ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000249.1| Frankia sp. CcI3, complete genome 46 0.084
2gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.33
3gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.33
4ref|XM_544267.2| PREDICTED: Canis familiaris similar to 6-phosph... 44 0.33
5gb|AF204400.1|AF204400 Myxococcus xanthus FrgA (frgA), FrgB (frg... 44 0.33
6dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.33
7ref|XM_471759.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
8emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
10gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, c... 40 5.2
11gb|AC168273.3| Mus musculus BAC RP23-184H4 (Roswell Park Cancer... 40 5.2
12ref|NM_017472.2| Mus musculus sorting nexin 3 (Snx3), mRNA 40 5.2
13gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosom... 40 5.2
14ref|XM_984930.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.2
15ref|XM_001002602.1| PREDICTED: Mus musculus hypothetical protein... 40 5.2
16gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome... 40 5.2
17gb|AC089983.23| Homo sapiens 12 BAC RP11-818F20 (Roswell Park Ca... 40 5.2
18ref|XM_862048.1| PREDICTED: Canis familiaris similar to BarH-lik... 40 5.2
19ref|XM_848178.1| PREDICTED: Canis familiaris similar to BarH-lik... 40 5.2
20gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 40 5.2
21gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Canc... 40 5.2
22emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.2
23gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop... 40 5.2
24gb|AF520420.1| Mus musculus c222389 pseudogene, complete sequenc... 40 5.2
25tpg|BK000732.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M131,... 40 5.2
26dbj|AK145350.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 5.2
27dbj|AK147386.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 5.2
28dbj|AK154728.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.2
29gb|DQ311370.1| Bombyx mori Lix1 protein mRNA, complete cds 40 5.2
30gb|AC163887.2| Glomus intraradices clone JGIATSX-5E19, complete ... 40 5.2
31dbj|AK172373.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 5.2
32dbj|AK029835.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.2
33gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.2
34gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.2
35dbj|AK046518.1| Mus musculus adult male adrenal gland cDNA, RIKE... 40 5.2
36dbj|AK013183.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 5.2
37dbj|AK054539.1| Mus musculus 2 days pregnant adult female ovary ... 40 5.2
38dbj|AK007798.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 5.2
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
40dbj|AP000033.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.2
41dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
42gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Canc... 40 5.2
43dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
44ref|NM_210388.1| Eremothecium gossypii AER177Wp (AER177W), mRNA 40 5.2
45dbj|AK064137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
46gb|AY106799.1| Zea mays PCO141536 mRNA sequence 40 5.2
47gb|AY105148.1| Zea mays PCO149292 mRNA sequence 40 5.2
48dbj|AP000269.2| Homo sapiens genomic DNA, chromosome 21 clone:CM... 40 5.2
49dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.2
50gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.2
51gb|AF062482.1|AF062482 Mus musculus SDP3 mRNA, complete cds 40 5.2
52ref|NM_145505.2| Mus musculus expressed sequence AI450540 (AI450... 40 5.2
53gb|AF020201.1|AF020201 Homo sapiens Jagged 2 mRNA, complete cds 40 5.2
54gb|M33132.1|HUMP12AA Human proliferating cell nucleolar protein ... 40 5.2
55dbj|AP000179.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.2
56dbj|AP000103.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 5.2 
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 119     ccgccgcccgccgcggccccgcc 141
               |||||||||||||||||||||||
Sbjct: 2768385 ccgccgcccgccgcggccccgcc 2768363
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 120     cgccgcccgccgcggccccgcc 141
               ||||||||||||||||||||||
Sbjct: 1989889 cgccgcccgccgcggccccgcc 1989910



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 111     acgtgccaccgccgcccgccgcggc 135
               ||||||| |||||||||||||||||
Sbjct: 1230035 acgtgccgccgccgcccgccgcggc 1230011



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 123     cgcccgccgcggccccgcctcttc 146
               ||||||||||||||| ||||||||
Sbjct: 1717595 cgcccgccgcggcccggcctcttc 1717618
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 120     cgccgcccgccgcggccccgcc 141
               ||||||||||||||||||||||
Sbjct: 1442354 cgccgcccgccgcggccccgcc 1442333



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 123     cgcccgccgcggccccgcctcttc 146
               ||||||||||||||| ||||||||
Sbjct: 2963078 cgcccgccgcggcccggcctcttc 2963101
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>ref|XM_544267.2| PREDICTED: Canis familiaris similar to
            6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
            (6PF-2-K/Fru-2,6-P2ASE brain-type isozyme) (RB2K)
            (LOC487139), mRNA
          Length = 4352

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 222  acggctgccgcgtagagtccat 243
            ||||||||||||||||||||||
Sbjct: 1313 acggctgccgcgtagagtccat 1334
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>gb|AF204400.1|AF204400 Myxococcus xanthus FrgA (frgA), FrgB (frgB), and FrgC (frgC) genes,
           complete cds
          Length = 6461

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 gccaccgccgcccgccgcggcc 136
           ||||||||||||||||||||||
Sbjct: 605 gccaccgccgcccgccgcggcc 626
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 120     cgccgcccgccgcggccccgcc 141
               ||||||||||||||||||||||
Sbjct: 7462703 cgccgcccgccgcggccccgcc 7462724
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>ref|XM_471759.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 115 gccaccgccgcccgccgcggc 135
           |||||||||||||||||||||
Sbjct: 246 gccaccgccgcccgccgcggc 226
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>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08,
             complete sequence
          Length = 141899

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   gccaccgccgcccgccgcggc 135
             |||||||||||||||||||||
Sbjct: 92349 gccaccgccgcccgccgcggc 92369
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 115      gccaccgccgcccgccgcggc 135
                |||||||||||||||||||||
Sbjct: 14080598 gccaccgccgcccgccgcggc 14080578
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>gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, complete sequence
          Length = 203922

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gccaccgccgcccgccgcgg 134
              ||||||||||||||||||||
Sbjct: 201686 gccaccgccgcccgccgcgg 201667
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>gb|AC168273.3| Mus musculus  BAC RP23-184H4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 202998

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   gccaccgccgcccgccgcgg 134
             ||||||||||||||||||||
Sbjct: 43743 gccaccgccgcccgccgcgg 43762
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>ref|NM_017472.2| Mus musculus sorting nexin 3 (Snx3), mRNA
          Length = 1399

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gccaccgccgcccgccgcgg 134
           ||||||||||||||||||||
Sbjct: 251 gccaccgccgcccgccgcgg 232
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>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence
          Length = 175604

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    gccgcccgccgcggccccgc 140
              ||||||||||||||||||||
Sbjct: 152630 gccgcccgccgcggccccgc 152649
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>ref|XM_984930.1| PREDICTED: Mus musculus hypothetical protein LOC671099 (LOC671099),
           mRNA
          Length = 381

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 147 gccgcccgccgcggccccgc 128
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>ref|XM_001002602.1| PREDICTED: Mus musculus hypothetical protein LOC668608 (LOC668608),
           mRNA
          Length = 381

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 147 gccgcccgccgcggccccgc 128
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>gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome 19, complete sequence
          Length = 202504

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   gccgcccgccgcggccccgc 140
             ||||||||||||||||||||
Sbjct: 23520 gccgcccgccgcggccccgc 23539
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>gb|AC089983.23| Homo sapiens 12 BAC RP11-818F20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 204505

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ccgcccgccgcggccccgcc 141
             ||||||||||||||||||||
Sbjct: 41101 ccgcccgccgcggccccgcc 41120
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>ref|XM_862048.1| PREDICTED: Canis familiaris similar to BarH-like 2, transcript
           variant 2 (LOC611092), mRNA
          Length = 1194

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ccgccgcccgccgcggcccc 138
           ||||||||||||||||||||
Sbjct: 283 ccgccgcccgccgcggcccc 302
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>ref|XM_848178.1| PREDICTED: Canis familiaris similar to BarH-like 2, transcript
           variant 1 (LOC611092), mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ccgccgcccgccgcggcccc 138
           ||||||||||||||||||||
Sbjct: 274 ccgccgcccgccgcggcccc 293
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>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     cccgccgcgatgccgagaag 51
              ||||||||||||||||||||
Sbjct: 189955 cccgccgcgatgccgagaag 189974
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>gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 190580

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ccgcccgccgcggccccgcc 141
             ||||||||||||||||||||
Sbjct: 52861 ccgcccgccgcggccccgcc 52880
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 123     cgcccgccgcggccccgcctcttc 146
               ||||||||||||||| ||||||||
Sbjct: 2693071 cgcccgccgcggcccggcctcttc 2693094
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>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
             biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   caccgccgcccgccgcggcc 136
             ||||||||||||||||||||
Sbjct: 18970 caccgccgcccgccgcggcc 18951
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>gb|AF520420.1| Mus musculus c222389 pseudogene, complete sequence; nuclear receptor 2E1
              (Nr2e1) and sorting nexin 3 (Snx3) genes, complete cds; and
              lactation elevated 1 (Lace1) gene, partial cds
          Length = 187196

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    gccaccgccgcccgccgcgg 134
              ||||||||||||||||||||
Sbjct: 116692 gccaccgccgcccgccgcgg 116711
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>tpg|BK000732.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M131, complete sequence
          Length = 1042

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 ccgcccgccgcggccccgcc 141
           ||||||||||||||||||||
Sbjct: 428 ccgcccgccgcggccccgcc 409
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>dbj|AK145350.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:I0C0020I11 product:sorting nexin 3, full insert
           sequence
          Length = 1180

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gccaccgccgcccgccgcgg 134
           ||||||||||||||||||||
Sbjct: 29  gccaccgccgcccgccgcgg 10
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>dbj|AK147386.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1025O03 product:similar to retinoic acid
           induced 16 [Homo sapiens], full insert sequence
          Length = 5113

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 100 gccgcccgccgcggccccgc 119
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>dbj|AK154728.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630104M20
           product:sorting nexin 3, full insert sequence
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gccaccgccgcccgccgcgg 134
           ||||||||||||||||||||
Sbjct: 29  gccaccgccgcccgccgcgg 10
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>gb|DQ311370.1| Bombyx mori Lix1 protein mRNA, complete cds
          Length = 976

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 cgccgcccgccgcggccccgcctc 143
           |||||||||||||| |||||||||
Sbjct: 227 cgccgcccgccgcgcccccgcctc 204
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>gb|AC163887.2| Glomus intraradices clone JGIATSX-5E19, complete sequence
          Length = 35580

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tcctgcgccggggcgcgccg 164
             ||||||||||||||||||||
Sbjct: 10397 tcctgcgccggggcgcgccg 10416
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>dbj|AK172373.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830204P07 product:Similar to retinoic
           acid induced 16 homolog [Homo sapiens], full insert
           sequence
          Length = 4049

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 84  gccgcccgccgcggccccgc 103
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>dbj|AK029835.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4931407O09 product:hypothetical protein,
           full insert sequence
          Length = 5953

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 449 gccgcccgccgcggccccgc 468
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      ggcccgacggcagccatgtc 88
               ||||||||||||||||||||
Sbjct: 2855799 ggcccgacggcagccatgtc 2855780
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    gtgccaccgccgcccgccgc 132
              ||||||||||||||||||||
Sbjct: 964731 gtgccaccgccgcccgccgc 964712
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>dbj|AK046518.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length
           enriched library, clone:B330003K03 product:KIAA1600
           PROTEIN (FRAGMENT) homolog [Homo sapiens], full insert
           sequence
          Length = 4073

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 111 gccgcccgccgcggccccgc 130
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>dbj|AK013183.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810428J07 product:sorting nexin
           3, full insert sequence
          Length = 1399

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gccaccgccgcccgccgcgg 134
           ||||||||||||||||||||
Sbjct: 251 gccaccgccgcccgccgcgg 232
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>dbj|AK054539.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330039B03
           product:hypothetical ARM repeat structure containing
           protein, full insert sequence
          Length = 1751

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 65  gccgcccgccgcggccccgc 84
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>dbj|AK007798.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810047A09 product:sorting nexin
           3, full insert sequence
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gccaccgccgcccgccgcgg 134
           ||||||||||||||||||||
Sbjct: 37  gccaccgccgcccgccgcgg 18
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 122      ccgcccgccgcggccccgcc 141
                ||||||||||||||||||||
Sbjct: 30859589 ccgcccgccgcggccccgcc 30859570



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                           
Query: 33      ccgccgcgatgccgagaaggtggcaggtctggggccggcccgacggcagccatgtctgga 92
               |||||| ||||| ||| ||||||||||| |||||   ||||||||| ||||  |||||| 
Sbjct: 3353991 ccgccgggatgcagaggaggtggcaggtgtgggggaagcccgacgggagcctcgtctggg 3353932

                       
Query: 93      tccccgcc 100
               | ||||||
Sbjct: 3353931 tacccgcc 3353924
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>dbj|AP000033.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 4/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gccccgcctcttcctgcgcc 153
             ||||||||||||||||||||
Sbjct: 16092 gccccgcctcttcctgcgcc 16111
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>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0638D12
          Length = 161277

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ccgcccgccgcggccccgcc 141
             ||||||||||||||||||||
Sbjct: 59956 ccgcccgccgcggccccgcc 59937
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>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 172571

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    cgcggccccgcctcttcctg 149
              ||||||||||||||||||||
Sbjct: 125411 cgcggccccgcctcttcctg 125430
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0701D05
          Length = 172161

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 33    ccgccgcgatgccgagaaggtggcaggtctggggccggcccgacggcagccatgtctgga 92
             |||||| ||||| ||| ||||||||||| |||||   ||||||||| ||||  |||||| 
Sbjct: 32361 ccgccgggatgcagaggaggtggcaggtgtgggggaagcccgacgggagcctcgtctggg 32302

                     
Query: 93    tccccgcc 100
             | ||||||
Sbjct: 32301 tacccgcc 32294
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>ref|NM_210388.1| Eremothecium gossypii AER177Wp (AER177W), mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 gtgccaccgccgcccgccgc 132
           ||||||||||||||||||||
Sbjct: 117 gtgccaccgccgcccgccgc 98
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>dbj|AK064137.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-G12, full
           insert sequence
          Length = 1530

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 33  ccgccgcgatgccgagaaggtggcaggtctggggccggcccgacggcagccatgtctgga 92
           |||||| ||||| ||| ||||||||||| |||||   ||||||||| ||||  |||||| 
Sbjct: 78  ccgccgggatgcagaggaggtggcaggtgtgggggaagcccgacgggagcctcgtctggg 137

                   
Query: 93  tccccgcc 100
           | ||||||
Sbjct: 138 tacccgcc 145
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>gb|AY106799.1| Zea mays PCO141536 mRNA sequence
          Length = 1013

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 cggagcaaccggcgacgcag 317
           ||||||||||||||||||||
Sbjct: 142 cggagcaaccggcgacgcag 161
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>gb|AY105148.1| Zea mays PCO149292 mRNA sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  ccccgccccggaccccgacg 113
           ||||||||||||||||||||
Sbjct: 148 ccccgccccggaccccgacg 129
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>dbj|AP000269.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-T293, complete
            sequence
          Length = 71452

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  gccccgcctcttcctgcgcc 153
            ||||||||||||||||||||
Sbjct: 4562 gccccgcctcttcctgcgcc 4543
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>dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, section 58/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gccccgcctcttcctgcgcc 153
             ||||||||||||||||||||
Sbjct: 18968 gccccgcctcttcctgcgcc 18949
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     cgcccgccgcggccccgcct 142
               ||||||||||||||||||||
Sbjct: 1066193 cgcccgccgcggccccgcct 1066174
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>gb|AF062482.1|AF062482 Mus musculus SDP3 mRNA, complete cds
          Length = 775

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gccaccgccgcccgccgcgg 134
           ||||||||||||||||||||
Sbjct: 24  gccaccgccgcccgccgcgg 5
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>ref|NM_145505.2| Mus musculus expressed sequence AI450540 (AI450540), mRNA
          Length = 5953

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gccgcccgccgcggccccgc 140
           ||||||||||||||||||||
Sbjct: 449 gccgcccgccgcggccccgc 468
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>gb|AF020201.1|AF020201 Homo sapiens Jagged 2 mRNA, complete cds
          Length = 4749

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 ccgcccgccgcggccccgcc 141
           ||||||||||||||||||||
Sbjct: 39  ccgcccgccgcggccccgcc 20
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>gb|M33132.1|HUMP12AA Human proliferating cell nucleolar protein P120 gene, exons 1-15
          Length = 14254

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  cgcggccccgcctcttcctg 149
            ||||||||||||||||||||
Sbjct: 2393 cgcggccccgcctcttcctg 2374
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>dbj|AP000179.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 6/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gccccgcctcttcctgcgcc 153
             ||||||||||||||||||||
Sbjct: 20807 gccccgcctcttcctgcgcc 20788
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>dbj|AP000103.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 6/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gccccgcctcttcctgcgcc 153
             ||||||||||||||||||||
Sbjct: 20807 gccccgcctcttcctgcgcc 20788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,260,580
Number of Sequences: 3902068
Number of extensions: 2260580
Number of successful extensions: 52713
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51499
Number of HSP's gapped (non-prelim): 1214
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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