ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.014
2gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Canc... 44 0.22
3emb|BX571771.5| Zebrafish DNA sequence from clone CH211-160F8 in... 44 0.22
4dbj|AK052875.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 44 0.22
5gb|AC158620.6| Mus musculus 10 BAC RP23-288C18 (Roswell Park Can... 44 0.22
6emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 i... 44 0.22
7dbj|AB039951.1| Bacillus subtilis yuxH, yuzC, degQ, comQ, comX, ... 44 0.22
8dbj|AB010576.1| Bacillus subtilis ComX, ComQ and DegQ genes, com... 44 0.22
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.88
10emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chr... 42 0.88
11gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.88
12emb|AL033527.26|HS118J21 Human DNA sequence from clone RP1-118J2... 42 0.88
13dbj|AK093659.1| Homo sapiens cDNA FLJ36340 fis, clone THYMU2006468 42 0.88
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.88
15gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome ... 42 0.88
16emb|AL033526.24|HS110F11 Human DNA sequence from clone RP1-110F1... 42 0.88
17gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, com... 42 0.88
18gb|AY842444.1| Homo sapiens fatty acid amide hydrolase (FAAH) ge... 40 3.5
19gb|AC087434.3| Pan troglodytes clone RP43-90F9, complete sequence 40 3.5
20gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
21gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, com... 40 3.5
22gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 3.5
23gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, com... 40 3.5
24emb|AL591178.12| Human DNA sequence from clone RP11-293P20 on ch... 40 3.5
25emb|AL161786.12| Human DNA sequence from clone RP11-344L17 on ch... 40 3.5
26emb|AL122001.32|HSJ603I14 Human DNA sequence from clone RP4-603I... 40 3.5
27emb|AL035703.21|HS61A9 Human DNA sequence from clone RP1-61A9 on... 40 3.5
28emb|AL031658.11|HS310O13 Human DNA sequence from clone RP1-310O1... 40 3.5
29gb|AC105280.3| Homo sapiens chromosome 1 clone RP5-1199C23, comp... 40 3.5
30gb|AC069175.8| Homo sapiens chromosome 11, clone RP11-995N21, co... 40 3.5
31emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, com... 40 3.5
32gb|AC116427.1| Homo sapiens chromosome 5 clone CTD-2316N20, comp... 40 3.5
33gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361... 40 3.5
34gb|AC026400.4| Homo sapiens chromosome 5 clone CTB-173O12, compl... 40 3.5
35gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, com... 40 3.5
36emb|BX935144.2| Gallus gallus finished cDNA, clone ChEST868g5 40 3.5
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
38gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, compl... 40 3.5
39gb|AC138819.3| Homo sapiens chromosome 5 clone RP11-1101H11, com... 40 3.5
40gb|AC140125.3| Homo sapiens chromosome 5 clone RP11-1026M7, comp... 40 3.5
41gb|AC139667.5| Homo sapiens 3 BAC RP11-88B8 (Roswell Park Cancer... 40 3.5
42gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, com... 40 3.5
43gb|U63721.1|HSU63721 Human elastin (ELN) gene, partial cds, and ... 40 3.5
44gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complet... 40 3.5
45gb|AC091114.11| Homo sapiens chromosome 8, clone RP11-136O12, co... 40 3.5
46gb|AC116614.6| Homo sapiens BAC clone CTD-2029L3 from 2, complet... 40 3.5
47emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chr... 40 3.5
48gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
49gb|U62293.1|HSU62293 Human LIM-kinase1 and alternatively spliced... 40 3.5
50emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chr... 40 3.5
51emb|AL731652.1| Dog DNA sequence from clone RP81-70I6, complete ... 40 3.5
52gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q... 40 3.5
53gb|AC104319.3| Homo sapiens chromosome 8 clone RP11-407G9 map 8q... 40 3.5
54dbj|AB046872.1| Physcomitrella patens Sig2 mRNA for PpSIG2, comp... 40 3.5
55dbj|AB059356.1| Physcomitrella patens Sig2 gene for PpSIG2, comp... 40 3.5 
>dbj|AK072741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136H15,
          full insert sequence
          Length = 3559

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 10 ctctgcccttgcccctgccccgccccgc 37
          ||||||| ||||||||||||||||||||
Sbjct: 56 ctctgcctttgcccctgccccgccccgc 29
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>gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 171839

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   cctcctctctcctgctcagtcc 122
             ||||||||||||||||||||||
Sbjct: 29152 cctcctctctcctgctcagtcc 29131
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>emb|BX571771.5| Zebrafish DNA sequence from clone CH211-160F8 in linkage group 21,
             complete sequence
          Length = 162245

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 96    ctcttcctcctctctcctgctc 117
             ||||||||||||||||||||||
Sbjct: 87714 ctcttcctcctctctcctgctc 87735
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>dbj|AK052875.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830016F14 product:mitogen activated
           protein kinase kinase kinase 5, full insert sequence
          Length = 2647

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 cctcctctctcctgctcagtcc 122
           ||||||||||||||||||||||
Sbjct: 516 cctcctctctcctgctcagtcc 537
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>gb|AC158620.6| Mus musculus 10 BAC RP23-288C18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 179342

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 101    cctcctctctcctgctcagtcc 122
              ||||||||||||||||||||||
Sbjct: 137896 cctcctctctcctgctcagtcc 137875
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>emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 in linkage group 21,
             complete sequence
          Length = 130141

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 96    ctcttcctcctctctcctgctc 117
             ||||||||||||||||||||||
Sbjct: 45156 ctcttcctcctctctcctgctc 45135
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>dbj|AB039951.1| Bacillus subtilis yuxH, yuzC, degQ, comQ, comX, comP, comA, yuxO
           genes, partial and complete cds
          Length = 6114

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 149 ctcgcgggagctctcgcgccgc 170
           ||||||||||||||||||||||
Sbjct: 516 ctcgcgggagctctcgcgccgc 495
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>dbj|AB010576.1| Bacillus subtilis ComX, ComQ and DegQ genes, complete cds
          Length = 2517

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 149 ctcgcgggagctctcgcgccgc 170
           ||||||||||||||||||||||
Sbjct: 516 ctcgcgggagctctcgcgccgc 495
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 13       tgcccttgcccctgccccgccccgc 37
                |||| ||||||||||||||||||||
Sbjct: 10950976 tgcctttgcccctgccccgccccgc 10951000
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>emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chromosome 1 Contains the
             3' end of the MACF1 gene for microtubule-actin
             crosslinking factor 1, the BMP8A gene for bone
             morphogenetic protein 8A, a 3-oxoacid CoA transferase 2
             (OXCT2) pseudogene, a novel gene, a peptidylprolyl
             isomerase E (cyclophilin E) (PPIE) pseudogene, the 3' end
             of the PABPC4 gene for cytoplasmic 4 (inducible form)
             poly(A) binding protein, part of a novel gene and two CpG
             islands, complete sequence
          Length = 115968

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    ctctgcccttgcccctgcccc 30
             |||||||||||||||||||||
Sbjct: 67029 ctctgcccttgcccctgcccc 67049
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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 13    tgcccttgcccctgccccgccccgc 37
             |||| ||||||||||||||||||||
Sbjct: 30053 tgcctttgcccctgccccgccccgc 30029
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>emb|AL033527.26|HS118J21 Human DNA sequence from clone RP1-118J21 on chromosome 1p34.1-35.3
            Contains the 5' end of the BMP8B gene for  bone
            morphogenetic protein 8b (osteogenic protein 2), the 3'
            end of the PPIE gene for peptidylprolyl isomerase E
            (cyclophilin E), the OXCT2 gene for 3-oxoacid CoA
            transferase 2, the gene for tRNA isopentenyltransferase 1
            (IPT), the MYCL1 gene for v-myc myelocytomatosis viral
            oncogene homolog 1 lung carcinoma derived (avian), a
            novel gene and seven CpG islands, complete sequence
          Length = 166496

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 10   ctctgcccttgcccctgcccc 30
            |||||||||||||||||||||
Sbjct: 2491 ctctgcccttgcccctgcccc 2471
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>dbj|AK093659.1| Homo sapiens cDNA FLJ36340 fis, clone THYMU2006468
          Length = 2235

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 10   ctctgcccttgcccctgcccc 30
            |||||||||||||||||||||
Sbjct: 1419 ctctgcccttgcccctgcccc 1399
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 13       tgcccttgcccctgccccgccccgc 37
                |||| ||||||||||||||||||||
Sbjct: 10949077 tgcctttgcccctgccccgccccgc 10949101
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>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence
          Length = 209970

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 10    ctctgcccttgcccctgccccgccccgcc 38
             |||||||| |||||| |||||||||||||
Sbjct: 97989 ctctgcccctgcccccgccccgccccgcc 97961
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>emb|AL033526.24|HS110F11 Human DNA sequence from clone RP1-110F11 on chromosome 1p33-34.3,
             complete sequence
          Length = 112339

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    ctctgcccttgcccctgcccc 30
             |||||||||||||||||||||
Sbjct: 22720 ctctgcccttgcccctgcccc 22740
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>gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, complete sequence
          Length = 211802

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 100    tcctcctctctcctgctcagtcctccctc 128
              |||||||| ||||| ||||||||||||||
Sbjct: 113748 tcctcctccctcctcctcagtcctccctc 113776
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>gb|AY842444.1| Homo sapiens fatty acid amide hydrolase (FAAH) gene, complete cds
          Length = 22876

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgcccctgccccgccccgcc 38
             ||||||||||||||||||||
Sbjct: 12873 tgcccctgccccgccccgcc 12854
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>gb|AC087434.3| Pan troglodytes clone RP43-90F9, complete sequence
          Length = 161716

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    ctgcccttgcccctgccccgcccc 35
             |||||| |||||||||||||||||
Sbjct: 15141 ctgcccctgcccctgccccgcccc 15118
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>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041C22, complete sequence
          Length = 161172

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgcccctgccccgccccgcc 38
             ||||||||||||||||||||
Sbjct: 58701 tgcccctgccccgccccgcc 58682
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>gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, complete sequence
          Length = 232751

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    ctgcccttgcccctgccccgcccc 35
             |||||| |||||||||||||||||
Sbjct: 69570 ctgcccctgcccctgccccgcccc 69547
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     gccgccccgctccgtcgccg 185
               ||||||||||||||||||||
Sbjct: 1939467 gccgccccgctccgtcgccg 1939486
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>gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, complete sequence
          Length = 158075

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    ctgcccttgcccctgccccgcccc 35
             |||||| |||||||||||||||||
Sbjct: 33455 ctgcccctgcccctgccccgcccc 33478
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>emb|AL591178.12| Human DNA sequence from clone RP11-293P20 on chromosome 1 Contains
             three novel genes and the 3' end of the IL22RA1 gene for
             interleukin 22 receptor alpha 1, complete sequence
          Length = 100116

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    ctgcccttgcccctgccccgcccc 35
             |||||| |||||||||||||||||
Sbjct: 67787 ctgcccctgcccctgccccgcccc 67810
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>emb|AL161786.12| Human DNA sequence from clone RP11-344L17 on chromosome 9 Contains the
             5' end of a novel gene (MGC20553), complete sequence
          Length = 145676

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    cttcctcctctctcctgctc 117
             ||||||||||||||||||||
Sbjct: 68135 cttcctcctctctcctgctc 68154
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>emb|AL122001.32|HSJ603I14 Human DNA sequence from clone RP4-603I14 on chromosome 1p31.3-33
             Contains the 5' end of the gene for MUF1 protein (MUF1),
             the UQCRH gene for ubiquinol-cytochrome c reductase hinge
             protein, gene MGC22960 (FLJ40205, FLJ32858, FLJ46186), the
             FAAH gene for fatty acid amide hydrolase and a CpG island,
             complete sequence
          Length = 126613

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tgcccctgccccgccccgcc 38
             ||||||||||||||||||||
Sbjct: 18407 tgcccctgccccgccccgcc 18426
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>emb|AL035703.21|HS61A9 Human DNA sequence from clone RP1-61A9 on chromosome 1p35.2-36.13
             Contains a novel gene (KIAA0478) and the EPHA8 gene for
             ephrin receptor EphA8 precursor, complete sequence
          Length = 160705

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    gcccctgccccgccccgccg 39
             ||||||||||||||||||||
Sbjct: 65524 gcccctgccccgccccgccg 65543
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>emb|AL031658.11|HS310O13 Human DNA sequence from clone RP1-310O13 on chromosome 20q11.2 Contains
              the 3' end of the C20orf125 gene, the C20orf126 gene, the
              C20orf159 gene, the C20orf160 gene, a novel gene and four
              CpG islands, complete sequence
          Length = 162976

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     ctgcccttgcccctgccccgcccc 35
              |||||| |||||||||||||||||
Sbjct: 130596 ctgcccctgcccctgccccgcccc 130573
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>gb|AC105280.3| Homo sapiens chromosome 1 clone RP5-1199C23, complete sequence
          Length = 70624

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ctgcccttgcccctgccccg 31
             ||||||||||||||||||||
Sbjct: 24857 ctgcccttgcccctgccccg 24876
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>gb|AC069175.8| Homo sapiens chromosome 11, clone RP11-995N21, complete sequence
          Length = 225957

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ctgcccttgcccctgccccg 31
              ||||||||||||||||||||
Sbjct: 216668 ctgcccttgcccctgccccg 216649
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>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence
          Length = 197615

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    tcgcgccgccccgctccgtc 181
              ||||||||||||||||||||
Sbjct: 102700 tcgcgccgccccgctccgtc 102681
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>gb|AC116427.1| Homo sapiens chromosome 5 clone CTD-2316N20, complete sequence
          Length = 103938

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 12    ctgcccttgcccctgccccgccccgccg 39
             ||||||| |||||||||||| |||||||
Sbjct: 44077 ctgccctggcccctgccccggcccgccg 44104
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>gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361O12, complete sequence
          Length = 211611

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    cctcttcctcctctctcctg 114
             ||||||||||||||||||||
Sbjct: 75898 cctcttcctcctctctcctg 75879
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>gb|AC026400.4| Homo sapiens chromosome 5 clone CTB-173O12, complete sequence
          Length = 118469

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 12    ctgcccttgcccctgccccgccccgccg 39
             ||||||| |||||||||||| |||||||
Sbjct: 46335 ctgccctggcccctgccccggcccgccg 46362
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>gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, complete sequence
          Length = 174714

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 94   gcctcttcctcctctctcctgctc 117
            |||||| |||||||||||||||||
Sbjct: 8993 gcctctgcctcctctctcctgctc 8970
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>emb|BX935144.2| Gallus gallus finished cDNA, clone ChEST868g5
          Length = 867

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 165 cgccgccccgctccgtcgcc 184
           ||||||||||||||||||||
Sbjct: 29  cgccgccccgctccgtcgcc 10
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       tgcccctgccccgccccgcc 38
                ||||||||||||||||||||
Sbjct: 14835164 tgcccctgccccgccccgcc 14835145
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>gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, complete sequence
          Length = 173607

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 12    ctgcccttgcccctgccccgccccgccg 39
             ||||||| |||||||||||| |||||||
Sbjct: 86492 ctgccctggcccctgccccggcccgccg 86465
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>gb|AC138819.3| Homo sapiens chromosome 5 clone RP11-1101H11, complete sequence
          Length = 182715

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 12    ctgcccttgcccctgccccgccccgccg 39
             ||||||| |||||||||||| |||||||
Sbjct: 48797 ctgccctggcccctgccccggcccgccg 48770
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>gb|AC140125.3| Homo sapiens chromosome 5 clone RP11-1026M7, complete sequence
          Length = 217057

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 12     ctgcccttgcccctgccccgccccgccg 39
              ||||||| |||||||||||| |||||||
Sbjct: 193615 ctgccctggcccctgccccggcccgccg 193588
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>gb|AC139667.5| Homo sapiens 3 BAC RP11-88B8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 135668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     gcccctgccccgccccgccg 39
              ||||||||||||||||||||
Sbjct: 128844 gcccctgccccgccccgccg 128863
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>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence
          Length = 180623

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 94     gcctcttcctcctctctcctgctc 117
              |||||| |||||||||||||||||
Sbjct: 100327 gcctctgcctcctctctcctgctc 100304
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>gb|U63721.1|HSU63721 Human elastin (ELN) gene, partial cds, and LIM-kinase (LIMK1) gene,
             complete cds
          Length = 67046

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    ctgcccttgcccctgccccgcccc 35
             |||||| |||||||||||||||||
Sbjct: 33616 ctgcccctgcccctgccccgcccc 33593
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>gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complete sequence
          Length = 106992

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    cctcttcctcctctctcctgctca 118
             ||||||||||||||||| ||||||
Sbjct: 77852 cctcttcctcctctctcgtgctca 77829
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>gb|AC091114.11| Homo sapiens chromosome 8, clone RP11-136O12, complete sequence
          Length = 182291

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ctctctcctgctcagtcctc 124
              ||||||||||||||||||||
Sbjct: 166694 ctctctcctgctcagtcctc 166675
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>gb|AC116614.6| Homo sapiens BAC clone CTD-2029L3 from 2, complete sequence
          Length = 129814

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    ctgcccttgcccctgccccgcccc 35
             |||||| |||||||||||||||||
Sbjct: 28301 ctgcccctgcccctgccccgcccc 28324
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>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete
              sequence
          Length = 249562

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    ctctctcctgctcagtcctccctc 128
              ||||||||||||||| ||||||||
Sbjct: 134677 ctctctcctgctcaggcctccctc 134700
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       tgcccctgccccgccccgcc 38
                ||||||||||||||||||||
Sbjct: 14915602 tgcccctgccccgccccgcc 14915583
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>gb|U62293.1|HSU62293 Human LIM-kinase1 and alternatively spliced LIM-kinase1 (LIMK1) gene,
            complete cds
          Length = 65608

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   ctgcccttgcccctgccccgcccc 35
            |||||| |||||||||||||||||
Sbjct: 9973 ctgcccctgcccctgccccgcccc 9950
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>emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chromosome 2, complete
             sequence
          Length = 209452

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    gcctcttcctcctctctcct 113
             ||||||||||||||||||||
Sbjct: 54386 gcctcttcctcctctctcct 54405
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>emb|AL731652.1| Dog DNA sequence from clone RP81-70I6, complete sequence
          Length = 169460

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    cccttgcccctgccccgccccgcc 38
             |||||||||| |||||||||||||
Sbjct: 29683 cccttgcccccgccccgccccgcc 29660
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>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete
             sequence
          Length = 199668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   ctctctcctgctcagtcctc 124
             ||||||||||||||||||||
Sbjct: 40406 ctctctcctgctcagtcctc 40387
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>gb|AC104319.3| Homo sapiens chromosome 8 clone RP11-407G9 map 8q24.2, complete sequence
          Length = 216749

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ctctctcctgctcagtcctc 124
              ||||||||||||||||||||
Sbjct: 196803 ctctctcctgctcagtcctc 196784
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>dbj|AB046872.1| Physcomitrella patens Sig2 mRNA for PpSIG2, complete cds
          Length = 2207

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  cgcctcttcctcctctctcc 112
           ||||||||||||||||||||
Sbjct: 918 cgcctcttcctcctctctcc 899
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>dbj|AB059356.1| Physcomitrella patens Sig2 gene for PpSIG2, complete cds
          Length = 3439

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   cgcctcttcctcctctctcc 112
            ||||||||||||||||||||
Sbjct: 1427 cgcctcttcctcctctctcc 1408


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,131,173
Number of Sequences: 3902068
Number of extensions: 2131173
Number of successful extensions: 73328
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73088
Number of HSP's gapped (non-prelim): 240
length of query: 269
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 247
effective length of database: 17,147,199,772
effective search space: 4235358343684
effective search space used: 4235358343684
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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