ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13g04 |
|---|---|
| Clone Library Name | barley_pub |
>MAUG_METME (Q50233) Methylamine utilization protein mauG precursor| Length = 335 Score = 31.6 bits (70), Expect = 0.51 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +1 Query: 40 LPAALSLLTHAFNTVHLQQLVAD*PWDWEGSIHGV 144 +P+ ++L+ HAF T L+ L D P+ +GSI G+ Sbjct: 246 VPSQVTLMQHAFKTPSLRDLSIDGPYMHDGSIRGL 280
>NIA_LOTJA (P39869) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 900 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 181 HGAQQQPPSPALPHHGWILPSP 116 H +PP P L HHG+I P P Sbjct: 99 HPFNSEPPLPRLMHHGFITPVP 120
>NIA2_SOYBN (P39870) Inducible nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR)| Length = 890 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 181 HGAQQQPPSPALPHHGWILPSP 116 H +PP P L HHG+I P P Sbjct: 96 HPFNSEPPLPRLMHHGFITPVP 117
>NIA2_BRANA (P39868) Nitrate reductase [NADH], clone PBNBR1412 (EC 1.7.1.1)| (NR) Length = 911 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 181 HGAQQQPPSPALPHHGWILPSP 116 H +PP P L HHG+I P P Sbjct: 118 HPFNAEPPLPRLMHHGFITPVP 139
>NOL11_BRARE (Q4V9P9) Nucleolar protein 11-like| Length = 708 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = -1 Query: 285 NTADADVE---MRGGALVKLRETSPXXXXXXAPEQRSTTALSSSRRPQLFHTMDGSFPV 118 +T D+++E + +L+ ++E SP EQ++ +SSS++ + F +MD PV Sbjct: 512 STPDSEMETLTLDTESLIIMKEMSPAQSQMEEGEQQNENGVSSSKQQRDFLSMDMKCPV 570
>NIA1_PHAVU (P39865) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1)| Length = 881 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 181 HGAQQQPPSPALPHHGWILPSP 116 H +PP P L HG+I PSP Sbjct: 94 HPFNAEPPLPRLMQHGFITPSP 115
>ADRB1_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) (Beta-T) Length = 483 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 181 HGAQQQPPSPALPHHGWILPSPRVSQ 104 +G+Q+QP P LP H IL + R S+ Sbjct: 249 YGSQEQPQPPPLPQHQPILGNGRASK 274
>NIA1_SOYBN (P54233) Inducible nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR)| Length = 886 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 181 HGAQQQPPSPALPHHGWILPSP 116 H + P P L HHG+I PSP Sbjct: 92 HPFNGEGPLPRLMHHGFITPSP 113
>NFYA9_ARATH (Q945M9) Nuclear transcription factor Y subunit A-9 (AtNF-YA-9)| Length = 303 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%) Frame = -3 Query: 184 HHGAQQQPPSPALPHH--GWILPSP 116 HHG Q PP P L H GW +P Sbjct: 102 HHGITQPPPHPQLVGHTVGWASSNP 126
>POL1_GCMV (P13025) RNA1 polyprotein (P1) [Contains: P1A protein (1A)| (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.1.-) (NTP-binding protein) (NTB) (1B) (Membrane-binding protein); Viral genome-linked protein (1C-VPg); Picornain 3C-like pr Length = 2252 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -2 Query: 116 QGQSATSCCRCTVLNACVRRERAAGSGQ 33 QGQS +CCR T A VRRE A S + Sbjct: 111 QGQSLLACCRTT---AEVRREAAEASAE 135
>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 2158 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 178 GAQQQPPSPALPHHGWILPSP 116 GA + PP+PALP G PSP Sbjct: 2017 GASEGPPAPALPCPGAPTPSP 2037
>MBTP1_RAT (Q9WTZ3) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin isozyme 1) (SKI-1) Length = 1052 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -3 Query: 190 EEHHGAQQQPPSPALPHHGWILPSP 116 E H G + P PA PH W P P Sbjct: 913 EAHLGDPKPRPLPACPHLSWAKPQP 937
>MBTP1_MOUSE (Q9WTZ2) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin isozyme 1) (SKI-1) (Sterol-regulated luminal protease) Length = 1052 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -3 Query: 190 EEHHGAQQQPPSPALPHHGWILPSP 116 E H G + P PA PH W P P Sbjct: 913 EAHLGDPKPRPLPACPHLSWAKPQP 937
>MBTP1_CRIGR (Q9Z2A8) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin-isozyme 1) (SKI-1) (Sterol-regulated luminal protease) Length = 1052 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -3 Query: 190 EEHHGAQQQPPSPALPHHGWILPSP 116 E H G + P PA PH W P P Sbjct: 913 EAHLGDPKPRPLPACPHLSWAKPQP 937 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,289,929 Number of Sequences: 219361 Number of extensions: 654578 Number of successful extensions: 2459 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2360 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2456 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
