ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476650.1| Oryza sativa (japonica cultivar-group), mRNA 242 7e-61
2dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 7e-61
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
4dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 1e-07
6gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 66 1e-07
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
8dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
9gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e ... 44 0.35
10gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.4
11gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complet... 42 1.4
12emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
13gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.4
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
15dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
16gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 5.4
17ref|XM_508471.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 5.4
18emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.4
19gb|BC077719.1| Homo sapiens von Willebrand factor C and EGF doma... 40 5.4
20gb|BC052564.1| Homo sapiens von Willebrand factor C and EGF doma... 40 5.4
21gb|BC042143.1| Homo sapiens von Willebrand factor C and EGF doma... 40 5.4
22gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene clust... 40 5.4
23gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, com... 40 5.4
24dbj|AK056571.1| Homo sapiens cDNA FLJ32009 fis, clone NT2RP70094... 40 5.4
25gb|AE012049.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.4
26gb|AF499022.1| Baboon herpesvirus 2 strain OU1-76 terminase gene... 40 5.4
27gb|AF499021.1| Cercopithecine herpesvirus 2 strain B264 terminas... 40 5.4
28gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park... 40 5.4
29gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, com... 40 5.4
30ref|NM_152718.1| Homo sapiens von Willebrand factor C and EGF do... 40 5.4
31gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.4
32gb|AY205235.1| Homo sapiens URG11 mRNA, complete cds 40 5.4
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.4
34gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the ... 40 5.4
35gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 5.4
36dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 5.4 
>ref|XM_476650.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3250

 Score =  242 bits (122), Expect = 7e-61
 Identities = 263/310 (84%)
 Strand = Plus / Plus

                                                                       
Query: 91  ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 150
           |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 67  ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 126

                                                                       
Query: 151 cagactcgccgcccgccaccccggtcgccagttctgccggtgcttcatctcctcccgcgc 210
           | | |||||||||||||||||| ||||||||||| || ||||| ||||| || || || |
Sbjct: 127 cggcctcgccgcccgccacccccgtcgccagttcggctggtgcatcatcaccacctgcac 186

                                                                       
Query: 211 aaacaaatgtagctaccatagattggttaggcagtgggcagttatctaaagttgggtcat 270
           ||||||||| ||||| |||||||||||||||  ||| ||   |||| ||||| |  ||||
Sbjct: 187 aaacaaatgcagctagcatagattggttaggtggtgagccaatatccaaagtggaatcat 246

                                                                       
Query: 271 cgtcccatgttgcttcacatgccgctcaaccttctcttagtactaatgctgttggagctg 330
           | |||||  ||||| |||||||  |||  |||||||||||||||||||||| ||||||||
Sbjct: 247 catcccagattgctccacatgctcctcggccttctcttagtactaatgctgctggagctg 306

                                                                       
Query: 331 ctatggatttctcacaaccatcatgtagaccatgggaacgaggagatttacttcatcgac 390
           |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||  ||||
Sbjct: 307 ccgtggatttctctcaaccatcttgtagaccatgggaacgaggagacttgcttcggcgac 366

                     
Query: 391 tggccacatt 400
           ||||||||||
Sbjct: 367 tggccacatt 376
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>dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M17, full
           insert sequence
          Length = 3250

 Score =  242 bits (122), Expect = 7e-61
 Identities = 263/310 (84%)
 Strand = Plus / Plus

                                                                       
Query: 91  ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 150
           |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 67  ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 126

                                                                       
Query: 151 cagactcgccgcccgccaccccggtcgccagttctgccggtgcttcatctcctcccgcgc 210
           | | |||||||||||||||||| ||||||||||| || ||||| ||||| || || || |
Sbjct: 127 cggcctcgccgcccgccacccccgtcgccagttcggctggtgcatcatcaccacctgcac 186

                                                                       
Query: 211 aaacaaatgtagctaccatagattggttaggcagtgggcagttatctaaagttgggtcat 270
           ||||||||| ||||| |||||||||||||||  ||| ||   |||| ||||| |  ||||
Sbjct: 187 aaacaaatgcagctagcatagattggttaggtggtgagccaatatccaaagtggaatcat 246

                                                                       
Query: 271 cgtcccatgttgcttcacatgccgctcaaccttctcttagtactaatgctgttggagctg 330
           | |||||  ||||| |||||||  |||  |||||||||||||||||||||| ||||||||
Sbjct: 247 catcccagattgctccacatgctcctcggccttctcttagtactaatgctgctggagctg 306

                                                                       
Query: 331 ctatggatttctcacaaccatcatgtagaccatgggaacgaggagatttacttcatcgac 390
           |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||  ||||
Sbjct: 307 ccgtggatttctctcaaccatcttgtagaccatgggaacgaggagacttgcttcggcgac 366

                     
Query: 391 tggccacatt 400
           ||||||||||
Sbjct: 367 tggccacatt 376
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  155 bits (78), Expect = 1e-34
 Identities = 186/222 (83%)
 Strand = Plus / Minus

                                                                           
Query: 179     cagttctgccggtgcttcatctcctcccgcgcaaacaaatgtagctaccatagattggtt 238
               |||||| || ||||| ||||| || || || |||||||||| ||||| ||||||||||||
Sbjct: 2671602 cagttcggctggtgcatcatcaccacctgcacaaacaaatgcagctagcatagattggtt 2671543

                                                                           
Query: 239     aggcagtgggcagttatctaaagttgggtcatcgtcccatgttgcttcacatgccgctca 298
               |||  ||| ||   |||| ||||| |  ||||| |||||  ||||| |||||||  ||| 
Sbjct: 2671542 aggtggtgagccaatatccaaagtggaatcatcatcccagattgctccacatgctcctcg 2671483

                                                                           
Query: 299     accttctcttagtactaatgctgttggagctgctatggatttctcacaaccatcatgtag 358
                |||||||||||||||||||||| |||||||||  |||||||||| |||||||| |||||
Sbjct: 2671482 gccttctcttagtactaatgctgctggagctgccgtggatttctctcaaccatcttgtag 2671423

                                                         
Query: 359     accatgggaacgaggagatttacttcatcgactggccacatt 400
               |||||||||||||||||| || ||||  ||||||||||||||
Sbjct: 2671422 accatgggaacgaggagacttgcttcggcgactggccacatt 2671381



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                           
Query: 91      ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 150
               |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 2672576 ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 2672517

                                              
Query: 151     cagactcgccgcccgccaccccggtcgccag 181
               | | |||||||||||||||||| ||||||||
Sbjct: 2672516 cggcctcgccgcccgccacccccgtcgccag 2672486
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>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1027_G06
          Length = 121885

 Score =  155 bits (78), Expect = 1e-34
 Identities = 186/222 (83%)
 Strand = Plus / Minus

                                                                         
Query: 179   cagttctgccggtgcttcatctcctcccgcgcaaacaaatgtagctaccatagattggtt 238
             |||||| || ||||| ||||| || || || |||||||||| ||||| ||||||||||||
Sbjct: 97320 cagttcggctggtgcatcatcaccacctgcacaaacaaatgcagctagcatagattggtt 97261

                                                                         
Query: 239   aggcagtgggcagttatctaaagttgggtcatcgtcccatgttgcttcacatgccgctca 298
             |||  ||| ||   |||| ||||| |  ||||| |||||  ||||| |||||||  ||| 
Sbjct: 97260 aggtggtgagccaatatccaaagtggaatcatcatcccagattgctccacatgctcctcg 97201

                                                                         
Query: 299   accttctcttagtactaatgctgttggagctgctatggatttctcacaaccatcatgtag 358
              |||||||||||||||||||||| |||||||||  |||||||||| |||||||| |||||
Sbjct: 97200 gccttctcttagtactaatgctgctggagctgccgtggatttctctcaaccatcttgtag 97141

                                                       
Query: 359   accatgggaacgaggagatttacttcatcgactggccacatt 400
             |||||||||||||||||| || ||||  ||||||||||||||
Sbjct: 97140 accatgggaacgaggagacttgcttcggcgactggccacatt 97099



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                         
Query: 91    ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 150
             |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 98294 ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 98235

                                            
Query: 151   cagactcgccgcccgccaccccggtcgccag 181
             | | |||||||||||||||||| ||||||||
Sbjct: 98234 cggcctcgccgcccgccacccccgtcgccag 98204
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 351      tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagcct 407
                |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| |||||||
Sbjct: 32294054 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcct 32293998
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 351   tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagcct 407
             |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| |||||||
Sbjct: 27821 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcct 27765
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 351      tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagcct 407
                |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| |||||||
Sbjct: 32384564 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcct 32384508
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>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full
           insert sequence
          Length = 3325

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 351 tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagcct 407
           |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| |||||||
Sbjct: 314 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcct 370
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>gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e In DGCR Region,
             complete sequence
          Length = 44426

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 45    cacctcacctggctctggctgg 66
             ||||||||||||||||||||||
Sbjct: 23380 cacctcacctggctctggctgg 23401
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 71      cgcatcgaggccgagcgcgcccgcc 95
               ||||||||| |||||||||||||||
Sbjct: 2952801 cgcatcgagcccgagcgcgcccgcc 2952777
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>gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complete sequence
          Length = 177206

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    tgagagaggaggtcaggagct 117
             |||||||||||||||||||||
Sbjct: 52952 tgagagaggaggtcaggagct 52932
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 71      cgcatcgaggccgagcgcgcccgcc 95
               ||||||||| |||||||||||||||
Sbjct: 1131404 cgcatcgagcccgagcgcgcccgcc 1131380
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 71     cgcatcgaggccgagcgcgcccgcc 95
              ||||||||| |||||||||||||||
Sbjct: 725999 cgcatcgagcccgagcgcgcccgcc 725975
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 122     ggcggcgcccgcggacccgccgctg 146
               |||||||||||||||| ||||||||
Sbjct: 3234636 ggcggcgcccgcggacgcgccgctg 3234660



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      tcgaggccgagcgcgcccgc 94
               ||||||||||||||||||||
Sbjct: 2151670 tcgaggccgagcgcgcccgc 2151689
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 121     cggcggcgcccgcggacccgccgctgcgc 149
               ||||||||||| |||||| ||||||||||
Sbjct: 3525958 cggcggcgccctcggaccggccgctgcgc 3525930
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aggagctcgtcggcggcgcc 130
             ||||||||||||||||||||
Sbjct: 33502 aggagctcgtcggcggcgcc 33483
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>ref|XM_508471.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ32009
            (LOC451233), mRNA
          Length = 3439

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 3072 gccggtgcttcatctcctcc 3091
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 155     ctcgccgcccgccaccccggtcgc 178
               |||||||| |||||||||||||||
Sbjct: 4700670 ctcgccgcacgccaccccggtcgc 4700693
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>gb|BC077719.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:6305035), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
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>gb|BC052564.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:6305411), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
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>gb|BC042143.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:5930956), partial cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
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>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence
          Length = 31310

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   cggcgcccgcggacccgccg 143
             ||||||||||||||||||||
Sbjct: 26728 cggcgcccgcggacccgccg 26747
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>gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, complete sequence
          Length = 121721

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   cacctcacctggctctggct 64
            ||||||||||||||||||||
Sbjct: 7566 cacctcacctggctctggct 7547
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>dbj|AK056571.1| Homo sapiens cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar to
            FIBULIN-1, ISOFORM A PRECURSOR
          Length = 3292

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2416 gccggtgcttcatctcctcc 2435
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>gb|AE012049.1| Xanthomonas axonopodis pv. citri str. 306,  section 427 of 469 of the
            complete genome
          Length = 10499

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 155  ctcgccgcccgccaccccggtcgc 178
            |||||||| |||||||||||||||
Sbjct: 8052 ctcgccgcacgccaccccggtcgc 8075
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>gb|AF499022.1| Baboon herpesvirus 2 strain OU1-76 terminase gene, partial cds
          Length = 363

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 aggagctcgtcggcggcgcc 130
           ||||||||||||||||||||
Sbjct: 65  aggagctcgtcggcggcgcc 46
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>gb|AF499021.1| Cercopithecine herpesvirus 2 strain B264 terminase gene, partial
           cds
          Length = 363

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 aggagctcgtcggcggcgcc 130
           ||||||||||||||||||||
Sbjct: 65  aggagctcgtcggcggcgcc 46
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>gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 182247

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    aaacaaatgtagctaccata 230
              ||||||||||||||||||||
Sbjct: 122156 aaacaaatgtagctaccata 122137
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>gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, complete sequence
          Length = 187204

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cacctcacctggctctggct 64
             ||||||||||||||||||||
Sbjct: 13687 cacctcacctggctctggct 13706
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>ref|NM_152718.1| Homo sapiens von Willebrand factor C and EGF domains (VWCE), mRNA
          Length = 3292

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2416 gccggtgcttcatctcctcc 2435
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tcgaggccgagcgcgcccgc 94
              ||||||||||||||||||||
Sbjct: 122075 tcgaggccgagcgcgcccgc 122094
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>gb|AY205235.1| Homo sapiens URG11 mRNA, complete cds
          Length = 3076

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2166 gccggtgcttcatctcctcc 2185
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     gctcgtcggcggcgcccgcg 134
               ||||||||||||||||||||
Sbjct: 2792255 gctcgtcggcggcgcccgcg 2792236



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     cggcggcgcccgcggacccg 140
               ||||||||||||||||||||
Sbjct: 2453693 cggcggcgcccgcggacccg 2453674
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>gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the complete genome
          Length = 13571

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    cgcatcgaggccgagcgcgc 90
             ||||||||||||||||||||
Sbjct: 11958 cgcatcgaggccgagcgcgc 11939
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aggagctcgtcggcggcgcc 130
             ||||||||||||||||||||
Sbjct: 34678 aggagctcgtcggcggcgcc 34659
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>dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2331C18, complete
             sequences
          Length = 121567

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gccggtgcttcatctcctcc 205
             ||||||||||||||||||||
Sbjct: 39149 gccggtgcttcatctcctcc 39130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,524,611
Number of Sequences: 3902068
Number of extensions: 3524611
Number of successful extensions: 63794
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62459
Number of HSP's gapped (non-prelim): 1331
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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