Clone Information

BLAST Search Result

Clone Name	bastl13g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NOL6_MOUSE (Q8R5K4) Nucleolar protein 6 (Nucleolar RNA-associate...	47	1e-05
2	NOL6_HUMAN (Q9H6R4) Nucleolar protein 6 (Nucleolar RNA-associate...	40	0.001
3	NOL6_XENLA (Q6NRY2) Nucleolar protein 6	40	0.002
4	NOL6_XENTR (Q5M7P5) Nucleolar protein 6	38	0.005
5	YMP3_STRCO (P43168) Hypothetical oxidoreductase in mprA 5'region...	33	0.13
6	Y2559_MYCTU (Q50739) Hypothetical protein Rv2559c/MT2636	33	0.22
7	SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-...	33	0.22
8	CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)	31	0.64
9	SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-...	31	0.64
10	SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-...	31	0.64
11	ERF_MOUSE (P70459) ETS domain-containing transcription factor ERF	31	0.64
12	VSX1_CHICK (Q9IAL2) Visual system homeobox 1 (Transcription fact...	31	0.83
13	UTP22_YEAST (P53254) Nucleolar protein UTP22	30	1.4
14	K1543_MOUSE (Q80VC9) Protein KIAA1543	30	1.4
15	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	30	1.9
16	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	1.9
17	CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor	30	1.9
18	DPY2_CAEEL (P35799) Cuticle collagen dpy-2 precursor (Protein du...	29	2.4
19	MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter (H(+)-myo-...	29	2.4
20	LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)	29	2.4
21	RPOB_STAPU (Q32RW5) DNA-directed RNA polymerase beta chain (EC 2...	29	3.2
22	ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disint...	29	3.2
23	DNAE2_GLUOX (Q5HXU1) Error-prone DNA polymerase (EC 2.7.7.7)	29	3.2
24	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	29	3.2
25	TNKS2_HUMAN (Q9H2K2) Tankyrase 2 (EC 2.4.2.30) (TANK2) (Tankyras...	28	4.1
26	DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing pr...	28	4.1
27	YJP1_SCHPO (Q9P6S0) Hypothetical threonine-rich protein C1742.01...	28	4.1
28	HISX_NITMU (Q2YAU5) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)	28	5.4
29	DAPB_METBF (Q46DC3) Dihydrodipicolinate reductase (EC 1.3.1.26) ...	28	5.4
30	STRN_HUMAN (O43815) Striatin	28	5.4
31	TRPA_BRAJA (Q89WE4) Tryptophan synthase alpha chain (EC 4.2.1.20)	28	5.4
32	NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleop...	28	5.4
33	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	28	5.4
34	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	28	5.4
35	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	28	5.4
36	AREA_EMENI (P17429) Nitrogen regulatory protein areA	28	5.4
37	HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)	28	7.0
38	Y829_FRATT (Q5NGK7) Hypothetical transport protein FTT0829c	28	7.0
39	TLN1_MOUSE (P26039) Talin-1	28	7.0
40	TLN1_HUMAN (Q9Y490) Talin-1	28	7.0
41	HERC5_HUMAN (Q9UII4) HECT domain and RCC1-like domain-containing...	28	7.0
42	YM93_YEAST (P40308) Hypothetical 73.6 kDa protein in GLC8-PRE5 i...	28	7.0
43	CCPR2_ASPFU (Q4WLG9) Putative heme-binding peroxidase (EC 1.11.1.-)	28	7.0
44	TFAE_ECOLI (P09153) Tail fiber assembly protein homolog from lam...	28	7.0
45	SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs...	28	7.0
46	PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-b...	28	7.0
47	ODB2_BACSU (P37942) Lipoamide acyltransferase component of branc...	28	7.0
48	SYR_CHRVO (Q7NWM1) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini...	28	7.0
49	IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 ...	28	7.0
50	IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 ...	28	7.0
51	ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disint...	28	7.0
52	LEG3_RAT (P08699) Galectin-3 (Galactose-specific lectin 3) (Mac-...	27	9.2
53	CISY_PIG (P00889) Citrate synthase, mitochondrial precursor (EC ...	27	9.2
54	CISY_MOUSE (Q9CZU6) Citrate synthase, mitochondrial precursor (E...	27	9.2
55	P66A_HUMAN (Q86YP4) Transcriptional repressor p66 alpha (Hp66alp...	27	9.2
56	GPDA_ANASP (Q8YWC2) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	27	9.2
57	ZN488_HUMAN (Q96MN9) Zinc finger protein 488	27	9.2
58	RUVA_SHIDS (Q32HA0) Holliday junction ATP-dependent DNA helicase...	27	9.2
59	RIBAB_WOLSU (Q7M936) Riboflavin biosynthesis protein ribAB [Incl...	27	9.2
60	SUFU_HUMAN (Q9UMX1) Suppressor of fused homolog (SUFUH)	27	9.2
61	SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated a...	27	9.2
62	SFSA_PYRFU (Q8U1K8) Sugar fermentation stimulation protein homolog	27	9.2
63	PDE2_CAEEL (P30645) Probable 3',5'-cyclic phosphodiesterase pde-...	27	9.2

>NOL6_MOUSE (Q8R5K4) Nucleolar protein 6 (Nucleolar RNA-associated protein)|
           (Nrap)
          Length = 1141

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
 Frame = +3

Query: 72  LKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLA------ 233
           L++ ELLK+ R S             V + I+ VPP   A      ++   G+       
Sbjct: 84  LQVEELLKEVRLSEKKKERIDNFLKEVTKRIQKVPPVPEAELTDQSWL-PAGVRVPLHQV 142

Query: 234 --AEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKD 374
             A K +F FRPP  + + GS+      RPD+  D+ V +P+E   +KD
Sbjct: 143 PYAVKGSFRFRPPSQITVVGSYLLDTCMRPDINVDVAVTMPREILQDKD 191

to top

>NOL6_HUMAN (Q9H6R4) Nucleolar protein 6 (Nucleolar RNA-associated protein)|
           (Nrap)
          Length = 1146

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +3

Query: 234 AEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKD 374
           A K  F F PP  V + GS+  G   RPD+  D+ + +P+E   +KD
Sbjct: 147 AVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDVALTMPREILQDKD 193

to top

>NOL6_XENLA (Q6NRY2) Nucleolar protein 6|
          Length = 1147

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 249 FSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKD 374
           FSF PP  +++ GS+  G   +P++  DL V +P+E    KD
Sbjct: 152 FSFLPPSSIKVVGSYLLGTCIKPEINVDLAVTMPQEILQVKD 193

to top

>NOL6_XENTR (Q5M7P5) Nucleolar protein 6|
          Length = 1145

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 249 FSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKD 374
           F F PP  +++ GS+  G   +P++  DL V +P+E    KD
Sbjct: 152 FCFLPPSSIKVVGSYLLGTCIKPEINVDLAVTMPQEILQAKD 193

to top

>YMP3_STRCO (P43168) Hypothetical oxidoreductase in mprA 5'region (EC 1.-.-.-)|
           (ORF3)
          Length = 251

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
 Frame = +3

Query: 99  ARPSATSLRAAGEATDAVGELIKSVPPQQAAPEA---------ASGFVRDL-----GLAA 236
           ARPS    +AAGE T A+G  +++VP     PE+         A+G V DL     G+A 
Sbjct: 41  ARPSPALEKAAGELT-ALGAEVRTVPFDALDPESHQASLGPVFAAGDV-DLVLLRFGIAG 98

Query: 237 EKLAFSFRPPEVVRLAGSHAAGAV 308
           ++     RP + VR+A ++  GAV
Sbjct: 99  DQARDESRPLDAVRVAQTNYTGAV 122

to top

>Y2559_MYCTU (Q50739) Hypothetical protein Rv2559c/MT2636|
          Length = 452

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +3

Query: 42  AMVSAEYSIDLKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRD 221
           A+  A  ++DL +      AR + T+L  A EA  A GEL+     +++  +AA  + RD
Sbjct: 202 AVAVAPEAVDLLVQLAAGDARRALTALEVAAEAAQAAGELVSVQTIERSVDKAAVRYDRD 261

to top

>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)|
          Length = 521

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = +3

Query: 174 PPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPK 353
           P QQ         +  LG    +LAF+  PP VV LAG   +G  T   +A  L VRL +
Sbjct: 70  PAQQIVKIVNEELIGILGGETRQLAFAKTPPTVVMLAGLQGSGKTT---LAGKLAVRLRR 126

Query: 354 E 356
           +
Sbjct: 127 Q 127

to top

>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)|
          Length = 325

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -1

Query: 347 QADEKVRGDVG----PGDRAGRVAPGEPHHLRRPEGKR*LFGREA-QVPHEPRG 201
           + +  VRGD+G    PG +     PGEP  LR PEG R L G E  + P  PRG
Sbjct: 88  EGEAGVRGDLGDMGQPGPKGSVGNPGEPG-LRGPEGIRGLPGVEGPRGPPGPRG 140

to top

>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = +3

Query: 174 PPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRL 347
           P QQ         +  LG    +LAF+  PP VV LAG   +G  T   +A  L  RL
Sbjct: 70  PAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTT---LAGKLAARL 124

to top

>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = +3

Query: 174 PPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRL 347
           P QQ         +  LG    +LAF+  PP VV LAG   +G  T   +A  L  RL
Sbjct: 70  PAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTT---LAGKLAARL 124

to top

>ERF_MOUSE (P70459) ETS domain-containing transcription factor ERF|
          Length = 551

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 341 DEKVRGDVGPGDRAGRVAP 285
           D+KVRGDVGPG+  G + P
Sbjct: 512 DKKVRGDVGPGESGGPLTP 530

to top

>VSX1_CHICK (Q9IAL2) Visual system homeobox 1 (Transcription factor VSX1)|
           (Homeobox protein Chx10-1)
          Length = 350

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 93  KQARPSATSLRAAGEA-TDAVGELIKSVPPQQAAPEAASGF 212
           + ARP    LRA G A TD +G   +  PP  AAP  A G+
Sbjct: 38  RSARPGGAGLRAKGFAITDLLGLEAELQPPPGAAPGPAGGY 78

to top

>UTP22_YEAST (P53254) Nucleolar protein UTP22|
          Length = 1237

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 249 FSFRPPEVVRLAGSHAAGAVTRPDVAS-DLLVRLPKECFHEKDF 377
           F+++ P++  +        + +P+ +S D L+ +PKE F +KDF
Sbjct: 176 FNYKKPDISLIGSFALKAGIYQPNGSSIDTLLTMPKELFEKKDF 219

to top

>K1543_MOUSE (Q80VC9) Protein KIAA1543|
          Length = 1252

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +3

Query: 147 AVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVA 326
           + GE++K  PP + +P+A +          +  +F+ R  ++V+       G+ T   VA
Sbjct: 534 STGEILKPPPPSEGSPKAVASSPAANNSEVKMTSFAERKKQLVKAEAESGLGSPTSTPVA 593

Query: 327 SDLL 338
            + L
Sbjct: 594 PEAL 597

to top

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -1

Query: 314  PGDRAGRVAPGEPHHLRRP---EGKR*LFGREAQVPHEPRGSLR 192
            PG+ +    P EPH  R P   EG+R    RE  +P  P G+ R
Sbjct: 1697 PGESSSASEPSEPHRRRPPASHEGERKELPREQPLPPGPIGTER 1740

to top

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +1

Query: 253 PSGRRRWCGSPGATRPARSPGPTSP 327
           P GRRR   SP  TR  RSP P  P
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPP 566

to top

>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = -1

Query: 347 QADEKVRGDVG----PGDRAGRVAPGEPHHLRRPEGKR*LFGREA-QVPHEPRG 201
           + +   RGD+G    PG +     PGEP  LR PEG R L G E  + P  PRG
Sbjct: 684 EGEAGARGDLGDMGQPGPKGSVGNPGEPG-LRGPEGIRGLPGVEGPRGPPGPRG 736

to top

>DPY2_CAEEL (P35799) Cuticle collagen dpy-2 precursor (Protein dumpy-2)|
          Length = 360

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 259 GRRRWCGSPGATRPARSPGPTSP 327
           G + W G PGA  P   PGP  P
Sbjct: 268 GEKGWPGPPGAPGPGGMPGPNGP 290

to top

>MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter (H(+)-myo-inositol|
           cotransporter) (Hmit)
          Length = 629

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +3

Query: 15  RRRQPTIEAAMVSAEYSIDLKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQ 182
           RR+QP  +AA  + E S        L  A  S+TSL++AG     VG+L ++   Q
Sbjct: 5   RRKQPEPDAASAAGECS--------LLAAAESSTSLQSAGAGGGGVGDLERAARRQ 52

to top

>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)|
          Length = 1401

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +3

Query: 72  LKLSELLKQARPSATSLRAAGE--ATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKL 245
           + + E++++A  S   +R  GE    +   E+   +  QQ   + AS  + DL       
Sbjct: 2   ISVGEIMERANHSLVRMRREGEDLTLEEKAEICSELELQQKYVDIASNIIGDLSSL---- 57

Query: 246 AFSFRPPEVVRLAGSHAAGAVTRPDVASDLL 338
                 P   ++AG+ AA A+T   VAS  L
Sbjct: 58  ------PIAGKIAGTIAAAAMTATHVASGRL 82

to top

>RPOB_STAPU (Q32RW5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta subunit) (RNA
           polymerase beta subunit)
          Length = 1068

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = -1

Query: 335 KVRGDVGPGD-RAGRVAPGE-PHHLRRPEGK--R*LFGREAQVPHE 210
           K+   V PGD   G++AP E PH LR PEGK  + +FG +A    E
Sbjct: 727 KIGAWVEPGDVLVGKLAPLEAPHLLRSPEGKLLQAIFGVQAITTRE 772

to top

>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 16)
           (ADAM-TS 16) (ADAM-TS16)
          Length = 1224

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 298 AAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 170
           ++W P SRT  GG        + R R  TNP+ + G   C G+
Sbjct: 593 SSWSPCSRTCGGG-------VSHRSRLCTNPKPSHGGKFCEGS 628

to top

>DNAE2_GLUOX (Q5HXU1) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 901

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
 Frame = +3

Query: 123 RAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAE--KLAFSFRPPEVV----RLA 284
           +  G   D  G+L K +    A P+       DLGL  +  +L+ +F    ++    R  
Sbjct: 281 KVLGLPEDLTGQLSKHIASSLADPDLCKARAADLGLNLKDRRLSLTFHLARLLLGFPRQL 340

Query: 285 GSHAAGAVTRPDVASDLLVRLP 350
           G+H  G V   D   +L+  +P
Sbjct: 341 GTHPGGFVLTEDRLDELVPLMP 362

to top

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 256 SGRRRWCGSPGATRPARSPGPTSP 327
           SGRRR   SP  TR  RSP P  P
Sbjct: 557 SGRRRRSPSPPPTRRRRSPSPAPP 580

to top

>TNKS2_HUMAN (Q9H2K2) Tankyrase 2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase
           2) (Tankyrase-like protein) (Tankyrase-related protein)
          Length = 1166

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 280 SPGATRPARSPGPTSPLTFSSA 345
           SPGAT  A S GP+SP + S+A
Sbjct: 817 SPGATADALSSGPSSPSSLSAA 838

to top

>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 280 SRTTSGGRKENASFSAARPRSLTNPEAASGAACC 179
           SR  SGG   N   S   PRS  +P    G A C
Sbjct: 527 SRGGSGGNSSNDKLSGPAPRSRLDPAKVLGTALC 560

to top

>YJP1_SCHPO (Q9P6S0) Hypothetical threonine-rich protein C1742.01 precursor|
          Length = 1563

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = -2

Query: 340 TRRSEATSGLVTAPAAWLPASRTTSGGRKENA-----SFSAARPRSLTNPEAASGAACCG 176
           T   EA+  +  +P+ +LP S TTSG +  NA     +F A    +  NP         G
Sbjct: 123 TSGKEASYAIQASPSTFLPDSTTTSGSQVSNAVEASSTFVADTTSTSCNPATVLIVTTSG 182

Query: 175 GT 170
            T
Sbjct: 183 ST 184

to top

>HISX_NITMU (Q2YAU5) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 440

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +3

Query: 93  KQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEV 272
           K A PS+  + A       VGEL+   P  Q       G V DL LAA  +        V
Sbjct: 138 KAAYPSSVLMNAIPAKVAGVGELVMVTPTPQ-------GEVNDLVLAAAAIC---EVDRV 187

Query: 273 VRLAGSHAAGAV 308
             + G+ A GA+
Sbjct: 188 FTIGGAQAVGAL 199

to top

>DAPB_METBF (Q46DC3) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)|
          Length = 263

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 36  EAAMVSAEYSIDL-KLSELLKQARPSATSLRAAGEATDAVG 155
           EAA   A+Y I++ +     K+  PS T+LRAA   ++AVG
Sbjct: 141 EAAKYLADYDIEIIEAHHNQKKDAPSGTALRAADIISEAVG 181

to top

>STRN_HUMAN (O43815) Striatin|
          Length = 780

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 362 KTFLRQADEKVRGDVGPGDRAGRVAPGEPHHL 267
           K+F+  ADE +  ++GPG+ AG     E   L
Sbjct: 407 KSFIMGADEALESELGPGELAGLTVANEADSL 438

to top

>TRPA_BRAJA (Q89WE4) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 278

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 66  IDLKLSELLKQARPSATSLRAAGEATDAVG-ELIKSVPPQQA 188
           ID++ +EL KQ R +  +   AG+   A   E+IK++P   A
Sbjct: 5   IDIRFAELAKQGRSAFVTFLMAGDPDPATSLEIIKALPKSGA 46

to top

>NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 525

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -2

Query: 322 TSGLVTAPAAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 170
           T+   T PAA  P + TTS G    AS +AA   S T   + S  A    T
Sbjct: 200 TTAGATQPAAATPTAATTSAGSTLFASIAAAPASSSTTVLSLSAPATTAAT 250

to top

>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 65  HRPQALRAPQASAAERHLS 121
           H+PQ  R+PQA+A+  HLS
Sbjct: 887 HQPQKARSPQAAASPAHLS 905

to top

>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 65  HRPQALRAPQASAAERHLS 121
           H+PQ  R+PQA+A+  HLS
Sbjct: 887 HQPQKARSPQAAASPAHLS 905

to top

>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 65  HRPQALRAPQASAAERHLS 121
           H+PQ  R+PQA+A+  HLS
Sbjct: 887 HQPQKARSPQAAASPAHLS 905

to top

>AREA_EMENI (P17429) Nitrogen regulatory protein areA|
          Length = 876

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -2

Query: 346 KRTRRSEATSGLVTAPAAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 170
           KR RR E  S +  A +     S T+SGGR +    + A P +  NP   S AA  G +
Sbjct: 812 KRQRRLEKASDVDMAESP----SSTSSGGRSKVVPLAPAMPPAAVNPANHSIAAGQGAS 866

to top

>HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)|
          Length = 5635

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 298  AAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGG 173
            + W   SRT +GG+         R R+  NP  ++G   CGG
Sbjct: 4764 SGWGTCSRTCNGGQMR-------RYRTCDNPPPSNGGRACGG 4798

to top

>Y829_FRATT (Q5NGK7) Hypothetical transport protein FTT0829c|
          Length = 571

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 162 IKSVPPQQA-APEAASGFVRDLGLA 233
           I+S+ PQ +  P  AS F+RDLGLA
Sbjct: 434 IRSIKPQFSNLPVGASNFIRDLGLA 458

to top

>TLN1_MOUSE (P26039) Talin-1|
          Length = 2541

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +3

Query: 78  LSELLKQARPSATS-----LRAAGEATDAVGELIKSVPPQQAAP 194
           +SELL+ A+P++       L+AAG    A GEL++ +      P
Sbjct: 619 VSELLRSAQPASAEPRQNLLQAAGNVGQASGELLQQIGESDTDP 662

to top

>TLN1_HUMAN (Q9Y490) Talin-1|
          Length = 2541

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +3

Query: 78  LSELLKQARPSATS-----LRAAGEATDAVGELIKSVPPQQAAP 194
           +SELL+ A+P++       L+AAG    A GEL++ +      P
Sbjct: 619 VSELLRSAQPASAEPRQNLLQAAGNVGQASGELLQQIGESDTDP 662

to top

>HERC5_HUMAN (Q9UII4) HECT domain and RCC1-like domain-containing protein 5|
           (Cyclin-E-binding protein 1)
          Length = 1024

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 229 SRPKS*RFPSGRRRWCGSPGATRPARSPGPTSPLTFSSACLRNVFMKRI 375
           SR KS R     R   G   AT+PA+SPG    L  S+A L    ++R+
Sbjct: 5   SRRKSRR---NGRSTAGKAAATQPAKSPGAQLWLFPSAAGLHRALLRRV 50

to top

>YM93_YEAST (P40308) Hypothetical 73.6 kDa protein in GLC8-PRE5 intergenic|
           region
          Length = 642

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
 Frame = +3

Query: 93  KQARPSATSLRAAGEATDAVGE-LIKSVPPQQAAPEAASGFVRDLGL------AAEKLAF 251
           K  R S+ S   AG   D   E L+  VPP  A  ++A   + +LG+        E LAF
Sbjct: 472 KTQRSSSQSPIKAGTVEDLEPEPLMSPVPPSSAVNDSAEYIIPELGIPQLNFTEMEPLAF 531

Query: 252 SFR 260
            F+
Sbjct: 532 KFK 534

to top

>CCPR2_ASPFU (Q4WLG9) Putative heme-binding peroxidase (EC 1.11.1.-)|
          Length = 322

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +3

Query: 141 TDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAG 302
           TD V +    VPP+   P+A  G      L A      F   E+V LAG H  G
Sbjct: 117 TDLVDD--SKVPPRGRLPDATQGAEH---LRAVFYRMGFNDQEIVALAGGHTLG 165

to top

>TFAE_ECOLI (P09153) Tail fiber assembly protein homolog from lambdoid prophage|
           e14
          Length = 200

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = +3

Query: 18  RRQPTIEAAMVSAEYSIDLKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPE 197
           +RQ  I+AAM S    I LKL    K  +   T L A  +  DAV     S  P    PE
Sbjct: 138 QRQSLIDAAMASISL-IQLKLQAGRKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPE 196

to top

>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
 Frame = +3

Query: 99  ARPSATSLRAAG------EATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFR 260
           A P+    RA G      E TDA G       P ++APEAAS    +L      L  + +
Sbjct: 709 ASPTPPRARARGRGLGLSEPTDAGG-------PPRSAPEAASMLAAELRDKTRSLGRAEK 761

Query: 261 PPEVVRLAGSHAAGAVTRPDVASD 332
           PP   +   S    A  R   AS+
Sbjct: 762 PPPPQKAKRSVLPAATVRTASASE 785

to top

>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144)
          Length = 344

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 304 APAAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGA--ACCGGTL 167
           A ++ LP+  T S G   +    A  P S T P  ASGA  A  GG+L
Sbjct: 271 ATSSSLPSPATPSHGSPSSHGPPATHPTSPTPPSTASGATTAANGGSL 318

to top

>ODB2_BACSU (P37942) Lipoamide acyltransferase component of branched-chain|
           alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
           (Dihydrolipoyllysine-residue
           (2-methylpropanoyl)transferase) (E2) (Dihydrolipoamide
           branched chain transacylase)
          Length = 424

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
 Frame = +3

Query: 54  AEYSIDLKLSELLKQARPSATSLRAAGEATDAVGELIKSVPP-----------QQAAPEA 200
           AE   D   +E+      + T L      T  VGE+I  +             Q AA EA
Sbjct: 38  AEVMTDKVNAEVPSSFTGTITELVGEEGQTLQVGEMICKIETEGANPAEQKQEQPAASEA 97

Query: 201 ASGFVRDLGLAAEKLAFSFRPPEVVRLAGSH-----------AAGAVTRPDV 323
           A   V     AA++       P V+RLAG H           A G +TR D+
Sbjct: 98  AENPVAKSAGAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDI 149

to top

>SYR_CHRVO (Q7NWM1) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 572

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 352 LGKRTRRSEATSGLVTAPAAWLPASRTTSGGRKENASFSAARPRSLTNPEA 200
           + +R + + A +G   APA   PAS+   G  + N    AA+    TNP A
Sbjct: 7   INERVQAALAAAGAPDAPAVVQPASKPEFGDYQANGVMGAAKALK-TNPRA 56

to top

>IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1)
          Length = 1600

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 280 SPGATRPARSPGPTSPLTFSS 342
           SPG  +PA  PG T+P+ FS+
Sbjct: 15  SPGLPQPAFPPGQTAPVVFST 35

to top

>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 280 SPGATRPARSPGPTSPLTFSS 342
           SPG  +PA  PG T+P+ FS+
Sbjct: 15  SPGLPQPAFPPGQTAPVVFST 35

to top

>ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 16)
           (ADAM-TS 16) (ADAM-TS16)
          Length = 1222

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 292 WLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 170
           W P SRT  GG        + R R  TNP  + G   C G+
Sbjct: 593 WSPCSRTCGGG-------ISHRDRLCTNPRPSHGGKFCQGS 626

to top

>LEG3_RAT (P08699) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)|
           (IgE-binding protein) (35 kDa lectin)
           (Carbohydrate-binding protein 35) (CBP 35)
           (Laminin-binding protein) (Lectin L-29)
          Length = 261

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
 Frame = +1

Query: 217 GTWASRPKS*RFPS--------GRRRWCGSPGATRPARSPGPTSPLTF 336
           G W ++P +  +P         G+    G PG   P+  PGPT P  +
Sbjct: 23  GAWGNQPGAGGYPGASYPGAYPGQAPPGGYPGQAPPSAYPGPTGPSAY 70

to top

>CISY_PIG (P00889) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 464

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -1

Query: 344 ADEKVRGDVGPGDRAGRVAPGEPHHLRRPEGKR*LFGRE---AQVPHEP 207
           +DEK+R  +     +GRV PG  H + R    R    RE     +PH+P
Sbjct: 324 SDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPHDP 372

to top

>CISY_MOUSE (Q9CZU6) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 464

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -1

Query: 344 ADEKVRGDVGPGDRAGRVAPGEPHHLRRPEGKR*LFGREAQVPHEPR 204
           +DEK+R  +     +GRV PG  H + R    R    RE  + H P+
Sbjct: 324 SDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYSCQREFALKHLPK 370

to top

>P66A_HUMAN (Q86YP4) Transcriptional repressor p66 alpha (Hp66alpha) (GATA zinc|
           finger domain-containing protein 2A)
          Length = 633

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = +3

Query: 69  DLKLSE----LLKQARPSATSLRA-AGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLA 233
           +L+L E    LLK+ R S     A A + T +VG  + + PP     +        L  +
Sbjct: 151 ELRLEEAKLVLLKKLRQSQIQKEATAQKPTGSVGSTVTTPPPLVRGTQNIPAGKPSLQTS 210

Query: 234 AEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLV 341
           + ++  S  PP +VR  G   A +   P  +S +++
Sbjct: 211 SARMPGSVIPPPLVR--GGQQASSKLGPQASSQVVM 244

to top

>GPDA_ANASP (Q8YWC2) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 307

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 301 PAAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGTL 167
           PAA + ASR  +       +FS++R R  TNP+        GGTL
Sbjct: 122 PAATVVASRVATAAATVQLAFSSSRFRVYTNPDPV--GVELGGTL 164

to top

>ZN488_HUMAN (Q96MN9) Zinc finger protein 488|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 102 RPSATSLRAAGEATDAVGEL 161
           RP  TS+  AGE+ DA+GEL
Sbjct: 173 RPELTSVFPAGESADALGEL 192

to top

>RUVA_SHIDS (Q32HA0) Holliday junction ATP-dependent DNA helicase ruvA (EC|
           3.6.1.-)
          Length = 203

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 132 GEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVT 311
           G+      +L+ + P   A  +A    V  L      +A  ++P E  R+        + 
Sbjct: 137 GDLFTPAADLVLTSPASPATDDAEQEAVAAL------VALGYKPQEASRMVSK-----IA 185

Query: 312 RPDVASDLLVR 344
           RPDV+S+ L+R
Sbjct: 186 RPDVSSETLIR 196

to top

>RIBAB_WOLSU (Q7M936) Riboflavin biosynthesis protein ribAB [Includes: GTP|
           cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II);
           3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
           synthase)]
          Length = 347

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +3

Query: 87  LLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAF 251
           LL+  +  +T ++A  +  +  G +I    PQ AAP+     ++D G+ A+ L F
Sbjct: 258 LLESEKKYSTLMQAIKKIQEENGLIIFMDTPQNAAPQ-----IKDFGIGAQMLRF 307

to top

>SUFU_HUMAN (Q9UMX1) Suppressor of fused homolog (SUFUH)|
          Length = 484

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 277 GSPGATRPARSPGPTSPLTFSS 342
           G+PG T P  +PGPT+P  F+S
Sbjct: 8   GAPGPTAPP-APGPTAPPAFAS 28

to top

>SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member (AtSwi3C)
          Length = 985

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 30/107 (28%), Positives = 41/107 (38%)
 Frame = +3

Query: 9   PSRRRQPTIEAAMVSAEYSIDLKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQA 188
           P    + T E         ++  + E  K       +L+A  EA + VG          +
Sbjct: 481 PGDASEETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGH--------SS 532

Query: 189 APEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVAS 329
            PEA+  F  DLG     LA       +VRLAGS  A A  R  + S
Sbjct: 533 TPEASFSFA-DLGNPVMGLAAF-----LVRLAGSDVATASARASIKS 573

to top

>SFSA_PYRFU (Q8U1K8) Sugar fermentation stimulation protein homolog|
          Length = 230

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 69  DLKLSELLKQARPSATSLRAAGEATDAVGELI 164
           D K++ELLK+A  +   +RA G   +  GE+I
Sbjct: 190 DPKIAELLKEALEAGVEIRALGLHMELSGEII 221

to top

>PDE2_CAEEL (P30645) Probable 3',5'-cyclic phosphodiesterase pde-2 (EC|
           3.1.4.17)
          Length = 859

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 14/42 (33%)
 Frame = -2

Query: 256 KENASFSAARPRSLTN--------------PEAASGAACCGG 173
           + N+S S+A P   TN               EAASG+ CCGG
Sbjct: 5   RRNSSPSSAHPSPQTNCQNSQRGDGLHHHHHEAASGSTCCGG 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,379,749
Number of Sequences: 219361
Number of extensions: 712725
Number of successful extensions: 4257
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 3388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4246
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result