Clone Name | bastl14a07 |
---|---|
Clone Library Name | barley_pub |
>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence Length = 177843 Score = 46.1 bits (23), Expect = 0.022 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 ||||||||||||||||||||||| Sbjct: 80423 cttccttccttcctccaccccct 80445
>gb|AC091538.3| Sus scrofa clone RP44-26G1, complete sequence Length = 40014 Score = 42.1 bits (21), Expect = 0.34 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacccc 35 ||||||||||||||||||||| Sbjct: 9968 cttccttccttcctccacccc 9948
>gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, complete sequence Length = 213989 Score = 42.1 bits (21), Expect = 0.34 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tcgcgcttccttccttcctcc 30 ||||||||||||||||||||| Sbjct: 211272 tcgcgcttccttccttcctcc 211252
>gb|AC073550.14| Homo sapiens BAC clone RP11-457C23 from 7, complete sequence Length = 47362 Score = 42.1 bits (21), Expect = 0.34 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacccc 35 ||||||||||||||||||||| Sbjct: 8696 cttccttccttcctccacccc 8716
>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the 5' end of a novel gene, a ribosomal protein L7A (Rpl7a) pseudogene and a CpG island, complete sequence Length = 127405 Score = 42.1 bits (21), Expect = 0.34 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacccc 35 ||||||||||||||||||||| Sbjct: 92744 cttccttccttcctccacccc 92724
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 0.34 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 ccacatggactccgcctccgcctcc 115 |||| |||||||||||||||||||| Sbjct: 2681310 ccacctggactccgcctccgcctcc 2681286
>gb|AY860818.1| Chlamydomonas reinhardtii putative chloroplast lycopene beta cyclase precursor (LCYB) mRNA, complete cds; nuclear gene for chloroplast product Length = 3272 Score = 42.1 bits (21), Expect = 0.34 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 catggactccgcctccgcctc 114 ||||||||||||||||||||| Sbjct: 1397 catggactccgcctccgcctc 1377
>emb|AL806530.6| Mouse DNA sequence from clone RP23-152B24 on chromosome 4, complete sequence Length = 85718 Score = 42.1 bits (21), Expect = 0.34 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacccc 35 ||||||||||||||||||||| Sbjct: 67385 cttccttccttcctccacccc 67405
>gb|AC150512.3| Bos taurus BAC CH240-319N17 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167026 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccc 34 |||||||||||||||||||| Sbjct: 162 cttccttccttcctccaccc 143
>gb|AC124160.3| Lemur catta clone LB2-260A3, complete sequence Length = 160625 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccc 34 |||||||||||||||||||| Sbjct: 78173 cttccttccttcctccaccc 78154
>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence Length = 199240 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccctg 38 |||||||||||||||| ||||||| Sbjct: 101969 cttccttccttcctcccccccctg 101992
>gb|BC100381.1| Mus musculus cDNA clone IMAGE:30475313 Length = 2038 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gcttccttccttcctccacc 33 |||||||||||||||||||| Sbjct: 1518 gcttccttccttcctccacc 1537
>emb|AL627443.6| Human DNA sequence from clone RP11-459F1 on chromosome 6 Contains a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel gene, the T gene for T, brachyury homolog (mouse) and a CpG island, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccc 34 |||||||||||||||||||| Sbjct: 144250 cttccttccttcctccaccc 144231
>gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 map 13, complete sequence Length = 232472 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccctg 38 |||||||||||||||| ||||||| Sbjct: 24228 cttccttccttcctcccccccctg 24251
>dbj|AK143138.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130114E04 product:unclassifiable, full insert sequence Length = 3701 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gcttccttccttcctccacc 33 |||||||||||||||||||| Sbjct: 193 gcttccttccttcctccacc 174
>gb|AC020610.6| Homo sapiens 12q BAC RP11-548L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92893 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cttccttcctccaccccctg 38 |||||||||||||||||||| Sbjct: 44687 cttccttcctccaccccctg 44706
>emb|BX000454.33| Mouse DNA sequence from clone RP24-276N4 on chromosome 4, complete sequence Length = 59316 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gcttccttccttcctccacc 33 |||||||||||||||||||| Sbjct: 57170 gcttccttccttcctccacc 57189
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccc 34 |||||||||||||||||||| Sbjct: 163396 cttccttccttcctccaccc 163377
>gb|BC027170.1| Mus musculus expressed sequence C79267, mRNA (cDNA clone MGC:36549 IMAGE:4952810), complete cds Length = 1600 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gcttccttccttcctccacc 33 |||||||||||||||||||| Sbjct: 1044 gcttccttccttcctccacc 1063
>ref|NM_183148.1| Mus musculus expressed sequence C79267 (C79267), mRNA Length = 1600 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gcttccttccttcctccacc 33 |||||||||||||||||||| Sbjct: 1044 gcttccttccttcctccacc 1063
>gb|AC102735.9| Mus musculus chromosome 5, clone RP24-237I4, complete sequence Length = 167871 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 ||||||||||||| ||||||||| Sbjct: 146874 cttccttccttcccccaccccct 146852
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 1614535 ttccttcctccaccccctg 1614553
>gb|AC102014.6| Mus musculus chromosome 1, clone RP24-553D14, complete sequence Length = 142451 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 67639 cttccttccttcctccacc 67621
>gb|AC164607.4| Mus musculus chromosome 5, clone RP23-455A10, complete sequence Length = 183927 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 164122 cttccttccttcctccacc 164104 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 138527 cttccttccttcctccacc 138509
>gb|AC087835.2| Pan troglodytes clone RP43-93P21, complete sequence Length = 162681 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 153732 ttccttcctccaccccctg 153750
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 catggactccgcctccgcc 112 ||||||||||||||||||| Sbjct: 13898741 catggactccgcctccgcc 13898759
>gb|AC004240.1| Homo sapiens BAC clone CTA-363I12 from 7, complete sequence Length = 85946 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 64904 ttccttcctccaccccctg 64922
>gb|AC004540.1| Homo sapiens PAC clone RP5-1066K24 from 7, complete sequence Length = 131757 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 ccttccttcctccaccccc 36 ||||||||||||||||||| Sbjct: 16729 ccttccttcctccaccccc 16747
>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence Length = 212472 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 125513 cttccttccttcctcccccccct 125491
>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence Length = 253343 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 213111 cttccttccttcctcccccccct 213133
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 catggactccgcctccgcc 112 ||||||||||||||||||| Sbjct: 112741 catggactccgcctccgcc 112723
>gb|AC125459.4| Mus musculus BAC clone RP24-418N13 from chromosome 8, complete sequence Length = 194237 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 118785 cttccttccttcctcccccccct 118763
>gb|AC121954.2| Mus musculus BAC clone RP24-218I17 from 6, complete sequence Length = 182855 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 ttccttccttcctccaccc 34 ||||||||||||||||||| Sbjct: 121326 ttccttccttcctccaccc 121344
>gb|AC098731.3| Mus musculus BAC clone RP23-3L10 from 9, complete sequence Length = 220184 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 ||||||||||||||||| ||||| Sbjct: 148488 cttccttccttcctccatcccct 148510
>ref|XM_541487.2| PREDICTED: Canis familiaris similar to TBC1 domain family, member 17 (LOC484372), mRNA Length = 2470 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 ccttcctccaccccctgat 40 ||||||||||||||||||| Sbjct: 747 ccttcctccaccccctgat 765
>gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, complete sequence Length = 261979 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 gcttccttccttcctccac 32 ||||||||||||||||||| Sbjct: 77953 gcttccttccttcctccac 77935
>gb|AC161232.7| Mus musculus chromosome 3, clone RP24-369J22, complete sequence Length = 203311 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 114837 cttccttccttcctccacc 114819
>emb|AL138756.23| Human DNA sequence from clone RP11-4O1 on chromosome 9q31.3-33.1 Contains the 3' end of gene DKFZP761E1824, complete sequence Length = 189156 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 tccttccttcctccacccc 35 ||||||||||||||||||| Sbjct: 7549 tccttccttcctccacccc 7531
>emb|AL135779.10| Human DNA sequence from clone RP1-125N20 on chromosome 6, complete sequence Length = 74180 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 57121 cttccttccttcctccacc 57103
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ggactccgcctccgcctcc 115 ||||||||||||||||||| Sbjct: 68124 ggactccgcctccgcctcc 68106
>emb|AL929414.5| Mouse DNA sequence from clone RP23-222A19 on chromosome 11, complete sequence Length = 153928 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 19253 cttccttccttcctcccccccct 19231
>gb|DQ388145.1| Homo sapiens isolate cftr13838_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, complete cds; and CTTNBP2 (CTTNBP2) gene, partial cds Length = 422127 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 283043 ttccttcctccaccccctg 283061
>gb|DQ388144.1| Homo sapiens isolate cftr13838_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 423518 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 284424 ttccttcctccaccccctg 284442
>gb|DQ388143.1| Homo sapiens isolate cftr11589_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 460130 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 284889 ttccttcctccaccccctg 284907
>gb|DQ388142.1| Homo sapiens isolate cftr11589_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 461372 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 285552 ttccttcctccaccccctg 285570
>gb|DQ388141.1| Homo sapiens isolate cftr11521_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 459743 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 287405 ttccttcctccaccccctg 287423
>gb|DQ388140.1| Homo sapiens isolate cftr11521_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 468331 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 293267 ttccttcctccaccccctg 293285
>gb|DQ388139.1| Homo sapiens isolate cftr11376_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 480116 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 299261 ttccttcctccaccccctg 299279
>gb|DQ388138.1| Homo sapiens isolate cftr11376_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 450881 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 289846 ttccttcctccaccccctg 289864
>gb|DQ388135.1| Homo sapiens isolate cftr11321_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 429415 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 283663 ttccttcctccaccccctg 283681
>gb|DQ388134.1| Homo sapiens isolate cftr11321_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 434687 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 288906 ttccttcctccaccccctg 288924
>gb|DQ388137.1| Homo sapiens isolate cftr11373_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 411333 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 282590 ttccttcctccaccccctg 282608
>gb|DQ388136.1| Homo sapiens isolate cftr11373_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 446786 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 282604 ttccttcctccaccccctg 282622
>gb|DQ388133.1| Homo sapiens isolate cftr10976_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 462987 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 286533 ttccttcctccaccccctg 286551
>gb|DQ388132.1| Homo sapiens isolate cftr10976_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 456610 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 285710 ttccttcctccaccccctg 285728
>gb|DQ388131.1| Homo sapiens isolate cftr10543_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 443905 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 282897 ttccttcctccaccccctg 282915
>gb|DQ388130.1| Homo sapiens isolate cftr10543_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 459213 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 282916 ttccttcctccaccccctg 282934
>gb|DQ388129.1| Homo sapiens isolate cftr10540_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 458144 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 282609 ttccttcctccaccccctg 282627
>gb|DQ388128.1| Homo sapiens isolate cftr10540_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 451649 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 282623 ttccttcctccaccccctg 282641
>gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, complete sequence Length = 113330 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 ||||||||||||||||| ||||| Sbjct: 93522 cttccttccttcctccatcccct 93500
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 71525 cttccttccttcctccacc 71543
>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence Length = 213367 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 130810 cttccttccttcctcctccccct 130788
>gb|AC160053.2| Mus musculus BAC clone RP23-339M18 from chromosome 9, complete sequence Length = 188000 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 82289 cttccttccttcctcccccccct 82311
>gb|DQ356264.1| Homo sapiens isolate cftr14672_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 425451 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 286455 ttccttcctccaccccctg 286473
>gb|DQ356263.1| Homo sapiens isolate cftr14672_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 458173 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 291877 ttccttcctccaccccctg 291895
>gb|DQ356262.1| Homo sapiens isolate cftr14663_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 451123 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 284926 ttccttcctccaccccctg 284944
>gb|DQ356261.1| Homo sapiens isolate cftr14663_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 449665 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 287153 ttccttcctccaccccctg 287171
>gb|DQ356260.1| Homo sapiens isolate cftr10975_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 447228 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 286546 ttccttcctccaccccctg 286564
>gb|DQ356259.1| Homo sapiens isolate cftr10975_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 450685 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 285683 ttccttcctccaccccctg 285701
>gb|DQ356258.1| Homo sapiens isolate cftr10471_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 461061 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 270908 ttccttcctccaccccctg 270926
>gb|DQ356257.1| Homo sapiens isolate cftr10471_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 495329 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 295231 ttccttcctccaccccctg 295249
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 acatggactccgcctccgcctcc 115 |||||||||||||| |||||||| Sbjct: 7918674 acatggactccgccgccgcctcc 7918652
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 19443659 cttccttccttcctccacc 19443677
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 catggactccgcctccgcc 112 ||||||||||||||||||| Sbjct: 13893716 catggactccgcctccgcc 13893734
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 33091309 cttccttccttcctccacc 33091327
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 1519783 ttccttcctccaccccctg 1519801
>gb|AC110620.3| Homo sapiens BAC clone RP11-683I7 from 2, complete sequence Length = 142234 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 61934 cttccttccttcctcctccccct 61912
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 28219 cttccttccttcctccacc 28237
>gb|DQ354391.1| Homo sapiens isolate cftr01814_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 439798 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 297944 ttccttcctccaccccctg 297962
>gb|DQ354390.1| Homo sapiens isolate cftr01814_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 437219 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 289188 ttccttcctccaccccctg 289206
>gb|DQ354389.1| Homo sapiens isolate cftr14683_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 430078 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 284291 ttccttcctccaccccctg 284309
>gb|DQ354388.1| Homo sapiens isolate cftr14683_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 461441 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 284409 ttccttcctccaccccctg 284427
>gb|AC138779.2| Homo sapiens BAC clone RP11-601I15 from 4, complete sequence Length = 132003 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 26030 cttccttccttcctcccccccct 26008
>gb|AC027663.14|AC027663 Homo sapiens chromosome 1 clone RP11-285I23, complete sequence Length = 170969 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 ||||||||||||||||| ||||| Sbjct: 89670 cttccttccttcctccatcccct 89648
>gb|AC009890.12|AC009890 Genomic Sequence For Homo sapiens Clone H_NH0262L04 From Chromosome 18, complete sequence Length = 177223 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 14936 cttccttccttcctcccccccct 14914
>gb|AC102106.14| Mus musculus chromosome 18, clone RP23-92B24, complete sequence Length = 230823 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 92707 cttccttccttcctcctccccct 92685
>gb|AC152943.1| Mus musculus 10 BAC RP23-225G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198492 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tccttcctccaccccctga 39 ||||||||||||||||||| Sbjct: 126957 tccttcctccaccccctga 126939
>dbj|AK107948.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-B08, full insert sequence Length = 967 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 acatggactccgcctccgcctcc 115 |||||||||||||| |||||||| Sbjct: 82 acatggactccgccgccgcctcc 60
>dbj|AK070811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O10, full insert sequence Length = 3437 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 41 cttccttccttcctccacc 59
>dbj|AP003043.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-617B3, complete sequence Length = 180648 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ttccttcctccaccccctg 38 ||||||||||||||||||| Sbjct: 48823 ttccttcctccaccccctg 48805
>dbj|AP006219.1| Homo sapiens genomic DNA, chromosome 18, clone:RP11-243E13, complete sequence Length = 104000 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 93840 cttccttccttcctcccccccct 93862
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 19454935 cttccttccttcctccacc 19454953
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 acatggactccgcctccgcctcc 115 |||||||||||||| |||||||| Sbjct: 7918555 acatggactccgccgccgcctcc 7918533
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 93 acatggactccgcctccgcctcc 115 |||||||||||||| |||||||| Sbjct: 81496 acatggactccgccgccgcctcc 81518
>gb|AC134893.4| Mus musculus BAC clone RP24-251N8 from 9, complete sequence Length = 166674 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 cttccttccttcctccaccccct 37 ||||||||||||||||| ||||| Sbjct: 147235 cttccttccttcctccatcccct 147213
>gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, complete sequence Length = 185830 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 63803 cttccttccttcctcccccccct 63825
>gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, complete sequence Length = 165291 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 160060 cttccttccttcctccacc 160078 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 cttccttccttcctccacc 33 ||||||||||||||||||| Sbjct: 134465 cttccttccttcctccacc 134483
>gb|AC127270.4| Mus musculus BAC clone RP23-453E16 from 12, complete sequence Length = 181004 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 gcttccttccttcctccaccccc 36 ||||||||||||||||| ||||| Sbjct: 147485 gcttccttccttcctcccccccc 147463
>emb|CT025664.5| Mouse DNA sequence from clone RP24-174I18 on chromosome 9, complete sequence Length = 163813 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 109095 cttccttccttcctcccccccct 109117
>dbj|AP007292.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D08, TM0313, complete sequence Length = 98441 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 tccgactctgttaaaccca 64 ||||||||||||||||||| Sbjct: 39454 tccgactctgttaaaccca 39472
>dbj|AP006120.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39P22, TM0204, complete sequence Length = 98532 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 tccgactctgttaaaccca 64 ||||||||||||||||||| Sbjct: 54849 tccgactctgttaaaccca 54867
>emb|AL845316.3| Mouse DNA sequence from clone RP23-348I7 on chromosome X, complete sequence Length = 197688 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 cttccttccttcctccaccccct 37 |||||||||||||||| |||||| Sbjct: 167761 cttccttccttcctcctccccct 167783
>emb|AL671993.7| Mouse DNA sequence from clone RP23-428E5 on chromosome X, complete sequence Length = 194106 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 ttccttccttcctccaccc 34 ||||||||||||||||||| Sbjct: 30544 ttccttccttcctccaccc 30526 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,900,758 Number of Sequences: 3902068 Number of extensions: 1900758 Number of successful extensions: 670567 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 668517 Number of HSP's gapped (non-prelim): 2050 length of query: 115 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 94 effective length of database: 17,151,101,840 effective search space: 1612203572960 effective search space used: 1612203572960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)