>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
           insert sequence
          Length = 4125

 Score =  153 bits (77), Expect = 5e-34
 Identities = 259/319 (81%), Gaps = 3/319 (0%)
 Strand = Plus / Plus

                                                                       
Query: 61  actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 120
           ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 117 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 176

                                                                       
Query: 121 tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 180
           ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 177 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 236

                                                                       
Query: 181 agcaggcagcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 240
           |||||||  | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 237 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 296

                                                                       
Query: 241 agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 298
           |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 297 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 356

                                                                       
Query: 299 -cggcgcggtcaccaggcccgacgtcgcctctgaccttctcgtccgcttgcctaaggaat 357
            |||||| ||| | |||||||||||| || ||||||| ||||| ||||||||||||||||
Sbjct: 357 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaaggaat 416

                              
Query: 358 gttttcatgaaaaggattt 376
           | || |||||||| |||||
Sbjct: 417 gcttccatgaaaaagattt 435

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  133 bits (67), Expect = 5e-28
 Identities = 240/297 (80%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                           
Query: 61      actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 120
               ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 3359797 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 3359856

                                                                           
Query: 121     tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 180
               ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 3359857 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 3359916

                                                                           
Query: 181     agcaggcagcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 240
               |||||||  | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 3359917 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 3359976

                                                                           
Query: 241     agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 298
               |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 3359977 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 3360036

                                                                        
Query: 299     -cggcgcggtcaccaggcccgacgtcgcctctgaccttctcgtccgcttgcctaagg 354
                |||||| ||| | |||||||||||| || ||||||| ||||| |||||||||||||
Sbjct: 3360037 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaagg 3360093

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  133 bits (67), Expect = 5e-28
 Identities = 240/297 (80%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                           
Query: 61      actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 120
               ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 3359742 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 3359801

                                                                           
Query: 121     tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 180
               ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 3359802 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 3359861

                                                                           
Query: 181     agcaggcagcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 240
               |||||||  | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 3359862 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 3359921

                                                                           
Query: 241     agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 298
               |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 3359922 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 3359981

                                                                        
Query: 299     -cggcgcggtcaccaggcccgacgtcgcctctgaccttctcgtccgcttgcctaagg 354
                |||||| ||| | |||||||||||| || ||||||| ||||| |||||||||||||
Sbjct: 3359982 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaagg 3360038

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score =  133 bits (67), Expect = 5e-28
 Identities = 240/297 (80%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                         
Query: 61    actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 120
             ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 38850 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 38909

                                                                         
Query: 121   tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 180
             ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 38910 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 38969

                                                                         
Query: 181   agcaggcagcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 240
             |||||||  | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 38970 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 39029

                                                                         
Query: 241   agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 298
             |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 39030 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 39089

                                                                      
Query: 299   -cggcgcggtcaccaggcccgacgtcgcctctgaccttctcgtccgcttgcctaagg 354
              |||||| ||| | |||||||||||| || ||||||| ||||| |||||||||||||
Sbjct: 39090 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaagg 39146

>gb|AY573970.1| Oryza sativa (japonica cultivar-group) clone Tel FR4
           telomere-associated sequence
          Length = 219

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 61  actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 120
           ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 109 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 50

                     
Query: 121 tccgcgccgc 130
           ||||||||||
Sbjct: 49  tccgcgccgc 40

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 266    ggaggtggtgcggctcgccggg 287
              ||||||||||||||||||||||
Sbjct: 220847 ggaggtggtgcggctcgccggg 220868

>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence
          Length = 53591

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 271   tggtgcggctcgccgggagccacgc 295
             ||||||||||| |||||||||||||
Sbjct: 25330 tggtgcggctcaccgggagccacgc 25354

>gb|AE010421.1| Methanopyrus kandleri AV19 section 120 of 157 of the complete genome
          Length = 12174

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 134   ggaggccaccgacgccgtcgggga 157
             |||||||| |||||||||||||||
Sbjct: 11083 ggaggccagcgacgccgtcgggga 11106

>ref|XM_475108.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 ccgacgccgtcggggagctc 161
           ||||||||||||||||||||
Sbjct: 561 ccgacgccgtcggggagctc 542

>ref|XM_476719.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2457

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  ggccgccggaggtggtgcgg 278
            ||||||||||||||||||||
Sbjct: 2141 ggccgccggaggtggtgcgg 2160

>gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, complete sequence
          Length = 173430

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    cgcaatggtctccgccgagt 60
             ||||||||||||||||||||
Sbjct: 82072 cgcaatggtctccgccgagt 82091

>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
             complete sequence
          Length = 148373

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   ccgacgccgtcggggagctc 161
             ||||||||||||||||||||
Sbjct: 47351 ccgacgccgtcggggagctc 47332

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 29      gaccatcgaagccgcaatggtctc 52
               |||||||||||||||| |||||||
Sbjct: 4204814 gaccatcgaagccgcagtggtctc 4204791

>gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosome 7, complete sequence
          Length = 183918

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 343   gcttgcctaaggaatgttttcatg 366
             |||||||||| |||||||||||||
Sbjct: 74514 gcttgcctaaagaatgttttcatg 74537

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 292    acgcggccggcgcggtcaccaggcccga 319
              ||||||||||||||| |||||| |||||
Sbjct: 462908 acgcggccggcgcggccaccagccccga 462935

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      cgagctcctcaagcaagcgc 102
               ||||||||||||||||||||
Sbjct: 1132109 cgagctcctcaagcaagcgc 1132090

>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ccgacgccgtcggggagctc 161
             ||||||||||||||||||||
Sbjct: 70411 ccgacgccgtcggggagctc 70430

>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 125    cgccgccggggaggccaccgacgccgtc 152
              ||||| ||| ||||||||||||||||||
Sbjct: 126207 cgccgacggcgaggccaccgacgccgtc 126234

>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   ccgacgccgtcggggagctc 161
             ||||||||||||||||||||
Sbjct: 61259 ccgacgccgtcggggagctc 61240

>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence
          Length = 144359

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   ccgacgccgtcggggagctc 161
             ||||||||||||||||||||
Sbjct: 45486 ccgacgccgtcggggagctc 45467

>gb|AC009470.4| Homo sapiens BAC clone RP11-125K7 from 11, complete sequence
          Length = 162511

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 284   cgggagccacgcggccggcgcggt 307
             |||||||| |||||||||||||||
Sbjct: 25639 cgggagccgcgcggccggcgcggt 25616

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 13      cccgccgccggcaaccgacc 32
               ||||||||||||||||||||
Sbjct: 3241434 cccgccgccggcaaccgacc 3241415

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 142      ccgacgccgtcggggagctc 161
                ||||||||||||||||||||
Sbjct: 19915603 ccgacgccgtcggggagctc 19915622

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     ccgacgccgtcggggagctc 161
               ||||||||||||||||||||
Sbjct: 3612645 ccgacgccgtcggggagctc 3612626

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 259     ggccgccggaggtggtgcgg 278
               ||||||||||||||||||||
Sbjct: 3518631 ggccgccggaggtggtgcgg 3518612

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      ccgacgccgtcggggagctc 161
                ||||||||||||||||||||
Sbjct: 17053984 ccgacgccgtcggggagctc 17053965

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     ccggcgcggtcaccaggccc 317
               ||||||||||||||||||||
Sbjct: 2770853 ccggcgcggtcaccaggccc 2770872

>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 109   gcgccacctctctccgcgccgccggggaggcc 140
             |||||||||| |||| ||||||||||||||||
Sbjct: 10012 gcgccacctc-ctccacgccgccggggaggcc 9982

>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0039H02
          Length = 169162

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   ggccgccggaggtggtgcgg 278
             ||||||||||||||||||||
Sbjct: 56581 ggccgccggaggtggtgcgg 56562

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 281     cgccgggagccacgcggccggcgc 304
               ||||||||||||||||| ||||||
Sbjct: 2628035 cgccgggagccacgcggtcggcgc 2628058

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     ccgacgccgtcggggagctc 161
               ||||||||||||||||||||
Sbjct: 3612566 ccgacgccgtcggggagctc 3612547

>gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, complete sequence
          Length = 215518

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 343   gcttgcctaaggaatgttttcatg 366
             |||||||||| |||||||||||||
Sbjct: 81119 gcttgcctaaagaatgttttcatg 81096

>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete
              sequence
          Length = 175872

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 284    cgggagccacgcggccggcgcggt 307
              |||||||| |||||||||||||||
Sbjct: 117751 cgggagccgcgcggccggcgcggt 117728


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,371,329
Number of Sequences: 3902068
Number of extensions: 2371329
Number of successful extensions: 47508
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46772
Number of HSP's gapped (non-prelim): 733
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)