ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds 571 e-160
2gb|AF542966.1| Triticum aestivum lon protease-like mRNA, partial... 567 e-158
3gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA... 293 3e-76
4gb|DQ002905.1| Oryza sativa (indica cultivar-group) lon protease... 242 8e-61
5gb|AY129070.1| Oryza sativa (indica cultivar-group) Lon protease... 242 8e-61
6gb|AY109454.1| Zea mays CL1713_1 mRNA sequence 202 7e-49
7gb|U85494.1|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complet... 202 7e-49
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
10dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
11gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 50 0.006
12dbj|D85610.1| Spinacia oleracea mRNA for ATP-dependent protease ... 48 0.025
13gb|AC139621.4| Artibeus jamaicensis clone 47H5, complete sequence 44 0.39
14gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold 44 0.39
15dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
16dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.6
17gb|AY676875.1| Pseudomonas putida strain 3SK lipolytic autotrans... 40 6.1
18ref|XM_479695.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
19gb|AY430948.1| Uncultured prokaryote clone 828-2 AclB (aclB) gen... 40 6.1
20gb|AC123531.4| Mus musculus BAC clone RP24-289C11 from chromosom... 40 6.1
21gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, comp... 40 6.1
22gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 6.1
23gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.1
24gb|AY321492.1| Pseudomonas putida copABCD operon, complete sequence 40 6.1
25emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chr... 40 6.1
26gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.1
27dbj|AK123713.1| Homo sapiens cDNA FLJ41719 fis, clone HLUNG20132... 40 6.1
28dbj|AP005226.1| Corynebacterium efficiens plasmid pCE3 DNA, comp... 40 6.1
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30gb|AC013471.7| Homo sapiens BAC clone RP11-489A14 from 2, comple... 40 6.1
31gb|AE004924.1| Pseudomonas aeruginosa PAO1, section 485 of 529 o... 40 6.1
32dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
33dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34emb|AJ277638.1|PAE277638 Pseudomonas aeruginosa papA gene 40 6.1
35gb|AF005091.1|AF005091 Pseudomonas aeruginosa lipase/esterase (e... 40 6.1
36gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, com... 40 6.1
37emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chro... 40 6.1 
>gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds
          Length = 3143

 Score =  571 bits (288), Expect = e-160
 Identities = 354/376 (94%)
 Strand = Plus / Plus

                                                                       
Query: 81  cggcggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttcc 140
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 48  cggcggccatggcggacgcgccggtggagctgccgggccggctcgccatactgccgttcc 107

                                                                       
Query: 141 gcaacaaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcg 200
           |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |
Sbjct: 108 gcaacaaggtgctcctcccgggcgccatcgtgcggatccgatgcacctaccccagcagtg 167

                                                                       
Query: 201 tcaagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttc 260
           | ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 168 taaagctggtggagcaggagctctggcagagggaggacaggggtctgatcggagtgcttc 227

                                                                       
Query: 261 ccgtgcgggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtg 320
           | ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||
Sbjct: 228 cggtgcgggactccgaggctgcggctgttggttccatcctgtcgcctggcgtgggcagtg 287

                                                                       
Query: 321 attcaggggaaggaggccgccggtcgcctggtgcttctgggagggagtcgagcaaacagg 380
           ||||||| || ||||||||| |||||||||||| ||||||| | ||||||| ||||||||
Sbjct: 288 attcaggtgacggaggccgcaggtcgcctggtggttctgggggagagtcgaccaaacagg 347

                                                                       
Query: 381 atgcaaagagcgggaaggagcccattcactggcacagccggggagttgctgctagagctc 440
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 atgcaaagagtgggaaggagcccattcactggcacagccggggagttgctgctagagctc 407

                           
Query: 441 tacacctttcaagagg 456
           | ||||||||||||||
Sbjct: 408 tgcacctttcaagagg 423
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>gb|AF542966.1| Triticum aestivum lon protease-like mRNA, partial sequence
          Length = 742

 Score =  567 bits (286), Expect = e-158
 Identities = 352/374 (94%)
 Strand = Plus / Plus

                                                                       
Query: 83  gcggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgc 142
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 58  gcggccatggcggacgcgccggtggagctgccgggccggctcgccatactgccgttccgc 117

                                                                       
Query: 143 aacaaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcgtc 202
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 118 aacaaggtgctcctcccgggcgccatcgtgcggatccgatgcaccaaccccagcagtgtc 177

                                                                       
Query: 203 aagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttccc 262
           |||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| 
Sbjct: 178 aagctggtggagcaggagctctggcaaagggaggacaagggtctgatcggagttcttcct 237

                                                                       
Query: 263 gtgcgggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgat 322
           ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct: 238 gtgcgggactcggaggctgcagctgttggttcgatcctgtcgcctggcgtgggcagtgat 297

                                                                       
Query: 323 tcaggggaaggaggccgccggtcgcctggtgcttctgggagggagtcgagcaaacaggat 382
           ||||| |||||||||||| |||||||||||| ||||||| | ||||| | ||||||||||
Sbjct: 298 tcaggtgaaggaggccgcaggtcgcctggtggttctgggggagagtcaaccaaacaggat 357

                                                                       
Query: 383 gcaaagagcgggaaggagcccattcactggcacagccggggagttgctgctagagctcta 442
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 358 gcaaagagttggaaggagcccattcactggcacagccggggagttgctgctagagctctg 417

                         
Query: 443 cacctttcaagagg 456
           ||||||||||||||
Sbjct: 418 cacctttcaagagg 431
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>gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA, complete cds
          Length = 3207

 Score =  293 bits (148), Expect = 3e-76
 Identities = 226/252 (89%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaac 145
           |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 20  gccatggcggactcgcctgtggagctgccgggccggctcgccatactgccgttccgcaac 79

                                                                       
Query: 146 aaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcgtcaag 205
           ||||||||||| |||||||||||||| |||||||| ||||||| ||||||||| || |||
Sbjct: 80  aaggtgctcctgccgggcgccatcgtacggatccgctgcaccaaccccagcagtgtgaag 139

                                                                       
Query: 206 ctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttcccgtg 265
           ||||||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||| |||
Sbjct: 140 ctggtggagcaagagctctggcagaaggaggagaagggcctgattggggtacttcctgtg 199

                                                                       
Query: 266 cgggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgattca 325
           |||||||| |||||||| |||||||||||  | ||||| ||||| |||||| ||||||| 
Sbjct: 200 cgggactcagaggctgcagctgttggttcattgctgtctcctggtgtgggcagtgattcc 259

                       
Query: 326 ggggaaggaggc 337
           || || ||||||
Sbjct: 260 ggtgagggaggc 271



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                       
Query: 392 gggaaggagcccattcactggcacagccggggagttgctgctagagctctacacctttca 451
           |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| 
Sbjct: 320 gggaaggagcccattcactggcacagcaagggagttgctgctagagctttacacctttcc 379

                
Query: 452 agagg 456
           |||||
Sbjct: 380 agagg 384
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>gb|DQ002905.1| Oryza sativa (indica cultivar-group) lon protease lon1a (lon1)
           mRNA, complete sequence, alternatively spliced
          Length = 2986

 Score =  242 bits (122), Expect = 8e-61
 Identities = 161/174 (92%)
 Strand = Plus / Plus

                                                                       
Query: 85  ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 144
           |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 110 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 169

                                                                       
Query: 145 caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcgtcaa 204
           |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| || ||
Sbjct: 170 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcagtgtgaa 229

                                                                 
Query: 205 gctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 258
           ||| ||||||||||||||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 230 gcttgtggagcaggagctctggcaacgggaggagaagggtctgatcggggtgct 283



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                       
Query: 392 gggaaggagcccattcactggcacagccggggagttgctgctagagctctacacctttca 451
           ||||||||| ||||||||||||||||||||||||| |||||||| ||| | |||||||| 
Sbjct: 411 gggaaggagaccattcactggcacagccggggagtagctgctagggctttgcacctttcc 470

                
Query: 452 agagg 456
           |||||
Sbjct: 471 agagg 475
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>gb|AY129070.1| Oryza sativa (indica cultivar-group) Lon protease (Lon1) mRNA,
           complete cds
          Length = 2908

 Score =  242 bits (122), Expect = 8e-61
 Identities = 161/174 (92%)
 Strand = Plus / Plus

                                                                       
Query: 85  ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 144
           |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 110 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 169

                                                                       
Query: 145 caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcgtcaa 204
           |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| || ||
Sbjct: 170 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcagtgtgaa 229

                                                                 
Query: 205 gctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 258
           ||| ||||||||||||||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 230 gcttgtggagcaggagctctggcaacgggaggagaagggtctgatcggggtgct 283



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                       
Query: 392 gggaaggagcccattcactggcacagccggggagttgctgctagagctctacacctttca 451
           ||||||||| ||||||||||||||||||||||||| |||||||| ||| | |||||||| 
Sbjct: 411 gggaaggagaccattcactggcacagccggggagtagctgctagggctttgcacctttcc 470

                
Query: 452 agagg 456
           |||||
Sbjct: 471 agagg 475
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>gb|AY109454.1| Zea mays CL1713_1 mRNA sequence
          Length = 3184

 Score =  202 bits (102), Expect = 7e-49
 Identities = 213/250 (85%)
 Strand = Plus / Plus

                                                                       
Query: 88  catggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaacaa 147
           |||| ||||| ||||||||||||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 123 catgtcggactcgccggtggagctgccgagccggctcgccgtactgcccttccgcaacaa 182

                                                                       
Query: 148 ggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcgtcaagct 207
           |||||| ||||| || |||||||||||||| || ||||||| |||||| || || |||||
Sbjct: 183 ggtgctgctccccggtgccatcgtgcggattcgctgcaccaaccccagtagtgtgaagct 242

                                                                       
Query: 208 ggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttcccgtgcg 267
           ||||||||| || |||||||||| ||| || || || ||||| ||||| ||||| |||||
Sbjct: 243 ggtggagcaagaactctggcagaaggaagagaaaggcctgatcggggtacttcctgtgcg 302

                                                                       
Query: 268 ggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgattcagg 327
           |||||| |||||  | |||||||| ||  | ||||| ||||| |||||| ||||||||||
Sbjct: 303 ggactcggaggcaacagctgttggctctttgctgtctcctggtgtgggcagtgattcagg 362

                     
Query: 328 ggaaggaggc 337
            |||||||||
Sbjct: 363 tgaaggaggc 372



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 392 gggaaggagcccattcactggcacagccggggagttgctgctagagctctacacctttca 451
           |||||||||||||||||||||||||||  |||||||||||| |||||| |||||||||| 
Sbjct: 424 gggaaggagcccattcactggcacagcaagggagttgctgccagagctttacacctttcc 483

                
Query: 452 agagg 456
           |||||
Sbjct: 484 agagg 488
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>gb|U85494.1|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complete cds
          Length = 3217

 Score =  202 bits (102), Expect = 7e-49
 Identities = 213/250 (85%)
 Strand = Plus / Plus

                                                                       
Query: 88  catggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaacaa 147
           |||| ||||| ||||||||||||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 123 catgtcggactcgccggtggagctgccgagccggctcgccgtactgcccttccgcaacaa 182

                                                                       
Query: 148 ggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagcgtcaagct 207
           |||||| ||||| || |||||||||||||| || ||||||| |||||| || || |||||
Sbjct: 183 ggtgctgctccccggtgccatcgtgcggattcgctgcaccaaccccagtagtgtgaagct 242

                                                                       
Query: 208 ggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttcccgtgcg 267
           ||||||||| || |||||||||| ||| || || || ||||| ||||| ||||| |||||
Sbjct: 243 ggtggagcaagaactctggcagaaggaagagaaaggcctgatcggggtacttcctgtgcg 302

                                                                       
Query: 268 ggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgattcagg 327
           |||||| |||||  | |||||||| ||  | ||||| ||||| |||||| ||||||||||
Sbjct: 303 ggactcggaggcaacagctgttggctctttgctgtctcctggtgtgggcagtgattcagg 362

                     
Query: 328 ggaaggaggc 337
            |||||||||
Sbjct: 363 tgaaggaggc 372



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 392 gggaaggagcccattcactggcacagccggggagttgctgctagagctctacacctttca 451
           |||||||||||||||||||||||||||  |||||||||||| |||||| |||||||||| 
Sbjct: 424 gggaaggagcccattcactggcacagcaagggagttgctgccagagctttacacctttcc 483

                
Query: 452 agagg 456
           |||||
Sbjct: 484 agagg 488
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 85       ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 144
                |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 20651375 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 20651316

                                                                      
Query: 145      caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcag 198
                |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 20651315 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcag 20651262



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 203      aagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 258
                ||||| ||||||||||| ||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 20650550 aagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgct 20650495



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 392      gggaaggagcccattcactggcacagccgg 421
                ||||||||| ||||||||||||||||||||
Sbjct: 20650254 gggaaggagaccattcactggcacagccgg 20650225
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>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 85    ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 144
             |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 44986 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 44927

                                                                   
Query: 145   caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcag 198
             |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 44926 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcag 44873



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 203   aagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 258
             ||||| ||||||||||| ||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 44161 aagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgct 44106



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 392   gggaaggagcccattcactggcacagccgg 421
             ||||||||| ||||||||||||||||||||
Sbjct: 43865 gggaaggagaccattcactggcacagccgg 43836
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0515E01
          Length = 140063

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 85     ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 144
              |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 117033 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 116974

                                                                    
Query: 145    caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcag 198
              |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 116973 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcag 116920



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                      
Query: 203    aagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 258
              ||||| ||||||||||| ||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 116208 aagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgct 116153



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 392    gggaaggagcccattcactggcacagccgg 421
              ||||||||| ||||||||||||||||||||
Sbjct: 115912 gggaaggagaccattcactggcacagccgg 115883
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 392    gggaaggagcccattcactggcaca 416
              |||||||||||||||||||||||||
Sbjct: 256243 gggaaggagcccattcactggcaca 256267
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>dbj|D85610.1| Spinacia oleracea mRNA for ATP-dependent protease Lon, complete cds
          Length = 3101

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 405 ttcactggcacagccggggagttgctgctagagctctacacctttcaagagg 456
           |||| ||||||| | ||||||| |||||| ||||  ||||||||||||||||
Sbjct: 427 ttcattggcacaccaggggagtggctgctcgagccttacacctttcaagagg 478
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>gb|AC139621.4| Artibeus jamaicensis clone 47H5, complete sequence
          Length = 103728

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 218   gagctctggcagagggaggaca 239
             ||||||||||||||||||||||
Sbjct: 36338 gagctctggcagagggaggaca 36317
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>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold
          Length = 584809

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 218    gagctctggcagagggaggaca 239
              ||||||||||||||||||||||
Sbjct: 207169 gagctctggcagagggaggaca 207148
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>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete
              sequence
          Length = 175562

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 385    aaagagcgggaaggagcccat 405
              |||||||||||||||||||||
Sbjct: 148470 aaagagcgggaaggagcccat 148490
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 93      cggacgcgccggtggagctgccggg 117
               |||||||||||| ||||||||||||
Sbjct: 2183694 cggacgcgccggcggagctgccggg 2183718
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>gb|AY676875.1| Pseudomonas putida strain 3SK lipolytic autotransporter enzyme
           (EstA) gene, complete cds
          Length = 1941

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 aggccgccggtcgcctggtg 353
           ||||||||||||||||||||
Sbjct: 557 aggccgccggtcgcctggtg 576
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>ref|XM_479695.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 81  cggcggccatggcggacgcgccggtgga 108
           ||||||| ||||||| ||||||||||||
Sbjct: 569 cggcggcgatggcgggcgcgccggtgga 596
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>gb|AY430948.1| Uncultured prokaryote clone 828-2 AclB (aclB) gene, partial cds
          Length = 333

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgatgcaccacccccagca 197
           ||||||||||||||||||||
Sbjct: 303 ccgatgcaccacccccagca 322
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>gb|AC123531.4| Mus musculus BAC clone RP24-289C11 from chromosome 15, complete
             sequence
          Length = 165766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 424   agttgctgctagagctctacacct 447
             ||||||||||||||||| ||||||
Sbjct: 22555 agttgctgctagagctccacacct 22532
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>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence
          Length = 207904

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   agttgctgctagagctctacacct 447
             ||||||||||||||||| ||||||
Sbjct: 40589 agttgctgctagagctccacacct 40612
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     cgtcggcggccatggcggacgcgc 101
              |||||||||||||||||| |||||
Sbjct: 691116 cgtcggcggccatggcggccgcgc 691093
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      acagcagtgcgtcggcggcc 88
               ||||||||||||||||||||
Sbjct: 3158426 acagcagtgcgtcggcggcc 3158407
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>gb|AY321492.1| Pseudomonas putida copABCD operon, complete sequence
          Length = 3865

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gcgtcggcggccatggcgga 96
            ||||||||||||||||||||
Sbjct: 1771 gcgtcggcggccatggcgga 1752
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>emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chromosome 10 Contains a
             novel gene, the HPS1 gene for Hermansky-Pudlak syndrome 1,
             the 3' end of the HPSE2 gene for heparanase 2 and a CpG
             island, complete sequence
          Length = 143463

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   agcaaacaggatgcaaagag 390
             ||||||||||||||||||||
Sbjct: 36472 agcaaacaggatgcaaagag 36491
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     ctgccgggacggctcgccat 129
               ||||||||||||||||||||
Sbjct: 2236237 ctgccgggacggctcgccat 2236256
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>dbj|AK123713.1| Homo sapiens cDNA FLJ41719 fis, clone HLUNG2013204, moderately
           similar to Phytoene dehydrogenase-like
          Length = 2021

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 agcaaacaggatgcaaagag 390
           ||||||||||||||||||||
Sbjct: 386 agcaaacaggatgcaaagag 367
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>dbj|AP005226.1| Corynebacterium efficiens plasmid pCE3 DNA, complete sequence
          Length = 48672

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   cgtcaagctggtggagcagg 218
             ||||||||||||||||||||
Sbjct: 30747 cgtcaagctggtggagcagg 30766
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 81     cggcggccatggcggacgcgccggtgga 108
              ||||||| ||||||| ||||||||||||
Sbjct: 302417 cggcggcgatggcgggcgcgccggtgga 302444
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>gb|AC013471.7| Homo sapiens BAC clone RP11-489A14 from 2, complete sequence
          Length = 145040

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  agcaaacaggatgcaaagag 390
            ||||||||||||||||||||
Sbjct: 7117 agcaaacaggatgcaaagag 7136
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>gb|AE004924.1| Pseudomonas aeruginosa PAO1, section 485 of 529 of the complete
            genome
          Length = 11101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  aggccgccggtcgcctggtg 353
            ||||||||||||||||||||
Sbjct: 2169 aggccgccggtcgcctggtg 2150
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>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 81    cggcggccatggcggacgcgccggtgga 108
             ||||||| ||||||| ||||||||||||
Sbjct: 11931 cggcggcgatggcgggcgcgccggtgga 11958
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 81    cggcggccatggcggacgcgccggtgga 108
             ||||||| ||||||| ||||||||||||
Sbjct: 68843 cggcggcgatggcgggcgcgccggtgga 68870
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>emb|AJ277638.1|PAE277638 Pseudomonas aeruginosa papA gene
          Length = 1992

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 aggccgccggtcgcctggtg 353
           ||||||||||||||||||||
Sbjct: 608 aggccgccggtcgcctggtg 627
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>gb|AF005091.1|AF005091 Pseudomonas aeruginosa lipase/esterase (estA) gene, complete cds
          Length = 2004

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 aggccgccggtcgcctggtg 353
           ||||||||||||||||||||
Sbjct: 577 aggccgccggtcgcctggtg 596
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>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence
          Length = 166914

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ctctggcagagggaggacaa 240
              ||||||||||||||||||||
Sbjct: 155406 ctctggcagagggaggacaa 155425
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>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete
              sequence
          Length = 226637

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    acaggatgcaaagagcggga 395
              ||||||||||||||||||||
Sbjct: 107413 acaggatgcaaagagcggga 107394


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,295,245
Number of Sequences: 3902068
Number of extensions: 3295245
Number of successful extensions: 64608
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64247
Number of HSP's gapped (non-prelim): 361
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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