>gb|AC153977.4| Mus musculus 10 BAC RP24-270K22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 163035

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    gaagaatgggatctcataaaa 30
             |||||||||||||||||||||
Sbjct: 92564 gaagaatgggatctcataaaa 92584

>gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, complete sequence
          Length = 227078

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 119  agggagagctcatgtttaatg 139
            |||||||||||||||||||||
Sbjct: 2451 agggagagctcatgtttaatg 2471

>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163461

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    agggagagctcatgtttaatg 139
              |||||||||||||||||||||
Sbjct: 111091 agggagagctcatgtttaatg 111111

>gb|AC024941.30|AC024941 Homo sapiens 12 BAC RP11-900F13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172246

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 7     acagaagaatgggatctcataaaag 31
             |||||||||||| ||||||||||||
Sbjct: 81771 acagaagaatggtatctcataaaag 81795

>dbj|BS000051.1| Pan troglodytes chromosome 22 clone:RP43-089B14, map 22, complete
             sequences
          Length = 165502

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tccacagaagaatgggatctc 24
             |||||||||||||||||||||
Sbjct: 57524 tccacagaagaatgggatctc 57504

>dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, section 19/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      tccacagaagaatgggatctc 24
              |||||||||||||||||||||
Sbjct: 333728 tccacagaagaatgggatctc 333708

>dbj|AP000958.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B794P4,
             LL56-APP region, complete sequence
          Length = 50974

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tccacagaagaatgggatctc 24
             |||||||||||||||||||||
Sbjct: 26083 tccacagaagaatgggatctc 26063

>ref|XM_585106.2| PREDICTED: Bos taurus similar to MEGF10 protein (LOC539136), mRNA
          Length = 4467

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  gttgaggtagccgccgtgtt 275
            ||||||||||||||||||||
Sbjct: 4023 gttgaggtagccgccgtgtt 4004

>gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0026G02, complete sequence
          Length = 123472

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     cagtccacagaagaatggga 20
             ||||||||||||||||||||
Sbjct: 95967 cagtccacagaagaatggga 95948



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 232   tgtggtggacttccgaaagttatagttg 259
             |||||||||||||| ||||| |||||||
Sbjct: 93123 tgtggtggacttcctaaagtaatagttg 93096



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     cagtccacagaagaatggga 20
             ||||||||||||||||||||
Sbjct: 76184 cagtccacagaagaatggga 76165



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 232   tgtggtggacttccgaaagttatagttg 259
             |||||||||||||| ||||| |||||||
Sbjct: 73340 tgtggtggacttcctaaagtaatagttg 73313

>ref|NM_019413.1| Mus musculus roundabout homolog 1 (Drosophila) (Robo1), mRNA
          Length = 6856

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 agagtgaagtcgcagagcta 213
           ||||||||||||||||||||
Sbjct: 885 agagtgaagtcgcagagcta 904

>gb|AC129320.5| Mus musculus BAC clone RP24-133J7 from chromosome 16, complete sequence
          Length = 183323

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    agagtgaagtcgcagagcta 213
              ||||||||||||||||||||
Sbjct: 183252 agagtgaagtcgcagagcta 183233

>gb|AC116999.2| Mus musculus BAC clone RP23-28L10 from 19, complete sequence
          Length = 209671

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   aaaaataagttcatgctaga 335
             ||||||||||||||||||||
Sbjct: 35442 aaaaataagttcatgctaga 35423

>gb|AC164551.2| Mus musculus BAC clone RP23-365G9 from chromosome 16, complete sequence
          Length = 215805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   agagtgaagtcgcagagcta 213
             ||||||||||||||||||||
Sbjct: 55373 agagtgaagtcgcagagcta 55392

>emb|AL592293.7| Human DNA sequence from clone RP11-54D18 on chromosome 9 Contains a
             lactate dehdrogenase A (LDHA) (LOC158222) pseudogene, a
             novel pseudogene (FLJ20543), a pseudogene similar to part
             of chloride channel 3 (CLCN3) (CLC3), a pseudogene similar
             to part of PC4 and SFRS1 interacting protein 2 (PSIP2) and
             a CpG island, complete sequence
          Length = 157574

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   taatgtcaaaggtttggaag 154
             ||||||||||||||||||||
Sbjct: 96209 taatgtcaaaggtttggaag 96190

>emb|Y17793.1|MMU17793 Mus musculus mRNA for Dutt1 protein
          Length = 6922

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 agagtgaagtcgcagagcta 213
           ||||||||||||||||||||
Sbjct: 885 agagtgaagtcgcagagcta 904

>gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-72621, Complete
             Sequence, complete sequence
          Length = 256933

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 171   actcttcaagaaggtatccaagaa 194
             |||||||||||||| |||||||||
Sbjct: 81667 actcttcaagaaggcatccaagaa 81690

>dbj|AK142047.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230012M05 product:roundabout homolog 1
            (Drosophila), full insert sequence
          Length = 3837

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  agagtgaagtcgcagagcta 213
            ||||||||||||||||||||
Sbjct: 1569 agagtgaagtcgcagagcta 1588

>dbj|AK138485.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330036L20 product:Transmembrane receptor
            Robo1 homolog [Rattus norvegicus], full insert sequence
          Length = 1869

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  agagtgaagtcgcagagcta 213
            ||||||||||||||||||||
Sbjct: 1623 agagtgaagtcgcagagcta 1642

>gb|AC111220.6| Rattus norvegicus Chr BAC CH230-122K11 (Children's Hospital Oakland
              Research Institute Rat (BN/SsNHsd/MCW) BAC library)
              complete sequence
          Length = 237466

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     aagaatgggatctcataaaa 30
              ||||||||||||||||||||
Sbjct: 141565 aagaatgggatctcataaaa 141546

>gb|AC109037.6| Rattus norvegicus 18 BAC CH230-178G23 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 208650

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     aagaatgggatctcataaaa 30
              ||||||||||||||||||||
Sbjct: 204451 aagaatgggatctcataaaa 204470

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        cagtccacagaagaatggga 20
                ||||||||||||||||||||
Sbjct: 22735167 cagtccacagaagaatggga 22735148



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 232      tgtggtggacttccgaaagttatagttg 259
                |||||||||||||| ||||| |||||||
Sbjct: 22732323 tgtggtggacttcctaaagtaatagttg 22732296



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        cagtccacagaagaatggga 20
                ||||||||||||||||||||
Sbjct: 22715384 cagtccacagaagaatggga 22715365



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 232      tgtggtggacttccgaaagttatagttg 259
                |||||||||||||| ||||| |||||||
Sbjct: 22712540 tgtggtggacttcctaaagtaatagttg 22712513

>gb|AC004664.1|AC004664 Homo sapiens chromosome 4 clone C0500H20 map 4p16, complete sequence
          Length = 172072

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    gtggagttaagggagagctc 129
              ||||||||||||||||||||
Sbjct: 135117 gtggagttaagggagagctc 135098

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        cagtccacagaagaatggga 20
                ||||||||||||||||||||
Sbjct: 23045078 cagtccacagaagaatggga 23045059



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 232      tgtggtggacttccgaaagttatagttg 259
                |||||||||||||| ||||| |||||||
Sbjct: 23042234 tgtggtggacttcctaaagtaatagttg 23042207



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        cagtccacagaagaatggga 20
                ||||||||||||||||||||
Sbjct: 23025295 cagtccacagaagaatggga 23025276



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 232      tgtggtggacttccgaaagttatagttg 259
                |||||||||||||| ||||| |||||||
Sbjct: 23022451 tgtggtggacttcctaaagtaatagttg 23022424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,925,184
Number of Sequences: 3902068
Number of extensions: 2925184
Number of successful extensions: 50190
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50119
Number of HSP's gapped (non-prelim): 71
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)