc 305
              ||||||||||||||||||||
Sbjct: 178111 aaatcaatcctttcctcctc 178130
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>emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 on chromosome 6q26-27 Contains
             a novel gene, the MAS1 oncogene, the 5' end of the IGF2R
             gene for insulin-like growth factor 2 receptor
             (cation-independent mannose-6 phosphate receptor,
             Insulin-like growth factor-2 receptor (mannose-6-phosphate
             receptor, cation-independent)) (MPRI, CD222, CIMPR, M6P-R)
             and two CpG islands, complete sequence
          Length = 129968

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   cctttcctcctcctccagcc 313
             ||||||||||||||||||||
Sbjct: 81054 cctttcctcctcctccagcc 81073
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>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ccgctgcggctgcggctgcg 224
             ||||||||||||||||||||
Sbjct: 55977 ccgctgcggctgcggctgcg 55958
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>ref|XM_795100.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC582749 (LOC582749), partial mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gccgctgcggctgcggctgc 223
           ||||||||||||||||||||
Sbjct: 152 gccgctgcggctgcggctgc 133
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>emb|AJ605114.1| Chlamydomonas reinhardtii mRNA for putative group II intron
            trans-splicing factor Raa1 precursor (raa1 gene)
          Length = 6827

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 201  ggcgccgctgcggctgcggctgcg 224
            ||||| ||||||||||||||||||
Sbjct: 5397 ggcgcggctgcggctgcggctgcg 5420
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>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence
          Length = 209118

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    ccgctgcggctgcggctgcg 224
              ||||||||||||||||||||
Sbjct: 159699 ccgctgcggctgcggctgcg 159680
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>emb|AJ536667.1|HVU536667 Hordeum vulgare mRNA for putative WRKY1 protein
          Length = 1454

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  gcactccgcctggtccggcg 88
           ||||||||||||||||||||
Sbjct: 499 gcactccgcctggtccggcg 480
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>gb|BC108121.1| Bos taurus cDNA clone IMAGE:7989828, partial cds
          Length = 2463

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcctttcctcctcctccagc 312
           ||||||||||||||||||||
Sbjct: 767 tcctttcctcctcctccagc 748
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>gb|AC091868.3| Homo sapiens chromosome 5 clone CTD-2372A4, complete sequence
          Length = 45976

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    ctccctgcttctttctttgc 28
            ||||||||||||||||||||
Sbjct: 9607 ctccctgcttctttctttgc 9588
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>gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, complete sequence
          Length = 206254

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ctccctgcttctttctttgc 28
             ||||||||||||||||||||
Sbjct: 11200 ctccctgcttctttctttgc 11219
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>gb|AF027201.1|BTROSGC2 Bos taurus rod outer segment guanylate cyclase precursor (ROS-GC1)
            gene, exons 4 through 8
          Length = 5626

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  cctttcctcctcctccagcc 313
            ||||||||||||||||||||
Sbjct: 1767 cctttcctcctcctccagcc 1786
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     gctgcggctgcgctggaacc 232
               ||||||||||||||||||||
Sbjct: 3168585 gctgcggctgcgctggaacc 3168566
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>gb|AC009488.5| Homo sapiens BAC clone RP11-336D7 from 7, complete sequence
          Length = 98876

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    gcgccgcaccagcccgcgcc 64
             ||||||||||||||||||||
Sbjct: 15394 gcgccgcaccagcccgcgcc 15413
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>emb|CR387246.1| Gallus gallus finished cDNA, clone ChEST136o22
          Length = 804

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 gctgcggctgcggctgcgct 226
           ||||||||||||||||||||
Sbjct: 518 gctgcggctgcggctgcgct 499
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>ref|NM_032538.1| Homo sapiens tau tubulin kinase 1 (TTBK1), mRNA
          Length = 7128

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 ccgctgcggctgcggctgcg 224
           ||||||||||||||||||||
Sbjct: 214 ccgctgcggctgcggctgcg 195
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     ccgctgcggctgcggctgcg 224
               ||||||||||||||||||||
Sbjct: 1437182 ccgctgcggctgcggctgcg 1437163
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      gagccctcgccgccaccgcc 191
                ||||||||||||||||||||
Sbjct: 20900535 gagccctcgccgccaccgcc 20900554
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 201      ggcgccgctgcggctgcggctgcg 224
                |||||||| |||||||||||||||
Sbjct: 23790234 ggcgccgcggcggctgcggctgcg 23790211



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     ccgctgcggctgcggctgcg 224
               ||||||||||||||||||||
Sbjct: 2682156 ccgctgcggctgcggctgcg 2682175
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>gb|AY206771.1| Chlamydomonas reinhardtii flagella membrane glycoprotein 1A gene,
            complete cds
          Length = 24232

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgctgcggctgcggctgc 223
            ||||||||||||||||||||
Sbjct: 1358 gccgctgcggctgcggctgc 1377
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>ref|XM_244043.3| PREDICTED: Rattus norvegicus similar to RP3-330M21.4 (LOC316229),
           mRNA
          Length = 4848

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 ccgctgcggctgcggctgcg 224
           ||||||||||||||||||||
Sbjct: 139 ccgctgcggctgcggctgcg 120
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>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050N02, complete sequence
          Length = 133373

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   ccgctgcggctgcggctgcg 224
             ||||||||||||||||||||
Sbjct: 26965 ccgctgcggctgcggctgcg 26984
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>gb|DQ163913.1| Bacteriophage PA73, complete genome
          Length = 42999

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 200   gggcgccgctgcggctgcggctgc 223
             |||||| |||||||||||||||||
Sbjct: 16330 gggcgcggctgcggctgcggctgc 16353
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>dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0005C02
          Length = 62423

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gagccctcgccgccaccgcc 191
             ||||||||||||||||||||
Sbjct: 14672 gagccctcgccgccaccgcc 14691
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>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1136_D12
          Length = 105521

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gagccctcgccgccaccgcc 191
              ||||||||||||||||||||
Sbjct: 104744 gagccctcgccgccaccgcc 104763
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>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1117_F10
          Length = 169948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gccgctgcggctgcggctgc 223
             ||||||||||||||||||||
Sbjct: 63159 gccgctgcggctgcggctgc 63140
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>emb|Z31561.1|RCSCR1R R.communis (Carmencita) Scr1 mRNA for sucrose carrier
          Length = 1956

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ccgcctggtccggcgaccag 93
           ||||||||||||||||||||
Sbjct: 855 ccgcctggtccggcgaccag 836
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>emb|AJ224961.1|RCA224961 Ricinus communis sucrose carrier
          Length = 1002

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ccgcctggtccggcgaccag 93
           ||||||||||||||||||||
Sbjct: 646 ccgcctggtccggcgaccag 627
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>emb|AJ310643.1|RCO310643 Ricinus communis partial scr1 gene for sucrose carrier
          Length = 919

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ccgcctggtccggcgaccag 93
           ||||||||||||||||||||
Sbjct: 665 ccgcctggtccggcgaccag 646
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>dbj|AK110392.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-E07, full
           insert sequence
          Length = 3132

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 ccgctgcggctgcggctgcg 224
           ||||||||||||||||||||
Sbjct: 443 ccgctgcggctgcggctgcg 424
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>ref|XM_307954.2| Anopheles gambiae str. PEST ENSANGP00000006268
           (ENSANGG00000004771), partial mRNA
          Length = 2682

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 tcctcctccagccggcagcg 320
           ||||||||||||||||||||
Sbjct: 875 tcctcctccagccggcagcg 856
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>dbj|AK099948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D13, full
           insert sequence
          Length = 1956

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 201 ggcgccgctgcggctgcggctgcg 224
           |||||||| |||||||||||||||
Sbjct: 298 ggcgccgcggcggctgcggctgcg 275
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>dbj|AK072852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138H13, full
           insert sequence
          Length = 1630

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 ccgctgcggctgcggctgcg 224
           ||||||||||||||||||||
Sbjct: 35  ccgctgcggctgcggctgcg 16
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>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete
             sequence
          Length = 152730

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ccgctgcggctgcggctgcg 224
             ||||||||||||||||||||
Sbjct: 87358 ccgctgcggctgcggctgcg 87339
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>gb|AY541586.1| Hordeum vulgare WRKY transcription factor (wrky38) gene, complete
           cds
          Length = 1667

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  gcactccgcctggtccggcg 88
           ||||||||||||||||||||
Sbjct: 734 gcactccgcctggtccggcg 715
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    gctgcggctgcggctgcgct 226
              ||||||||||||||||||||
Sbjct: 314518 gctgcggctgcggctgcgct 314499
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     ccgctgcggctgcggctgcg 224
               ||||||||||||||||||||
Sbjct: 1434903 ccgctgcggctgcggctgcg 1434884


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,150,486
Number of Sequences: 3902068
Number of extensions: 4150486
Number of successful extensions: 103530
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101223
Number of HSP's gapped (non-prelim): 2302
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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