>DRL27_ARATH (Q9T048) Putative disease resistance protein At4g27190|
          Length = 985

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
 Frame = +1

Query: 106 CRGVKGELMFNVKGLEADTAFELFKK----VSKKSEVAELQELTSL-CGGLPKVIVEVAA 270
           CR +K +L   V  L  + A+ELF K    V +   V ++ +  S  CGGLP  I+ V  
Sbjct: 288 CRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGT 347

Query: 271 VF--AKNTDRWKHTLSTKNK 324
                KN   W H LS  +K
Sbjct: 348 AMRGKKNVKLWNHVLSKLSK 367

>RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance to Pseudomonas|
           syringae protein 2)
          Length = 909

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
 Frame = +1

Query: 10  EEWDLIKANLVSGSHRQNVIIAVTIEQEMASHCRGVKGELMFNVKGLEADTAFELF---- 177
           EE DL K   V    R+N    +   + +A  C  +  E    V+ LE   A+ELF    
Sbjct: 266 EEIDLEKTG-VPRPDRENKCKVMFTTRSIAL-CNNMGAEYKLRVEFLEKKHAWELFCSKV 323

Query: 178 --KKVSKKSEVAELQEL-TSLCGGLPKVIVEVAAVFA--KNTDRWKHTLSTKNKFMLELE 342
             K + + S +  L E+  S CGGLP  ++ +    A  +  + W H      +F  E++
Sbjct: 324 WRKDLLESSSIRRLAEIIVSKCGGLPLALITLGGAMAHRETEEEWIHASEVLTRFPAEMK 383

>CKI3_SCHPO (O74135) Casein kinase I homolog 3 (EC 2.7.11.1)|
          Length = 439

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = +1

Query: 142 KGLEADTAFELFKKVSKKSEVAELQELTSLCGGLPKVIVEVAAVFAKN 285
           +GL+A T  + ++K+ +K +V  L+EL   C G PK  ++   ++A+N
Sbjct: 222 QGLKAATNKQKYEKIGEKKQVTPLKEL---CEGYPKEFLQY-MIYARN 265

>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3|
          Length = 847

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
 Frame = +1

Query: 10  EEWDLIKANLVSGSHRQNVIIAVTIEQEMASHCRG-VKGELMFNVKGLEADTAFE--LFK 180
           + W+ +K  L    HR + +I  T  + +A    G V    +  +   E+ T FE   F 
Sbjct: 284 DAWESLKRALPC-DHRGSKVIITTRIRAIAEGVEGTVYAHKLRFLTFEESWTLFERKAFS 342

Query: 181 KVSKKSEVAEL--QELTSLCGGLPKVIVEVAAVFA-KNTDRW 297
            + K  E  +   +E+   CGGLP  IV ++ + + K T+ W
Sbjct: 343 NIEKVDEDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKRTNEW 384

>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1261

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = +1

Query: 67  IIAVTIEQEMASHCRGVKGELMFNVKGLEADTAFELFK-----KVSKKSEVAELQELTSL 231
           ++  T  + +     GV+ E+     GL+ + A E+       K+ K  E A  + + S 
Sbjct: 262 VLLTTRNRALTDSVSGVRYEVPVE-NGLDEEKALEILALYVNGKMHKLPEQA--RSIVSE 318

Query: 232 CGGLPKVIVEVAAVFAKNTDRWKHTL 309
           C G P V+  + A+  +  DRW + L
Sbjct: 319 CKGSPLVVSLIGALLREFPDRWSYYL 344

>TENI_BACSU (P25053) Regulatory protein tenI|
          Length = 205

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 134 LMSKVWKLTQPLNSSRRYPRRVKSQSYKNLL 226
           +MS ++   +PL ++RRY R++K   Y+  L
Sbjct: 175 VMSGIFSSAEPLEAARRYSRKLKEMRYEKAL 205

>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 22/76 (28%), Positives = 36/76 (47%)
 Frame = -2

Query: 338 SSSMNLFLVXRVCFHRSVFLANTAATSTITFGXXXXXXXXXXXSATSLFLDTFLKSSKAV 159
           SSS+   LV    F  S  ++++  TST  F            S+TS   ++  K+S A 
Sbjct: 674 SSSVTSSLVTSSSFISSSVISSSTTTSTSIFSESSTSSVIPTSSSTSGSSES--KTSSAS 731

Query: 158 SASKPLTLNMSSPLTP 111
           S+S   +++  SP +P
Sbjct: 732 SSSSSSSISSESPKSP 747

>DRL14_ARATH (Q9SI85) Probable disease resistance protein At1g62630 (pNd4)|
          Length = 893

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
 Frame = +1

Query: 16  WDLIK-ANLVSGSHRQNVIIAVTIEQEMASHCRGVKGELMFNVKGLEADTAFELF-KKVS 189
           WD ++ AN+     R      +       + C  +  E    V+ LE + AF+LF KKV 
Sbjct: 264 WDKVELANIGVPDPRTQKGCKLAFTSRSLNVCTSMGDEEPMEVQCLEENVAFDLFQKKVG 323

Query: 190 KKS-----EVAELQELTS-LCGGLPKVIVEVAAVFA--KNTDRWKHTLSTKNKFMLE 336
           +K+      + +L  + +  C GLP  +  +    +  +    W++ +   N +  E
Sbjct: 324 QKTLGSDPGIPQLARIVAKKCCGLPLALNVIGETMSCKRTIQEWRNAIHVLNSYAAE 380

>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2|
          Length = 1271

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
 Frame = +1

Query: 10  EEWDLIKANLVSGSHRQNVIIAVTIEQE-MASHCRGVKGELMFNVKGLEADTAFELFKK- 183
           E+WD IKA      H++   + +T   E +  H         F  + L  + +++LF++ 
Sbjct: 277 EDWDRIKAVF---PHKRGWKMLLTSRNEGLGLHADPTC--FAFRPRILTPEQSWKLFERI 331

Query: 184 VSKKSEVAELQ-------ELTSLCGGLPKVIVEVAAVFAKNTDRWKHTL 309
           VS + +  E +       E+ + CGGLP  +  +  + AK     KHT+
Sbjct: 332 VSSRRDKTEFKVDEAMGKEMVTYCGGLPLAVKVLGGLLAK-----KHTV 375

>APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1249

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +1

Query: 142 KGLEADTAFELFKKVSKKSEVAELQELTSLCGGLPKVIVEVAAVFAKNTDRWKHTL 309
           KGLE      LF  + K+   AE   +   C G P V+  + A+     +RW + L
Sbjct: 290 KGLEI---LSLFVNMKKEDLPAEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYL 342

>DDPS2_ARATH (Q56Y11) Dehydrodolichyl diphosphate synthase 2 (EC 2.5.1.-)|
           (Dedol-PP synthase 2)
          Length = 310

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 193 KSEVAELQELTSLCGGLPKVIVEVAAVFAKNTDRW 297
           ++ V  L+E+  LCG   K  ++V  VFA +TD W
Sbjct: 104 RAGVEALKEIVELCG---KWGIQVLTVFAFSTDNW 135

>RP8L3_ARATH (Q9FJB5) Probable disease resistance RPP8-like protein 3|
          Length = 901

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
 Frame = +1

Query: 127 LMFNVKGLEADTAFELFKKVSKKSEVAELQELTSL-------CGGLPKVIVEVAAVFAKN 285
           L F  + L    +++LF+++  +    E +E+ ++       CGGLP  +  +  + A  
Sbjct: 312 LSFRARILNPKESWKLFERIVPRRNETEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLAN- 370

Query: 286 TDRWKHTLS 312
               KHT S
Sbjct: 371 ----KHTAS 375

>NUDT5_MOUSE (Q9JKX6) ADP-sugar pyrophosphatase (EC 3.6.1.13) (EC 3.6.1.-)|
           (Nucleoside diphosphate-linked moiety X motif 5) (Nudix
           motif 5)
          Length = 218

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 20/80 (25%), Positives = 29/80 (36%)
 Frame = +1

Query: 52  HRQNVIIAVTIEQEMASHCRGVKGELMFNVKGLEADTAFELFKKVSKKSEVAELQELTSL 231
           H + VI+       M S+C       + + +  EA    EL ++   K EVAE      +
Sbjct: 72  HHECVILVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCM 131

Query: 232 CGGLPKVIVEVAAVFAKNTD 291
             GL      V  V     D
Sbjct: 132 DPGLSNCTTHVVTVTINGDD 151

>GRHL1_XENLA (Q5EY87) Grainyhead-like protein 1 homolog (Transcription factor|
           CP2-like 2)
          Length = 609

 Score = 23.1 bits (48), Expect(2) = 9.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 64  VIIAVTIEQEMASHCRGVKGELMFNVKGLEADTAFE 171
           V IA  I+ E  SHC  V  + +F+ +  E   AF+
Sbjct: 143 VSIAHPIKTESQSHCFSVGLQSVFHTEPTERIVAFD 178



 Score = 22.7 bits (47), Expect(2) = 9.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 161 QPLNSSRRYPRRVKSQSYK 217
           QP NS RR P    S++YK
Sbjct: 191 QPPNSQRRTPDSTFSETYK 209

>NU5M_ACACA (Q37372) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 675

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = -1

Query: 198 TLLGYLLEEFKGCVSFQTFDIKHELSLNSTAMRGHFLFNCNSDDNILTMRP*HQVSFYEI 19
           +L+G L   F G V    +DIK  ++ ++ +  G+  F C   +  + +       F++ 
Sbjct: 288 SLIGGLTALFAGTVGLVQYDIKKVIAYSTCSQLGYMFFACGMSNYSVGLFHLFNHGFFKA 347

Query: 18  PFFCG 4
             F G
Sbjct: 348 LLFLG 352

>NANA_HAEIN (P44539) N-acetylneuraminate lyase (EC 4.1.3.3) (N-acetylneuraminic|
           acid aldolase) (N-acetylneuraminate pyruvate-lyase)
           (Sialic acid lyase) (Sialate lyase) (Sialic acid
           aldolase)
          Length = 293

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 112 GVKGEL--MFNVKGLEADTAFELFKKVSKKSEVAELQELTS 228
           GV G +   FNV G+ A   FEL  K  K +E  E+Q +T+
Sbjct: 200 GVDGAIGSTFNVNGVRARQIFEL-TKAGKLAEALEIQHVTN 239

>CISY_PYRFU (Q53554) Citrate synthase (EC 2.3.3.1)|
          Length = 376

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
 Frame = +1

Query: 76  VTIEQEMASHCRGVKGELMFNVKGLEADTAFELFK---------KVSKKSEVAELQELTS 228
           V I+Q    +  G +G+L +    +E       F+         K+   SE+   ++  +
Sbjct: 13  VYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELA 72

Query: 229 LCGGLPKVIVEVAAVFAKNT 288
              GLPK ++E+     KNT
Sbjct: 73  KSRGLPKEVIEIMEALPKNT 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,535,086
Number of Sequences: 219361
Number of extensions: 744829
Number of successful extensions: 1908
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)