ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470718.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
2dbj|AK066201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.001
4gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom... 52 0.001
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
6ref|XM_470721.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.022
7ref|XM_481597.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
8gb|DQ213789.1| Taeniopygia guttata clone 0063P0027B04 mRNA sequence 42 1.3
9ref|NM_192558.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
10emb|BX067836.1|CNS09OI8 Single read from an extremity of a full-... 42 1.3
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
13dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
15dbj|AK119582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
16ref|XM_320939.2| Anopheles gambiae str. PEST ENSANGP00000017588 ... 42 1.3
17dbj|AK072399.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
18dbj|AK069839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
19gb|AC006141.2|AC006141 Homo sapiens chromosome 17, clone hRPK.42... 42 1.3
20emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chr... 42 1.3
21ref|XM_480259.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
22ref|XM_475285.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
23ref|XM_513885.1| PREDICTED: Pan troglodytes LOC457395 (LOC457395... 40 5.3
24gb|AY530876.1| Simian adenovirus 22 strain ATCC VR-591, complete... 40 5.3
25gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
26gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
27gb|AC134440.3| Mus musculus BAC clone RP24-528L1 from chromosome... 40 5.3
28emb|BX901899.9| Zebrafish DNA sequence from clone DKEY-255N6 in ... 40 5.3
29gb|BC085956.1| Rattus norvegicus zinc finger, AN1-type domain 3,... 40 5.3
30ref|NM_001012175.1| Rattus norvegicus zinc finger, AN1-type doma... 40 5.3
31emb|CR392362.23| Zebrafish DNA sequence from clone DKEY-5B19 in ... 40 5.3
32emb|AL353638.15| Human DNA sequence from clone RP11-338L20 on ch... 40 5.3
33emb|AL139130.28| Human DNA sequence from clone RP11-139I14 on ch... 40 5.3
34gb|AC097061.2| Homo sapiens chromosome 1 clone RP11-415L24, comp... 40 5.3
35dbj|AK148316.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len... 40 5.3
36gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome... 40 5.3
37dbj|AK082915.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 5.3
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
39emb|BX664629.10| Zebrafish DNA sequence from clone DKEY-30G10 in... 40 5.3
40dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
41emb|BX569795.5| Zebrafish DNA sequence from clone CH211-206A19 i... 40 5.3
42gb|BC083124.1| Mus musculus zinc finger, AN1-type domain 3, mRNA... 40 5.3
43gb|BC034396.1| Mus musculus zinc finger, AN1-type domain 3, mRNA... 40 5.3
44ref|NM_148926.2| Mus musculus zinc finger, AN1-type domain 3 (Zf... 40 5.3
45gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 5.3
46gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, comple... 40 5.3

>ref|XM_470718.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2044

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 285 tccgcccgggtttctggtgagatgcccaaagcttttgccatcttagaagatat 337
           |||||||||| | | ||||||| |||||||||||||| |||| ||||||||||
Sbjct: 202 tccgcccgggctaccggtgagacgcccaaagcttttggcatcctagaagatat 254



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>dbj|AK066201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K22, full
           insert sequence
          Length = 4060

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 285 tccgcccgggtttctggtgagatgcccaaagcttttgccatcttagaagatat 337
           |||||||||| | | ||||||| |||||||||||||| |||| ||||||||||
Sbjct: 262 tccgcccgggctaccggtgagacgcccaaagcttttggcatcctagaagatat 314



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 300      ggtgagatgcccaaagcttttgccatcttagaagatat 337
                ||||||| |||||||||||||| |||| ||||||||||
Sbjct: 14738675 ggtgagacgcccaaagcttttggcatcctagaagatat 14738712



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                            
Query: 304      agatgcccaaagcttttgccatcttagaagatatcgtgcagcatactttgtctgatttgc 363
                |||||||||||||||||| |||| || ||||| | | ||| || ||| ||||| ||||||
Sbjct: 14754439 agatgcccaaagcttttgacatcctacaagatgttgcgcaacacactctgtctaatttgc 14754498

                                    
Query: 364      atagcattcagaagagctta 383
                ||   || ||||||||||||
Sbjct: 14754499 atgatatccagaagagctta 14754518



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>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
             sequence
          Length = 130306

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 300   ggtgagatgcccaaagcttttgccatcttagaagatat 337
             ||||||| |||||||||||||| |||| ||||||||||
Sbjct: 77587 ggtgagacgcccaaagcttttggcatcctagaagatat 77624



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                         
Query: 304   agatgcccaaagcttttgccatcttagaagatatcgtgcagcatactttgtctgatttgc 363
             |||||||||||||||||| |||| || ||||| | | ||| || ||| ||||| ||||||
Sbjct: 93351 agatgcccaaagcttttgacatcctacaagatgttgcgcaacacactctgtctaatttgc 93410

                                 
Query: 364   atagcattcagaagagctta 383
             ||   || ||||||||||||
Sbjct: 93411 atgatatccagaagagctta 93430



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 300      ggtgagatgcccaaagcttttgccatcttagaagatat 337
                ||||||| |||||||||||||| |||| ||||||||||
Sbjct: 14733209 ggtgagacgcccaaagcttttggcatcctagaagatat 14733246



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                            
Query: 304      agatgcccaaagcttttgccatcttagaagatatcgtgcagcatactttgtctgatttgc 363
                |||||||||||||||||| |||| || ||||| | | ||| || ||| ||||| ||||||
Sbjct: 14748973 agatgcccaaagcttttgacatcctacaagatgttgcgcaacacactctgtctaatttgc 14749032

                                    
Query: 364      atagcattcagaagagctta 383
                ||   || ||||||||||||
Sbjct: 14749033 atgatatccagaagagctta 14749052



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>ref|XM_470721.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2023

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 304 agatgcccaaagcttttgccatcttagaagatatcgtgcagcatactttgtctgatttgc 363
           |||||||||||||||||| |||| || ||||| | | ||| || ||| ||||| ||||||
Sbjct: 86  agatgcccaaagcttttgacatcctacaagatgttgcgcaacacactctgtctaatttgc 145

                               
Query: 364 atagcattcagaagagctta 383
           ||   || ||||||||||||
Sbjct: 146 atgatatccagaagagctta 165



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>ref|XM_481597.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2273

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 179 agccgccgcctccgagctcctccgccgcc 207
           |||||||||| |||| |||||||||||||
Sbjct: 278 agccgccgccgccgacctcctccgccgcc 306



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>gb|DQ213789.1| Taeniopygia guttata clone 0063P0027B04 mRNA sequence
          Length = 1362

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 183 gccgcctccgagctcctccgccgcc 207
           |||||||||||||||| ||||||||
Sbjct: 84  gccgcctccgagctccgccgccgcc 60



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>ref|NM_192558.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 180 gccgccgcctccgagctcctccgccgcct 208
           |||||||||||||  ||||||||||||||
Sbjct: 22  gccgccgcctccgccctcctccgccgcct 50



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>emb|BX067836.1|CNS09OI8 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC51CG04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 962

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  acctcgctgtcgccgccgctc 108
           |||||||||||||||||||||
Sbjct: 791 acctcgctgtcgccgccgctc 811



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 179      agccgccgcctccgagctcctccgccgcc 207
                |||||||||| |||| |||||||||||||
Sbjct: 14074950 agccgccgccgccgacctcctccgccgcc 14074922



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 180     gccgccgcctccgagctcctccgccgcc 207
               ||||||||| ||||||||||||||||||
Sbjct: 3939981 gccgccgcc-ccgagctcctccgccgcc 3940007



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 180      gccgccgcctccgagctcctccgccgcct 208
                |||||||||||||  ||||||||||||||
Sbjct: 22944324 gccgccgcctccgccctcctccgccgcct 22944352



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>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415C01
          Length = 138701

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 180   gccgccgcctccgagctcctccgccgcct 208
             |||||||||||||  ||||||||||||||
Sbjct: 14730 gccgccgcctccgccctcctccgccgcct 14758



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>dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0048E12
          Length = 152543

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 179    agccgccgcctccgagctcctccgccgcc 207
              |||||||||| |||| |||||||||||||
Sbjct: 106841 agccgccgccgccgacctcctccgccgcc 106813



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>dbj|AK119582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-C04, full
           insert sequence
          Length = 2022

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 179 agccgccgcctccgagctcctccgccgcc 207
           |||||||||| |||| |||||||||||||
Sbjct: 33  agccgccgccgccgacctcctccgccgcc 61



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>ref|XM_320939.2| Anopheles gambiae str. PEST ENSANGP00000017588 (ENSANGG00000015099),
            partial mRNA
          Length = 3838

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 88   acctcgctgtcgccgccgctc 108
            |||||||||||||||||||||
Sbjct: 3270 acctcgctgtcgccgccgctc 3250



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>dbj|AK072399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H11, full
           insert sequence
          Length = 2147

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 180 gccgccgcctccgagctcctccgccgcct 208
           |||||||||||||  ||||||||||||||
Sbjct: 52  gccgccgcctccgccctcctccgccgcct 80



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>dbj|AK069839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031A12, full
           insert sequence
          Length = 2273

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 179 agccgccgcctccgagctcctccgccgcc 207
           |||||||||| |||| |||||||||||||
Sbjct: 277 agccgccgccgccgacctcctccgccgcc 305



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>gb|AC006141.2|AC006141 Homo sapiens chromosome 17, clone hRPK.421_E_14, complete sequence
          Length = 121132

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   cttctctcccactccccatct 267
             |||||||||||||||||||||
Sbjct: 87649 cttctctcccactccccatct 87629



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>emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chromosome 2, complete
              sequence
          Length = 203518

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 292    gggtttctggtgagatgccca 312
              |||||||||||||||||||||
Sbjct: 102281 gggtttctggtgagatgccca 102301



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>ref|XM_480259.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1965

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           ||||||||| ||||||||||||||||||
Sbjct: 161 gccgccgcc-ccgagctcctccgccgcc 135



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>ref|XM_475285.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  cgctgtcgccgccgctccgg 111
           ||||||||||||||||||||
Sbjct: 441 cgctgtcgccgccgctccgg 460



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>ref|XM_513885.1| PREDICTED: Pan troglodytes LOC457395 (LOC457395), mRNA
          Length = 2024

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 tcctcctagccgccgcctcc 191
           ||||||||||||||||||||
Sbjct: 685 tcctcctagccgccgcctcc 666



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>gb|AY530876.1| Simian adenovirus 22 strain ATCC VR-591, complete genome
          Length = 36462

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tcgctgtcgccgccgctccg 110
             ||||||||||||||||||||
Sbjct: 33797 tcgctgtcgccgccgctccg 33816



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>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04,
             complete sequence
          Length = 103458

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    cgctgtcgccgccgctccgg 111
             ||||||||||||||||||||
Sbjct: 99210 cgctgtcgccgccgctccgg 99191



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>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07,
             complete sequence
          Length = 106166

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    cgctgtcgccgccgctccgg 111
             ||||||||||||||||||||
Sbjct: 62697 cgctgtcgccgccgctccgg 62678



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>gb|AC134440.3| Mus musculus BAC clone RP24-528L1 from chromosome 18, complete sequence
          Length = 152907

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ttctctcccactccccatct 267
             ||||||||||||||||||||
Sbjct: 80336 ttctctcccactccccatct 80355



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>emb|BX901899.9| Zebrafish DNA sequence from clone DKEY-255N6 in linkage group 16,
             complete sequence
          Length = 127034

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   gccgcctcttggtggtccgc 221
             ||||||||||||||||||||
Sbjct: 51792 gccgcctcttggtggtccgc 51773



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>gb|BC085956.1| Rattus norvegicus zinc finger, AN1-type domain 3, mRNA (cDNA clone
           MGC:95308 IMAGE:7134959), complete cds
          Length = 2617

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 84  gccgtcgcctccgagctccgccgccgcc 111



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>ref|NM_001012175.1| Rattus norvegicus zinc finger, AN1-type domain 3 (Zfand3), mRNA
          Length = 2617

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 84  gccgtcgcctccgagctccgccgccgcc 111



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>emb|CR392362.23| Zebrafish DNA sequence from clone DKEY-5B19 in linkage group 8,
             complete sequence
          Length = 114516

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   tcagaagagcttactttattggaa 394
             ||||||||| ||||||||||||||
Sbjct: 57110 tcagaagagtttactttattggaa 57087



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>emb|AL353638.15| Human DNA sequence from clone RP11-338L20 on chromosome 9 Contains a
             ribosomal protein S26 pseudogene 3 and part the 5' UTR of
             the PTPRD gene for protein tyrosine phosphatase, receptor
             type, D (HPTP, PTPD, HPTPD), complete sequence
          Length = 161067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ttgccatcttagaagatatc 338
             ||||||||||||||||||||
Sbjct: 64621 ttgccatcttagaagatatc 64640



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>emb|AL139130.28| Human DNA sequence from clone RP11-139I14 on chromosome 1 Contains the
             3' end of the RHBG gene for Rhesus blood group B
             glycoprotein, a novel gene, the gene for transcriptional
             activator of the c-fos promoter (CROC4) and two CpG
             islands, complete sequence
          Length = 61145

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   tcctcctagccgccgcctcc 191
             ||||||||||||||||||||
Sbjct: 56034 tcctcctagccgccgcctcc 56053



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>gb|AC097061.2| Homo sapiens chromosome 1 clone RP11-415L24, complete sequence
          Length = 165311

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    cagcatactttgtctgattt 361
              ||||||||||||||||||||
Sbjct: 111758 cagcatactttgtctgattt 111777



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>dbj|AK148316.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched
           library, clone:G370087H04 product:testis expressed gene
           27, full insert sequence
          Length = 3450

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 115 gccgtcgcctccgagctccgccgccgcc 142



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>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence
          Length = 206868

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 180    gccgccgcctccgagctcctccgccgcc 207
              |||| |||||||||||||| ||||||||
Sbjct: 199697 gccgtcgcctccgagctccgccgccgcc 199724



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>dbj|AK082915.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430017I01 product:testis
           expressed gene 27, full insert sequence
          Length = 2567

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 148 gccgtcgcctccgagctccgccgccgcc 175



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 92       cgctgtcgccgccgctccgg 111
                ||||||||||||||||||||
Sbjct: 21083832 cgctgtcgccgccgctccgg 21083813



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>emb|BX664629.10| Zebrafish DNA sequence from clone DKEY-30G10 in linkage group 22,
              complete sequence
          Length = 256437

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 371    tcagaagagcttactttattggaa 394
              ||||||||| ||||||||||||||
Sbjct: 227940 tcagaagagtttactttattggaa 227963



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>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0462E11
          Length = 166115

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 180   gccgccgcctccgagctcctccgccgcc 207
             ||||||||| ||||||||||||||||||
Sbjct: 27278 gccgccgcc-ccgagctcctccgccgcc 27304



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>emb|BX569795.5| Zebrafish DNA sequence from clone CH211-206A19 in linkage group 22,
             complete sequence
          Length = 162622

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   tcagaagagcttactttattggaa 394
             ||||||||| ||||||||||||||
Sbjct: 81113 tcagaagagtttactttattggaa 81090



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>gb|BC083124.1| Mus musculus zinc finger, AN1-type domain 3, mRNA (cDNA clone
           MGC:103362 IMAGE:6334368), complete cds
          Length = 2664

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 111 gccgtcgcctccgagctccgccgccgcc 138



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>gb|BC034396.1| Mus musculus zinc finger, AN1-type domain 3, mRNA (cDNA clone
           MGC:36268 IMAGE:3707476), complete cds
          Length = 2560

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 31  gccgtcgcctccgagctccgccgccgcc 58



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>ref|NM_148926.2| Mus musculus zinc finger, AN1-type domain 3 (Zfand3), mRNA
          Length = 2664

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 180 gccgccgcctccgagctcctccgccgcc 207
           |||| |||||||||||||| ||||||||
Sbjct: 111 gccgtcgcctccgagctccgccgccgcc 138



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 131     gaactccctcatcgcccgcc 150
               ||||||||||||||||||||
Sbjct: 6123255 gaactccctcatcgcccgcc 6123274



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>gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, complete sequence
          Length = 225031

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 180    gccgccgcctccgagctcctccgccgcc 207
              |||| |||||||||||||| ||||||||
Sbjct: 173043 gccgtcgcctccgagctccgccgccgcc 173016


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,649,003
Number of Sequences: 3902068
Number of extensions: 2649003
Number of successful extensions: 57941
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 57517
Number of HSP's gapped (non-prelim): 428
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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