Clone Name | bastl13h09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 14 ccacatcggcgccgtaacatggcgtctcggggaggttacgaaggcggctccgccacggga 73 ||||||||||||||| ||||||| || ||||||| ||||| |||||||||| | | ||| Sbjct: 15903434 ccacatcggcgccgtcacatggcctcccggggagcctacgacggcggctccggcgccgga 15903493 Query: 74 ggcaagatccgtaggcgccctcccttccgcgccgc 108 ||||||||||| |||||||| || | ||||||||| Sbjct: 15903494 ggcaagatccggaggcgccccccgtcccgcgccgc 15903528 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tccttactcgccgccgccgccgcc 315 |||| ||||||||||||||||||| Sbjct: 27044656 tcctcactcgccgccgccgccgcc 27044633 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 23422091 ctcgccgccgccgccgcctt 23422072 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23156046 cgccgccgccgccgccttta 23156065
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 14 ccacatcggcgccgtaacatggcgtctcggggaggttacgaaggcggctccgccacggga 73 ||||||||||||||| ||||||| || ||||||| ||||| |||||||||| | | ||| Sbjct: 15856667 ccacatcggcgccgtcacatggcctcccggggagcctacgacggcggctccggcgccgga 15856726 Query: 74 ggcaagatccgtaggcgccctcccttccgcgccgc 108 ||||||||||| |||||||| || | ||||||||| Sbjct: 15856727 ggcaagatccggaggcgccccccgtcccgcgccgc 15856761 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tccttactcgccgccgccgccgcc 315 |||| ||||||||||||||||||| Sbjct: 26970245 tcctcactcgccgccgccgccgcc 26970222 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 23350282 ctcgccgccgccgccgcctt 23350263 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23084237 cgccgccgccgccgccttta 23084256
>emb|AL731754.3|CNS08C83 Oryza sativa chromosome 12, . BAC OJ1016_H08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113212 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 14 ccacatcggcgccgtaacatggcgtctcggggaggttacgaaggcggctccgccacggga 73 ||||||||||||||| ||||||| || ||||||| ||||| |||||||||| | | ||| Sbjct: 34000 ccacatcggcgccgtcacatggcctcccggggagcctacgacggcggctccggcgccgga 33941 Query: 74 ggcaagatccgtaggcgccctcccttccgcgccgc 108 ||||||||||| |||||||| || | ||||||||| Sbjct: 33940 ggcaagatccggaggcgccccccgtcccgcgccgc 33906
>ref|XM_480060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttta 319 ||||||||||||||||||||| Sbjct: 286 tcgccgccgccgccgccttta 266
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcct 316 ||||||||||||||||||||| Sbjct: 5935554 tactcgccgccgccgccgcct 5935574 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 34607926 ctcgccgccgccgccgcctt 34607945 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tctgccattgatggagatga 410 |||||||||||||||||||| Sbjct: 34605822 tctgccattgatggagatga 34605803 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 22178290 tactcgccgccgccgccgcc 22178309
>gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q11-q13, complete sequence Length = 140374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 aagaagaaacggaggagggac 356 ||||||||||||||||||||| Sbjct: 44494 aagaagaaacggaggagggac 44474
>gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, complete sequence Length = 140375 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 aagaagaaacggaggagggac 356 ||||||||||||||||||||| Sbjct: 44268 aagaagaaacggaggagggac 44248
>dbj|AK148269.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370070D23 product:tau tubulin kinase 1, full insert sequence Length = 3444 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 gccgccgccgccgcctttaga 321 ||||||||||||||||||||| Sbjct: 167 gccgccgccgccgcctttaga 187
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcct 316 ||||||||||||||||||||| Sbjct: 85176 tactcgccgccgccgccgcct 85196
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgccttt 318 ||||||||||||||||||||| Sbjct: 20358387 ctcgccgccgccgccgccttt 20358367
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttta 319 ||||||||||||||||||||| Sbjct: 2493673 tcgccgccgccgccgccttta 2493653 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 21020321 actcgccgccgccgccgcct 21020340 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttt 318 |||||||||||||||||||| Sbjct: 18660268 tcgccgccgccgccgccttt 18660249
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 ctccttactcgccgccgccgccgcc 315 |||||| |||||||||||||||||| Sbjct: 3401975 ctccttcctcgccgccgccgccgcc 3401951 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 24294651 cttactcgccgccgccgccg 24294670 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 12794257 tactcgccgccgccgccgcc 12794238 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cgccgccgccgccgcctttagaga 323 ||||||||||||||||||| |||| Sbjct: 431046 cgccgccgccgccgcctttcgaga 431069
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcct 316 ||||||||||||||||||||| Sbjct: 5934767 tactcgccgccgccgccgcct 5934787 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 34697998 ctcgccgccgccgccgcctt 34698017 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tctgccattgatggagatga 410 |||||||||||||||||||| Sbjct: 34695894 tctgccattgatggagatga 34695875 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 22171319 tactcgccgccgccgccgcc 22171338
>gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q11-q13, complete sequence Length = 237705 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 aagaagaaacggaggagggac 356 ||||||||||||||||||||| Sbjct: 181323 aagaagaaacggaggagggac 181303
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgccttt 318 ||||||||||||||||||||| Sbjct: 137514 ctcgccgccgccgccgccttt 137494
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0571B09 Length = 147382 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttta 319 ||||||||||||||||||||| Sbjct: 8030 tcgccgccgccgccgccttta 8010
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 ctccttactcgccgccgccgccgcc 315 |||||| |||||||||||||||||| Sbjct: 41795 ctccttcctcgccgccgccgccgcc 41771
>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665F09 Length = 147102 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttta 319 ||||||||||||||||||||| Sbjct: 55302 tcgccgccgccgccgccttta 55282
>dbj|AK066543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069G15, full insert sequence Length = 3552 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcct 316 ||||||||||||||||||||| Sbjct: 63 tactcgccgccgccgccgcct 83
>dbj|AK067700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118L17, full insert sequence Length = 2792 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 ctccttactcgccgccgccgccgcc 315 |||||| |||||||||||||||||| Sbjct: 198 ctccttcctcgccgccgccgccgcc 222
>emb|AL844885.4| Mouse DNA sequence from clone RP23-226E14 on chromosome 2, complete sequence Length = 129810 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 tcttgaagaagaaacggagga 351 ||||||||||||||||||||| Sbjct: 17283 tcttgaagaagaaacggagga 17263
>dbj|AK059096.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C05, full insert sequence Length = 576 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgccttt 318 ||||||||||||||||||||| Sbjct: 69 ctcgccgccgccgccgccttt 49
>gb|AC005331.2| Homo sapiens chromosome 19, cosmid R31341, complete sequence Length = 35581 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gcgtctcctctcctctgtgtt 231 ||||||||||||||||||||| Sbjct: 32004 gcgtctcctctcctctgtgtt 32024
>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177, complete sequence Length = 133589 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 gaagaagaaacggaggaggga 355 ||||||||||||||||||||| Sbjct: 93895 gaagaagaaacggaggaggga 93875
>ref|XM_482548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 121 actcgccgccgccgccgcct 102
>ref|NM_185086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tctgccattgatggagatga 410 |||||||||||||||||||| Sbjct: 988 tctgccattgatggagatga 1007 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 207 ctcgccgccgccgccgcctt 188
>ref|NM_184858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 911 tactcgccgccgccgccgcc 892
>ref|NM_187806.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1492 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 589 tactcgccgccgccgccgcc 608
>gb|BT018407.1| Zea mays clone EL01N0326A09.d mRNA sequence Length = 1456 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 851 tactcgccgccgccgccgcc 832
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 990067 actcgccgccgccgccgcct 990086
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 436678 tactcgccgccgccgccgcc 436697
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 61849 ctcgccgccgccgccgcctt 61830
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 36027 ctcgccgccgccgccgcctt 36008
>ref|XM_367814.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07718.4) partial mRNA Length = 2373 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccacgggaggcaagatccgt 85 |||||||||||||||||||| Sbjct: 1688 ccacgggaggcaagatccgt 1669
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 ccttactcgccgccgccgccgcct 316 |||| ||||||||||||||||||| Sbjct: 122878 ccttgctcgccgccgccgccgcct 122855
>ref|XM_954910.1| Neurospora crassa OR74A hypothetical protein (NCU06141.1) partial mRNA Length = 1608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 492 actcgccgccgccgccgcct 511
>ref|XM_958673.1| Neurospora crassa OR74A hypothetical protein (NCU02086.1) partial mRNA Length = 1689 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 288 acgctccttactcgccgccgccgccgcc 315 |||||||| |||||||||||||||||| Sbjct: 1359 acgctcctccctcgccgccgccgccgcc 1386
>ref|XM_325995.1| Neurospora crassa OR74A hypothetical protein (NCU06141.1) partial mRNA Length = 1608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 492 actcgccgccgccgccgcct 511
>ref|XM_608827.2| PREDICTED: Bos taurus similar to Kruppel-like factor 3 (Basic kruppel-like factor) (CACCC-box binding protein BKLF) (TEF-2) (LOC530358), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 703 tactcgccgccgccgccgcc 722
>ref|XM_329275.1| Neurospora crassa OR74A hypothetical protein (NCU02086.1) partial mRNA Length = 1689 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 288 acgctccttactcgccgccgccgccgcc 315 |||||||| |||||||||||||||||| Sbjct: 1359 acgctcctccctcgccgccgccgccgcc 1386
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 2730312 tactcgccgccgccgccgcc 2730293
>ref|XM_860956.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 12 (LOC487605), mRNA Length = 3112 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23 cgccgccgccgccgccttta 42
>ref|XM_860945.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 11 (LOC487605), mRNA Length = 2897 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 3 cgccgccgccgccgccttta 22
>ref|XM_860928.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 10 (LOC487605), mRNA Length = 3067 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23 cgccgccgccgccgccttta 42
>ref|XM_860916.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 9 (LOC487605), mRNA Length = 2593 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23 cgccgccgccgccgccttta 42
>ref|XM_860901.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 8 (LOC487605), mRNA Length = 3007 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23 cgccgccgccgccgccttta 42
>ref|XM_860889.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 7 (LOC487605), mRNA Length = 2944 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23 cgccgccgccgccgccttta 42
>ref|XM_860872.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 6 (LOC487605), mRNA Length = 3107 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 55 cgccgccgccgccgccttta 74
>ref|XM_860860.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 5 (LOC487605), mRNA Length = 3193 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 23 cgccgccgccgccgccttta 42
>ref|XM_860840.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 4 (LOC487605), mRNA Length = 2818 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 50 cgccgccgccgccgccttta 69
>ref|XM_544730.2| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 1 (LOC487605), mRNA Length = 3118 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 50 cgccgccgccgccgccttta 69
>ref|XM_847445.1| PREDICTED: Canis familiaris similar to dipeptidyl peptidase 8 isoform 3, transcript variant 2 (LOC487605), mRNA Length = 3260 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 55 cgccgccgccgccgccttta 74
>gb|AC146607.2| Mus musculus BAC clone RP23-209N19 from chromosome 3, complete sequence Length = 173758 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 151633 actcgccgccgccgccgcct 151652
>ref|XM_570559.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03600) partial mRNA Length = 2617 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 1421 actcgccgccgccgccgcct 1402
>ref|XM_566506.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA01620) partial mRNA Length = 3960 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 1552 tactcgccgccgccgccgcc 1533
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence Length = 186277 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 180130 actcgccgccgccgccgcct 180111
>emb|CR714465.2|CNS0GE8D Tetraodon nigroviridis full-length cDNA Length = 885 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 763 ctcgccgccgccgccgcctt 744
>emb|CR681930.2|CNS0FP4M Tetraodon nigroviridis full-length cDNA Length = 889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 764 ctcgccgccgccgccgcctt 745
>emb|AL162615.13| Human DNA sequence from clone RP5-1041C10 on chromosome 20 Contains the 5' end of the B4GALT5 gene for UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase polypeptide 5, b, the SNRPFP1 gene for small nuclear ribonucleoprotein polypeptide F pseudogene 1, a cytokine-like nuclear factor n-pac (N-PAC) pseudogene, the 5' end of the SLC9A8 gene for solute carrier family 9 (sodium/hydrogen exchanger) isoform 8 and two CpG islands, complete sequence Length = 140092 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 7419 actcgccgccgccgccgcct 7438
>emb|AL161727.15| Human DNA sequence from clone RP11-232A1 on chromosome 9 Contains a ribosomal protein S20 (RPS20) pseudogene and a novel pseudogene, complete sequence Length = 160109 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gtctcctctcctctgtgttt 232 |||||||||||||||||||| Sbjct: 2384 gtctcctctcctctgtgttt 2365
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 135689 cgccgccgccgccgccttta 135670
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 65643 ctcgccgccgccgccgcctt 65662 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tctgccattgatggagatga 410 |||||||||||||||||||| Sbjct: 63539 tctgccattgatggagatga 63520
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 910802 tactcgccgccgccgccgcc 910783
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cgccgccgccgccgcctttagaga 323 |||||||||||||||| ||||||| Sbjct: 15539 cgccgccgccgccgccattagaga 15562
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 143034 actcgccgccgccgccgcct 143015
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 3521 actcgccgccgccgccgcct 3502
>emb|AL627261.10| Zebrafish DNA sequence from clone RP71-1N11 in linkage group 9 Contains three CpG islands, complete sequence Length = 147392 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gccattgatggagatgattg 413 |||||||||||||||||||| Sbjct: 11374 gccattgatggagatgattg 11393
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttt 318 |||||||||||||||||||| Sbjct: 4594 tcgccgccgccgccgccttt 4575
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 2608187 tactcgccgccgccgccgcc 2608206
>dbj|AB218788.1| Prunus mume Pm69 mRNA for Serine carboxypeptidase, complete cds Length = 1755 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gacattcttgaagaagaaac 345 |||||||||||||||||||| Sbjct: 1078 gacattcttgaagaagaaac 1097
>gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 222524 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 70386 tactcgccgccgccgccgcc 70405
>gb|S69375.1|S69373S3 TAL2=bHLH phosphoprotien {oncogene, translocation} [human, T-ALL patient, leukemic cell line SUP-T3, Genomic, 231 nt, segment 3 of 5] Length = 231 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 144 cgccgccgccgccgccttta 125
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 1218445 tactcgccgccgccgccgcc 1218464
>gb|AF322134.1|AF322134 Danthoniopsis dinteri teosinte branched1 protein (tb1) gene, partial cds Length = 1035 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tccttactcgccgccgccgccgcc 315 ||||| |||||||||||||||||| Sbjct: 344 tccttcctcgccgccgccgccgcc 321
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cgccgccgccgccgcctttagaga 323 |||||||||||||||| ||||||| Sbjct: 35390736 cgccgccgccgccgccattagaga 35390759 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 34092139 actcgccgccgccgccgcct 34092120
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 30284060 tactcgccgccgccgccgcc 30284041 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 25991254 ctcgccgccgccgccgcctt 25991235 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 12624845 ctcgccgccgccgccgcctt 12624864
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 28277607 ctcgccgccgccgccgcctt 28277588 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 ccttactcgccgccgccgccgcct 316 |||| ||||||||||||||||||| Sbjct: 27892461 ccttgctcgccgccgccgccgcct 27892438 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 1583867 ctcgccgccgccgccgcctt 1583848
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 8239747 cttactcgccgccgccgccg 8239766
>gb|AF291747.1|AF291747 Gallus gallus zinc-finger transcription factor KROX20 (KROX20) gene, complete cds Length = 3495 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 780 tactcgccgccgccgccgcc 799
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 46572 tactcgccgccgccgccgcc 46553
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tctgccattgatggagatga 410 |||||||||||||||||||| Sbjct: 37511 tctgccattgatggagatga 37530 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 35407 ctcgccgccgccgccgcctt 35388
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 86496 actcgccgccgccgccgcct 86515
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 3007754 ctcgccgccgccgccgcctt 3007735
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 150395 tactcgccgccgccgccgcc 150376
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 30655 tactcgccgccgccgccgcc 30636
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 107158 ctcgccgccgccgccgcctt 107177
>dbj|AB067772.1| Homo sapiens gt-V gene for beta-1.4-galactosyltransferase V, partial cds Length = 2597 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 2159 actcgccgccgccgccgcct 2140
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 29112 ctcgccgccgccgccgcctt 29093
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 146352 ctcgccgccgccgccgcctt 146333
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 71893 cttactcgccgccgccgccg 71912
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 52381 tactcgccgccgccgccgcc 52362
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cgccgccgccgccgcctttagaga 323 ||||||||||||||||||| |||| Sbjct: 33210 cgccgccgccgccgcctttcgaga 33233
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 27844 cttactcgccgccgccgccg 27863
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 106202 cttactcgccgccgccgccg 106221
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 16418 cttactcgccgccgccgccg 16437
>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1756_G07 Length = 149457 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tcgccgccgccgccgccttt 318 |||||||||||||||||||| Sbjct: 87538 tcgccgccgccgccgccttt 87519
>dbj|AK120815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014N07, full insert sequence Length = 3856 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 3524 cttactcgccgccgccgccg 3505
>dbj|AK119897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-C07, full insert sequence Length = 3732 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttactcgccgccgccgccg 313 |||||||||||||||||||| Sbjct: 3482 cttactcgccgccgccgccg 3463
>ref|XM_313952.2| Anopheles gambiae str. PEST ENSANGP00000010027 (ENSANGG00000022783), partial mRNA Length = 636 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 465 cgccgccgccgccgccttta 446
>dbj|AK109872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B02, full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 1007 tactcgccgccgccgccgcc 1026
>dbj|AK106733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H12, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 799 tactcgccgccgccgccgcc 780
>dbj|AK103115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119F15, full insert sequence Length = 2280 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tctgccattgatggagatga 410 |||||||||||||||||||| Sbjct: 998 tctgccattgatggagatga 1017 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 217 ctcgccgccgccgccgcctt 198
>dbj|AK099256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F17, full insert sequence Length = 1660 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 297 cgccgccgccgccgccttta 278
>dbj|AK069927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H23, full insert sequence Length = 1663 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 300 cgccgccgccgccgccttta 281
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier, hypothetical protein, putative NAM protein, putative cis-zeatin O-glucosyltransferases, putative small nuclear ribonucleoprotein, putative cis-zeatin O-glucosyltransferase, putative glutathione peroxidase, putative copper-exporting ATPases, putative serine/threonine dehydratase, and putative actin depolymerizing factor genes, complete cds; and hypothetical protein gene, partial cds Length = 157237 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 cgctccttactcgccgccgccgccgcct 316 |||||| | ||||||||||||||||||| Sbjct: 107486 cgctccctgctcgccgccgccgccgcct 107459
>dbj|AK063523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H12, full insert sequence Length = 1430 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 424 tactcgccgccgccgccgcc 405
>dbj|AK062612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-A10, full insert sequence Length = 1492 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tactcgccgccgccgccgcc 315 |||||||||||||||||||| Sbjct: 589 tactcgccgccgccgccgcc 608
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cgccgccgccgccgcctttagaga 323 |||||||||||||||| ||||||| Sbjct: 22477 cgccgccgccgccgccattagaga 22500
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 actcgccgccgccgccgcct 316 |||||||||||||||||||| Sbjct: 9162 actcgccgccgccgccgcct 9143
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 tccttactcgccgccgccgccgcc 315 |||| ||||||||||||||||||| Sbjct: 111581 tcctcactcgccgccgccgccgcc 111604
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 22351 cgccgccgccgccgccttta 22332
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ctcgccgccgccgccgcctt 317 |||||||||||||||||||| Sbjct: 80068 ctcgccgccgccgccgcctt 80087
>gb|M15052.1|CHKTUB4B Chicken beta-4-tubulin gene, complete cds Length = 3153 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cgccgccgccgccgccttta 319 |||||||||||||||||||| Sbjct: 303 cgccgccgccgccgccttta 284 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,766,432 Number of Sequences: 3902068 Number of extensions: 3766432 Number of successful extensions: 274100 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 258178 Number of HSP's gapped (non-prelim): 15913 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)