ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PANK1_MOUSE (Q8K4K6) Pantothenate kinase 1 (EC 2.7.1.33) (Pantot... 28 6.9
2YCCR_ECOLI (P75869) Hypothetical protein yccR 27 9.0

>PANK1_MOUSE (Q8K4K6) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid|
           kinase 1) (mPank1) (mPank)
          Length = 548

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 330 LRWQKLWASHQKPGRSCRRHRRWGVGEK 247
           L+ Q L+A H  P + CR  RR   G K
Sbjct: 154 LQPQPLFAQHDSPAKKCRLRRRMDSGRK 181



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>YCCR_ECOLI (P75869) Hypothetical protein yccR|
          Length = 209

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 384 VSSSECYANQTKYAARYLLRWQKLWASHQKPGRS 283
           VS  E Y    + +A+Y ++   +W +++K GRS
Sbjct: 43  VSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRS 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,624,782
Number of Sequences: 219361
Number of extensions: 447618
Number of successful extensions: 1068
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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