ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468230.1| Oryza sativa (japonica cultivar-group), mRNA 293 2e-76
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 293 2e-76
3dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic D... 293 2e-76
4dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 293 2e-76
5dbj|AK121357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 2e-76
6gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 270 3e-69
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 270 3e-69
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 270 3e-69
9gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome... 44 0.29
10emb|AL645962.22| Mouse DNA sequence from clone RP23-217L7 on chr... 44 0.29
11gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Canc... 44 0.29
12gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complet... 44 0.29
13gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, com... 42 1.1
14gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome... 42 1.1
15gb|AC165955.3| Mus musculus BAC clone RP23-458A8 from chromosome... 42 1.1
16gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosom... 42 1.1
17gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosom... 42 1.1
18gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosom... 42 1.1
19gb|AC018515.7| Homo sapiens chromosome , clone RP11-250G15, comp... 42 1.1
20gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Can... 42 1.1
21gb|AC122024.6| Mus musculus BAC clone RP24-378K7 from chromosome... 42 1.1
22gb|AF123438.1|AF123438 Haloarcula hispanica 3-hydroxy-3-methylgl... 42 1.1
23gb|AC022309.16|AC022309 Homo sapiens chromosome 15 clone RP11-67... 42 1.1
24gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Can... 42 1.1
25gb|U88832.1|HSGROUCH2 Human groucho protein homolog (AES) gene, ... 42 1.1
26gb|AC005944.1|AC005944 Homo sapiens chromosome 19, cosmid F23613... 42 1.1
27emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on ch... 42 1.1
28gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome... 40 4.5
29ref|NM_111044.2| Arabidopsis thaliana unknown protein AT3G01780 ... 40 4.5
30ref|XM_468544.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
31ref|NM_001030669.1| Gallus gallus RAB35, member RAS oncogene fam... 40 4.5
32gb|AF182035.1| Homo sapiens skeletal muscle alpha-actin gene (AC... 40 4.5
33gb|AC122774.11| Mus musculus chromosome 15, clone RP24-189C9, co... 40 4.5
34ref|XM_584006.2| PREDICTED: Bos taurus similar to Musculin (Acti... 40 4.5
35gb|AE009196.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 4.5
36gb|AC138792.2| Mus musculus BAC clone RP23-235I2 from chromosome... 40 4.5
37gb|AC165361.3| Mus musculus BAC clone RP23-77H6 from chromosome ... 40 4.5
38emb|CT009710.8| Mouse DNA sequence from clone RP23-131M7 on chro... 40 4.5
39ref|XM_568750.1| Cryptococcus neoformans var. neoformans JEC21 W... 40 4.5
40gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosom... 40 4.5
41gb|AC122241.4| Mus musculus BAC clone RP23-146M20 from chromosom... 40 4.5
42gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC... 40 4.5
43gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC... 40 4.5
44gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome... 40 4.5
45emb|AL353685.23| Human DNA sequence from clone RP11-31J20 on chr... 40 4.5
46emb|AL160004.18| Human DNA sequence from clone RP5-1068B5 on chr... 40 4.5
47emb|AL133510.13| Human DNA sequence from clone RP3-481C9 on chro... 40 4.5
48gb|AY177248.1| Oryctolagus cuniculus whey acidic protein (WAP) g... 40 4.5
49gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, c... 40 4.5
50emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chr... 40 4.5
51emb|AJ851375.1| Gallus gallus mRNA for hypothetical protein, clo... 40 4.5
52emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chr... 40 4.5
53emb|AL833227.1|HSM804538 Homo sapiens genomic DNA; cDNA DKFZp667... 40 4.5
54gb|AC154716.3| Mus musculus BAC clone RP24-362G2 from chromosome... 40 4.5
55gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 4.5
56emb|CR599788.1| full-length cDNA clone CS0DC013YA17 of Neuroblas... 40 4.5
57gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 4.5
58gb|AF287262.1|AF287262 Homo sapiens ATP-binding cassette 1 sub-f... 40 4.5
59dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
60gb|BT004227.1| Arabidopsis thaliana clone RAFL16-01-H05 (R20885)... 40 4.5
61gb|AC009301.3| Homo sapiens BAC clone RP11-62F14 from 2, complet... 40 4.5
62gb|AF275948.1|AF275948 Homo sapiens ABCA1 (ABCA1) gene, complete... 40 4.5
63gb|AC112643.12| Homo sapiens 3 BAC RP11-328G15 (Roswell Park Can... 40 4.5
64dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
65dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
66dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
67gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer... 40 4.5
68dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
69dbj|AK106522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
70dbj|AK105369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
71dbj|AK101449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
72gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, comple... 40 4.5
73gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 40 4.5
74emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chro... 40 4.5
75gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, co... 40 4.5
76gb|AC129321.5| Mus musculus BAC clone RP24-160I20 from 8, comple... 40 4.5
77gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complet... 40 4.5
78emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chro... 40 4.5
79dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.5
80emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on ch... 40 4.5
81gb|M20543.1|HUMSAACT Human skeletal alpha-actin gene, complete cds 40 4.5 
>ref|XM_468230.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3771

 Score =  293 bits (148), Expect = 2e-76
 Identities = 289/336 (86%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcacgcc 63
           ||||||||||| || ||||| || ||||| |||||  ||||||||||||| || ||||||
Sbjct: 381 gcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgcc 440

                                                                       
Query: 64  gacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacctcc 123
           |||||||| ||||||||||| ||| |||||||||||||||| || |||||||||||||| 
Sbjct: 441 gacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcg 500

                                                                       
Query: 124 ctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcgctc 183
            | ||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct: 501 ttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctc 560

                                                                       
Query: 184 atggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgcagac 243
           ||||||||||| || || |||||||| || ||| | || || || |||||| |||| || 
Sbjct: 561 atggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggat 620

                                                                       
Query: 244 gcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcgcgg 303
           || ||||| ||| |||| || ||||| ||||||||||| |||||||||||||| || |||
Sbjct: 621 gctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccgg 680

                                               
Query: 304 cgtatgagccggcttgctggggacaagctcgttgat 339
           || |||||||||||||| ||||||||||| ||||||
Sbjct: 681 cggatgagccggcttgccggggacaagcttgttgat 716
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  293 bits (148), Expect = 2e-76
 Identities = 289/336 (86%)
 Strand = Plus / Plus

                                                                            
Query: 4        gcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcacgcc 63
                ||||||||||| || ||||| || ||||| |||||  ||||||||||||| || ||||||
Sbjct: 33719285 gcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgcc 33719344

                                                                            
Query: 64       gacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacctcc 123
                |||||||| ||||||||||| ||| |||||||||||||||| || |||||||||||||| 
Sbjct: 33719345 gacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcg 33719404

                                                                            
Query: 124      ctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcgctc 183
                 | ||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct: 33719405 ttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctc 33719464

                                                                            
Query: 184      atggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgcagac 243
                ||||||||||| || || |||||||| || ||| | || || || |||||| |||| || 
Sbjct: 33719465 atggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggat 33719524

                                                                            
Query: 244      gcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcgcgg 303
                || ||||| ||| |||| || ||||| ||||||||||| |||||||||||||| || |||
Sbjct: 33719525 gctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccgg 33719584

                                                    
Query: 304      cgtatgagccggcttgctggggacaagctcgttgat 339
                || |||||||||||||| ||||||||||| ||||||
Sbjct: 33719585 cggatgagccggcttgccggggacaagcttgttgat 33719620



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      cctccctctcctccctcctc 138
                ||||||||||||||||||||
Sbjct: 35769371 cctccctctcctccctcctc 35769352



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      gctcatgtgctccaccaacc 175
                ||||||||||||||||||||
Sbjct: 32180905 gctcatgtgctccaccaacc 32180886
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>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1249_F12
          Length = 133205

 Score =  293 bits (148), Expect = 2e-76
 Identities = 289/336 (86%)
 Strand = Plus / Plus

                                                                         
Query: 4     gcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcacgcc 63
             ||||||||||| || ||||| || ||||| |||||  ||||||||||||| || ||||||
Sbjct: 87692 gcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgcc 87751

                                                                         
Query: 64    gacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacctcc 123
             |||||||| ||||||||||| ||| |||||||||||||||| || |||||||||||||| 
Sbjct: 87752 gacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcg 87811

                                                                         
Query: 124   ctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcgctc 183
              | ||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct: 87812 ttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctc 87871

                                                                         
Query: 184   atggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgcagac 243
             ||||||||||| || || |||||||| || ||| | || || || |||||| |||| || 
Sbjct: 87872 atggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggat 87931

                                                                         
Query: 244   gcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcgcgg 303
             || ||||| ||| |||| || ||||| ||||||||||| |||||||||||||| || |||
Sbjct: 87932 gctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccgg 87991

                                                 
Query: 304   cgtatgagccggcttgctggggacaagctcgttgat 339
             || |||||||||||||| ||||||||||| ||||||
Sbjct: 87992 cggatgagccggcttgccggggacaagcttgttgat 88027
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0700F06
          Length = 139277

 Score =  293 bits (148), Expect = 2e-76
 Identities = 289/336 (86%)
 Strand = Plus / Plus

                                                                         
Query: 4     gcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcacgcc 63
             ||||||||||| || ||||| || ||||| |||||  ||||||||||||| || ||||||
Sbjct: 50152 gcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgcc 50211

                                                                         
Query: 64    gacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacctcc 123
             |||||||| ||||||||||| ||| |||||||||||||||| || |||||||||||||| 
Sbjct: 50212 gacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcg 50271

                                                                         
Query: 124   ctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcgctc 183
              | ||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct: 50272 ttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctc 50331

                                                                         
Query: 184   atggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgcagac 243
             ||||||||||| || || |||||||| || ||| | || || || |||||| |||| || 
Sbjct: 50332 atggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggat 50391

                                                                         
Query: 244   gcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcgcgg 303
             || ||||| ||| |||| || ||||| ||||||||||| |||||||||||||| || |||
Sbjct: 50392 gctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccgg 50451

                                                 
Query: 304   cgtatgagccggcttgctggggacaagctcgttgat 339
             || |||||||||||||| ||||||||||| ||||||
Sbjct: 50452 cggatgagccggcttgccggggacaagcttgttgat 50487
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>dbj|AK121357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123B03, full
           insert sequence
          Length = 3770

 Score =  293 bits (148), Expect = 2e-76
 Identities = 289/336 (86%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcacgcc 63
           ||||||||||| || ||||| || ||||| |||||  ||||||||||||| || ||||||
Sbjct: 380 gcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgcc 439

                                                                       
Query: 64  gacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacctcc 123
           |||||||| ||||||||||| ||| |||||||||||||||| || |||||||||||||| 
Sbjct: 440 gacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcg 499

                                                                       
Query: 124 ctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcgctc 183
            | ||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct: 500 ttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctc 559

                                                                       
Query: 184 atggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgcagac 243
           ||||||||||| || || |||||||| || ||| | || || || |||||| |||| || 
Sbjct: 560 atggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggat 619

                                                                       
Query: 244 gcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcgcgg 303
           || ||||| ||| |||| || ||||| ||||||||||| |||||||||||||| || |||
Sbjct: 620 gctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccgg 679

                                               
Query: 304 cgtatgagccggcttgctggggacaagctcgttgat 339
           || |||||||||||||| ||||||||||| ||||||
Sbjct: 680 cggatgagccggcttgccggggacaagcttgttgat 715
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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09
              map S1559, complete sequence
          Length = 190721

 Score =  270 bits (136), Expect = 3e-69
 Identities = 283/332 (85%)
 Strand = Plus / Minus

                                                                          
Query: 1      atcgcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcac 60
              |||||||||||||| || ||||| || ||||| |||||  | |||||||||||||| |||
Sbjct: 136825 atcgcctcgttcccctcgctcccttcccacctcctcccgtcgctcctctcctcggcccac 136766

                                                                          
Query: 61     gccgacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacc 120
              ||||||||||| ||||| |||||||| ||||||||||| |||||||| || || || |||
Sbjct: 136765 gccgacatcgccgccgcgctctcctcccccgccgagtcgctccgcctcgcggcggtgacc 136706

                                                                          
Query: 121    tccctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcg 180
              || |||||||| ||||||||||| || ||||| ||||||||||||||| ||||||| |||
Sbjct: 136705 tcgctctcctcgctcctcccgcgggacgacctcgcgctcatgtgctcctccaacccgtcg 136646

                                                                          
Query: 181    ctcatggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgca 240
              ||||||| ||||||||| || |||||||| || ||| | || || ||  ||||||| || 
Sbjct: 136645 ctcatggcgcacgccaccacgtggtggggacgcctggcggagctcgcgctggactccgcc 136586

                                                                          
Query: 241    gacgcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcg 300
              ||||| ||||| ||||| || || ||||| || ||| |||| ||||||||||||||||||
Sbjct: 136585 gacgccgtggccgccgcggcgtttgaggcgctggctaggctcttccaggagctggacgcg 136526

                                              
Query: 301    cggcgtatgagccggcttgctggggacaagct 332
              || || |||||||||||||| |||||||||||
Sbjct: 136525 cgccgcatgagccggcttgccggggacaagct 136494
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  270 bits (136), Expect = 3e-69
 Identities = 283/332 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1       atcgcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcac 60
               |||||||||||||| || ||||| || ||||| |||||  | |||||||||||||| |||
Sbjct: 3769153 atcgcctcgttcccctcgctcccttcccacctcctcccgtcgctcctctcctcggcccac 3769094

                                                                           
Query: 61      gccgacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacc 120
               ||||||||||| ||||| |||||||| ||||||||||| |||||||| || || || |||
Sbjct: 3769093 gccgacatcgccgccgcgctctcctcccccgccgagtcgctccgcctcgcggcggtgacc 3769034

                                                                           
Query: 121     tccctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcg 180
               || |||||||| ||||||||||| || ||||| ||||||||||||||| ||||||| |||
Sbjct: 3769033 tcgctctcctcgctcctcccgcgggacgacctcgcgctcatgtgctcctccaacccgtcg 3768974

                                                                           
Query: 181     ctcatggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgca 240
               ||||||| ||||||||| || |||||||| || ||| | || || ||  ||||||| || 
Sbjct: 3768973 ctcatggcgcacgccaccacgtggtggggacgcctggcggagctcgcgctggactccgcc 3768914

                                                                           
Query: 241     gacgcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcg 300
               ||||| ||||| ||||| || || ||||| || ||| |||| ||||||||||||||||||
Sbjct: 3768913 gacgccgtggccgccgcggcgtttgaggcgctggctaggctcttccaggagctggacgcg 3768854

                                               
Query: 301     cggcgtatgagccggcttgctggggacaagct 332
               || || |||||||||||||| |||||||||||
Sbjct: 3768853 cgccgcatgagccggcttgccggggacaagct 3768822
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  270 bits (136), Expect = 3e-69
 Identities = 283/332 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1       atcgcctcgttcccgtcactcccctcgcacctactcccaaccctcctctcctcggcgcac 60
               |||||||||||||| || ||||| || ||||| |||||  | |||||||||||||| |||
Sbjct: 3777847 atcgcctcgttcccctcgctcccttcccacctcctcccgtcgctcctctcctcggcccac 3777788

                                                                           
Query: 61      gccgacatcgctgccgctctctcctcgcccgccgagtcactccgccttgccgccgtcacc 120
               ||||||||||| ||||| |||||||| ||||||||||| |||||||| || || || |||
Sbjct: 3777787 gccgacatcgccgccgcgctctcctcccccgccgagtcgctccgcctcgcggcggtgacc 3777728

                                                                           
Query: 121     tccctctcctccctcctcccgcgcgatgacctagcgctcatgtgctccaccaacccctcg 180
               || |||||||| ||||||||||| || ||||| ||||||||||||||| ||||||| |||
Sbjct: 3777727 tcgctctcctcgctcctcccgcgggacgacctcgcgctcatgtgctcctccaacccgtcg 3777668

                                                                           
Query: 181     ctcatggggcacgccacaacctggtggggtcgtctgaccgaactggccttggactctgca 240
               ||||||| ||||||||| || |||||||| || ||| | || || ||  ||||||| || 
Sbjct: 3777667 ctcatggcgcacgccaccacgtggtggggacgcctggcggagctcgcgctggactccgcc 3777608

                                                                           
Query: 241     gacgcagtggcagccgcagcattcgaggcacttgctcggctgttccaggagctggacgcg 300
               ||||| ||||| ||||| || || ||||| || ||| |||| ||||||||||||||||||
Sbjct: 3777607 gacgccgtggccgccgcggcgtttgaggcgctggctaggctcttccaggagctggacgcg 3777548

                                               
Query: 301     cggcgtatgagccggcttgctggggacaagct 332
               || || |||||||||||||| |||||||||||
Sbjct: 3777547 cgccgcatgagccggcttgccggggacaagct 3777516
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>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence
          Length = 170494

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 119   cctccctctcctccctcctccc 140
             ||||||||||||||||||||||
Sbjct: 85553 cctccctctcctccctcctccc 85574
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>emb|AL645962.22| Mouse DNA sequence from clone RP23-217L7 on chromosome 11 Contains the
             Olfr54 gene for olfactory receptor 54, the gene for a
             novel protein (olfactory receptor MOR126-2 (MOR126-2)) and
             the Zfp354a gene for zinc finger protein 354A, complete
             sequence
          Length = 82484

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 119   cctccctctcctccctcctccc 140
             ||||||||||||||||||||||
Sbjct: 72454 cctccctctcctccctcctccc 72475
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>gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113027

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 119   cctccctctcctccctcctccc 140
             ||||||||||||||||||||||
Sbjct: 33848 cctccctctcctccctcctccc 33869
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>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence
          Length = 236514

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 119   cctccctctcctccctcctccc 140
             ||||||||||||||||||||||
Sbjct: 39867 cctccctctcctccctcctccc 39846
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>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence
          Length = 203574

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   cctccctctcctccctcctcc 139
             |||||||||||||||||||||
Sbjct: 47898 cctccctctcctccctcctcc 47878



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   cctccctctcctccctcctcc 139
             |||||||||||||||||||||
Sbjct: 47749 cctccctctcctccctcctcc 47729
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>gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome 9, complete sequence
          Length = 166474

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    ctccctctcctccctcctccc 140
              |||||||||||||||||||||
Sbjct: 113193 ctccctctcctccctcctccc 113173
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>gb|AC165955.3| Mus musculus BAC clone RP23-458A8 from chromosome 7, complete sequence
          Length = 203253

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    cctccctctcctccctcctcc 139
              |||||||||||||||||||||
Sbjct: 192897 cctccctctcctccctcctcc 192877
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>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete sequence
          Length = 178725

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    cctccctctcctccctcctcc 139
              |||||||||||||||||||||
Sbjct: 170155 cctccctctcctccctcctcc 170135



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    cctccctctcctccctcctcc 139
              |||||||||||||||||||||
Sbjct: 170006 cctccctctcctccctcctcc 169986
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>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence
          Length = 223522

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    cctccctctcctccctcctcc 139
              |||||||||||||||||||||
Sbjct: 145343 cctccctctcctccctcctcc 145323
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>gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosome 10, complete
             sequence
          Length = 182735

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   acctccctctcctccctcctc 138
             |||||||||||||||||||||
Sbjct: 89248 acctccctctcctccctcctc 89268
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>gb|AC018515.7| Homo sapiens chromosome , clone RP11-250G15, complete sequence
          Length = 123722

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   cctccctctcctccctcctcc 139
             |||||||||||||||||||||
Sbjct: 76992 cctccctctcctccctcctcc 77012
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>gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 208535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   acctccctctcctccctcctc 138
             |||||||||||||||||||||
Sbjct: 97494 acctccctctcctccctcctc 97474
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>gb|AC122024.6| Mus musculus BAC clone RP24-378K7 from chromosome 10, complete sequence
          Length = 183904

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    acctccctctcctccctcctc 138
              |||||||||||||||||||||
Sbjct: 181176 acctccctctcctccctcctc 181196
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>gb|AF123438.1|AF123438 Haloarcula hispanica 3-hydroxy-3-methylglutaryl coenzyme A reductase
            (hmg) gene, complete cds
          Length = 1601

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 45   cctctcctcggcgcacgccga 65
            |||||||||||||||||||||
Sbjct: 1306 cctctcctcggcgcacgccga 1326
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>gb|AC022309.16|AC022309 Homo sapiens chromosome 15 clone RP11-67O17, complete sequence
          Length = 172482

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    cctccctctcctccctcctcc 139
              |||||||||||||||||||||
Sbjct: 133653 cctccctctcctccctcctcc 133673
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>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    ctccctctcctccctcctccc 140
              |||||||||||||||||||||
Sbjct: 137562 ctccctctcctccctcctccc 137542
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>gb|U88832.1|HSGROUCH2 Human groucho protein homolog (AES) gene, exons 2-7 and complete cds
          Length = 12524

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  ctccctctcctccctcctccc 140
            |||||||||||||||||||||
Sbjct: 7002 ctccctctcctccctcctccc 6982
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>gb|AC005944.1|AC005944 Homo sapiens chromosome 19, cosmid F23613, complete sequence
          Length = 42301

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 119  cctccctctcctccctcctcc 139
            |||||||||||||||||||||
Sbjct: 8644 cctccctctcctccctcctcc 8664
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>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete
             sequence
          Length = 216244

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   acctccctctcctccctcctc 138
             |||||||||||||||||||||
Sbjct: 23768 acctccctctcctccctcctc 23748
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>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence
          Length = 189789

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 129815 cctccctctcctccctcctc 129796



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 129779 cctccctctcctccctcctc 129760



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 129725 cctccctctcctccctcctc 129706
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>ref|NM_111044.2| Arabidopsis thaliana unknown protein AT3G01780 mRNA, complete cds
          Length = 3790

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 307 atgagccggcttgctggggacaagctcgttga 338
           |||||||| |||||||| || |||||||||||
Sbjct: 709 atgagccgtcttgctggcgataagctcgttga 740
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>ref|XM_468544.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 cctccctctcctccctcctc 138
           ||||||||||||||||||||
Sbjct: 416 cctccctctcctccctcctc 435
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>ref|NM_001030669.1| Gallus gallus RAB35, member RAS oncogene family (RAB35), mRNA
          Length = 3203

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 109 gccgccgtcacctccctctcctccctcc 136
           ||||||||| |||||| |||||||||||
Sbjct: 39  gccgccgtcccctccccctcctccctcc 66
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>gb|AF182035.1| Homo sapiens skeletal muscle alpha-actin gene (ACTA1), complete cds
          Length = 3783

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ctgttccaggagctggacgc 299
            ||||||||||||||||||||
Sbjct: 1362 ctgttccaggagctggacgc 1343
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>gb|AC122774.11| Mus musculus chromosome 15, clone RP24-189C9, complete sequence
          Length = 154384

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctccctctcctccctcctcc 139
             ||||||||||||||||||||
Sbjct: 84282 ctccctctcctccctcctcc 84263
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>ref|XM_584006.2| PREDICTED: Bos taurus similar to Musculin (Activated B-cell factor 1)
            (ABF-1) (LOC507407), mRNA
          Length = 2009

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 117  cacctccctctcctccctcctccc 140
            ||||||||||| ||||||||||||
Sbjct: 1732 cacctccctctgctccctcctccc 1755
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>gb|AE009196.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 222 of
             256 of the complete sequence
          Length = 13204

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gccttgccgccgtcacctcc 123
             ||||||||||||||||||||
Sbjct: 12692 gccttgccgccgtcacctcc 12673
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>gb|AC138792.2| Mus musculus BAC clone RP23-235I2 from chromosome 8, complete sequence
          Length = 181841

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctccctctcctccctcctcc 139
             ||||||||||||||||||||
Sbjct: 25750 ctccctctcctccctcctcc 25731
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>gb|AC165361.3| Mus musculus BAC clone RP23-77H6 from chromosome 17, complete sequence
          Length = 228753

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctccctctcctccctcctcc 139
             ||||||||||||||||||||
Sbjct: 99909 ctccctctcctccctcctcc 99890
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>emb|CT009710.8| Mouse DNA sequence from clone RP23-131M7 on chromosome 16, complete
              sequence
          Length = 220104

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 189733 cctccctctcctccctcctc 189752
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>ref|XM_568750.1| Cryptococcus neoformans var. neoformans JEC21 WD-repeat protein
           (CNB00040) partial mRNA
          Length = 2033

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 cctccctctcctccctcctc 138
           ||||||||||||||||||||
Sbjct: 727 cctccctctcctccctcctc 746
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>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete
             sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ctccctctcctccctcctcc 139
             ||||||||||||||||||||
Sbjct: 80486 ctccctctcctccctcctcc 80505
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>gb|AC122241.4| Mus musculus BAC clone RP23-146M20 from chromosome 15, complete sequence
          Length = 195429

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    tcacctccctctcctccctcctcc 139
              |||| |||||||||||||||||||
Sbjct: 173968 tcacttccctctcctccctcctcc 173991
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>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete
              sequence
          Length = 105543

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 307    atgagccggcttgctggggacaagctcgttga 338
              |||||||| |||||||| || |||||||||||
Sbjct: 101759 atgagccgtcttgctggcgataagctcgttga 101790
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>gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence,
             complete sequence
          Length = 89154

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 307   atgagccggcttgctggggacaagctcgttga 338
             |||||||| |||||||| || |||||||||||
Sbjct: 24465 atgagccgtcttgctggcgataagctcgttga 24496
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>gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome 17, complete
            sequence
          Length = 197213

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  ctccctctcctccctcctcc 139
            ||||||||||||||||||||
Sbjct: 9756 ctccctctcctccctcctcc 9737
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>emb|AL353685.23| Human DNA sequence from clone RP11-31J20 on chromosome 9 Contains part
             of the ABCA1 gene for ATP-binding cassette sub-family A
             (ABC1) member 1, complete sequence
          Length = 129608

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tccctctcctccctcctccc 140
             ||||||||||||||||||||
Sbjct: 85708 tccctctcctccctcctccc 85689
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>emb|AL160004.18| Human DNA sequence from clone RP5-1068B5 on chromosome 1q42.11-43
             Contains a pseudogene similar to part of ribosomal protein
             L21 (RPL21), the ACTA1 gene for actin, alpha 1, skeletal
             muscle, the 3' end of the NUP133 gene for nucleoporin
             133kDa and two CpG islands, complete sequence
          Length = 86173

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   ctgttccaggagctggacgc 299
             ||||||||||||||||||||
Sbjct: 54693 ctgttccaggagctggacgc 54712
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>emb|AL133510.13| Human DNA sequence from clone RP3-481C9 on chromosome 6q25.1-26 Contains
              the 3' end of a novel gene, complete sequence
          Length = 122680

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    cacctccctctcctccctcc 136
              ||||||||||||||||||||
Sbjct: 122012 cacctccctctcctccctcc 122031
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>gb|AY177248.1| Oryctolagus cuniculus whey acidic protein (WAP) gene, upstream
           regulatory region
          Length = 2560

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 ctgcagacgcagtggcagcc 255
           ||||||||||||||||||||
Sbjct: 615 ctgcagacgcagtggcagcc 634
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>gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, complete sequence
          Length = 119991

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ccgctctctcctcgcccgcc 93
             ||||||||||||||||||||
Sbjct: 60525 ccgctctctcctcgcccgcc 60506
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>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the
             5' end of the Arf-1 gene for ADP-ribosylation factor 1,
             the Wnt3a gene for wingless-related MMTV integration site
             3A, the Wnt9a gene for wingless-type MMTV integration site
             9A, two novel genes, the 5' end of a novel gene and five
             CpG islands, complete sequence
          Length = 225396

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 99005 cctccctctcctccctcctc 99024
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>emb|AJ851375.1| Gallus gallus mRNA for hypothetical protein, clone 1b12
          Length = 3203

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 109 gccgccgtcacctccctctcctccctcc 136
           ||||||||| |||||| |||||||||||
Sbjct: 39  gccgccgtcccctccccctcctccctcc 66
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>emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chromosome 11, complete
              sequence
          Length = 214665

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ctccctctcctccctcctcc 139
              ||||||||||||||||||||
Sbjct: 191697 ctccctctcctccctcctcc 191716
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>emb|AL833227.1|HSM804538 Homo sapiens genomic DNA; cDNA DKFZp667M067 (from clone
           DKFZp667M067)
          Length = 3298

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 tccctctcctccctcctccc 140
           ||||||||||||||||||||
Sbjct: 783 tccctctcctccctcctccc 802
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>gb|AC154716.3| Mus musculus BAC clone RP24-362G2 from chromosome 16, complete sequence
          Length = 178456

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 135059 cctccctctcctccctcctc 135078
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
            sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  cctccctctcctccctcctc 138
            ||||||||||||||||||||
Sbjct: 7226 cctccctctcctccctcctc 7245
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>emb|CR599788.1| full-length cDNA clone CS0DC013YA17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1536

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 74  ccgctctctcctcgcccgcc 93
           ||||||||||||||||||||
Sbjct: 486 ccgctctctcctcgcccgcc 505
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 104     gccttgccgccgtcacctcc 123
               ||||||||||||||||||||
Sbjct: 2469643 gccttgccgccgtcacctcc 2469624
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>gb|AF287262.1|AF287262 Homo sapiens ATP-binding cassette 1 sub-family A member 1 (ABCA1) and
             SNAP protein genes, complete cds
          Length = 201144

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tccctctcctccctcctccc 140
             ||||||||||||||||||||
Sbjct: 93218 tccctctcctccctcctccc 93237
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      cctccctctcctccctcctc 138
                ||||||||||||||||||||
Sbjct: 22333210 cctccctctcctccctcctc 22333191
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>gb|BT004227.1| Arabidopsis thaliana clone RAFL16-01-H05 (R20885) unknown protein
           (At3g01780) mRNA, partial cds
          Length = 3517

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 307 atgagccggcttgctggggacaagctcgttga 338
           |||||||| |||||||| || |||||||||||
Sbjct: 709 atgagccgtcttgctggcgataagctcgttga 740
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>gb|AC009301.3| Homo sapiens BAC clone RP11-62F14 from 2, complete sequence
          Length = 129625

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tccctctcctccctcctccc 140
             ||||||||||||||||||||
Sbjct: 83901 tccctctcctccctcctccc 83920
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>gb|AF275948.1|AF275948 Homo sapiens ABCA1 (ABCA1) gene, complete cds
          Length = 149034

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tccctctcctccctcctccc 140
             ||||||||||||||||||||
Sbjct: 60600 tccctctcctccctcctccc 60619
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>gb|AC112643.12| Homo sapiens 3 BAC RP11-328G15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96041

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 110   ccgccgtcacctccctctcctccctcctcccg 141
             |||||||| ||||||||  |||||||||||||
Sbjct: 37645 ccgccgtcccctccctccgctccctcctcccg 37676
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0567H04
          Length = 181420

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 138456 cctccctctcctccctcctc 138437
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>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0539D10
          Length = 158691

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gctcatgtgctccaccaacc 175
             ||||||||||||||||||||
Sbjct: 24918 gctcatgtgctccaccaacc 24899
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>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 40086 cctccctctcctccctcctc 40067
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>gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206125

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctccctctcctccctcctcc 139
             ||||||||||||||||||||
Sbjct: 90776 ctccctctcctccctcctcc 90757
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>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0486G03
          Length = 146713

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    gctcatgtgctccaccaacc 175
              ||||||||||||||||||||
Sbjct: 117561 gctcatgtgctccaccaacc 117542
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>dbj|AK106522.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D01, full
           insert sequence
          Length = 1794

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 cctccctctcctccctcctc 138
           ||||||||||||||||||||
Sbjct: 303 cctccctctcctccctcctc 322
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>dbj|AK105369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B08, full
           insert sequence
          Length = 727

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 cctccctctcctccctcctc 138
           ||||||||||||||||||||
Sbjct: 137 cctccctctcctccctcctc 156
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>dbj|AK101449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039M15, full
           insert sequence
          Length = 1905

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 cctccctctcctccctcctc 138
           ||||||||||||||||||||
Sbjct: 416 cctccctctcctccctcctc 435
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>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence
          Length = 223470

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 67040 cctccctctcctccctcctc 67021



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 67004 cctccctctcctccctcctc 66985



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 66950 cctccctctcctccctcctc 66931
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 226505 cctccctctcctccctcctc 226524
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>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete
              sequence
          Length = 215154

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 107759 cctccctctcctccctcctc 107778
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>gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, complete sequence
          Length = 159515

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 65272 cctccctctcctccctcctc 65291
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>gb|AC129321.5| Mus musculus BAC clone RP24-160I20 from 8, complete sequence
          Length = 198439

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ctccctctcctccctcctcc 139
              ||||||||||||||||||||
Sbjct: 192350 ctccctctcctccctcctcc 192331
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>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cctccctctcctccctcctc 138
             ||||||||||||||||||||
Sbjct: 43338 cctccctctcctccctcctc 43319
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>emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chromosome 13, complete
              sequence
          Length = 218811

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cctccctctcctccctcctc 138
              ||||||||||||||||||||
Sbjct: 202635 cctccctctcctccctcctc 202616
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      ggcgcacgccgacatcgctg 73
               ||||||||||||||||||||
Sbjct: 1050348 ggcgcacgccgacatcgctg 1050329
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>emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on chromosome 11, complete
             sequence
          Length = 198011

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ctccctctcctccctcctcc 139
             ||||||||||||||||||||
Sbjct: 74680 ctccctctcctccctcctcc 74699
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>gb|M20543.1|HUMSAACT Human skeletal alpha-actin gene, complete cds
          Length = 3778

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ctgttccaggagctggacgc 299
            ||||||||||||||||||||
Sbjct: 1363 ctgttccaggagctggacgc 1344


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,476,035
Number of Sequences: 3902068
Number of extensions: 2476035
Number of successful extensions: 72969
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72496
Number of HSP's gapped (non-prelim): 470
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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