Clone Name | bastl13g05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane pro... | 177 | 7e-45 | 2 | AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane pro... | 138 | 4e-33 | 3 | AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane pr... | 132 | 2e-31 | 4 | HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.... | 30 | 1.8 | 5 | HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.... | 30 | 1.8 |
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>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 177 bits (448), Expect = 7e-45 Identities = 88/99 (88%), Positives = 89/99 (89%) Frame = +2 Query: 101 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXENGYGDYLIEEEE 280 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTP +NGYGDYLIEEEE Sbjct: 1 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASAAAGAKNGYGDYLIEEEE 60 Query: 281 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMGV 397 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFM V Sbjct: 61 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVV 99
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 138 bits (347), Expect = 4e-33 Identities = 69/97 (71%), Positives = 78/97 (80%), Gaps = 1/97 (1%) Frame = +2 Query: 104 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXX-XXXXENGYGDYLIEEEE 280 AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++ +NGY DYLIEEEE Sbjct: 3 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEE 62 Query: 281 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFM 391 G+NDHNVVVKCAEIQ AISEGATSFLFT Y+YVG+FM Sbjct: 63 GINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFM 99
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 132 bits (333), Expect = 2e-31 Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 4/104 (3%) Frame = +2 Query: 92 LTAMAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXX----ENGYGD 259 + A A+L EL TEIL+P+C VIGI F++ QW++VS+VK+T +NGYGD Sbjct: 1 MVAPALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGD 60 Query: 260 YLIEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFM 391 YLIEEEEG+ND +VV KCAEIQTAISEGATSFLFT Y+YVG+FM Sbjct: 61 YLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFM 104
>HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 308 KCAEIQTAISEGATSFLFTMYQYVGMFM 391 K EI +AISEGA +FL Y+ + +F+ Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFI 69
>HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 308 KCAEIQTAISEGATSFLFTMYQYVGMFM 391 K EI +AISEGA +FL Y+ + +F+ Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFI 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,615,454 Number of Sequences: 219361 Number of extensions: 326459 Number of successful extensions: 1101 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1099 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)