>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34|
           (eIF-(iso)4F p82-34)
          Length = 788

 Score =  117 bits (292), Expect = 9e-27
 Identities = 60/76 (78%), Positives = 62/76 (81%)
 Frame = +3

Query: 147 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 326
           MTTDQPVISL             LFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLH E+
Sbjct: 1   MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHSES 60

Query: 327 RERIRYSRDQLLDLRK 374
           RER+RYSRDQLLDLRK
Sbjct: 61  RERVRYSRDQLLDLRK 76

>CEA_CITFR (P04480) Colicin-A|
          Length = 592

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 166 TGWSVVMAEGPEPDQGTAAARSTGNRRGAGEEIAEES 56
           TGWS     GPEP  G +   S G+ RG    +  ES
Sbjct: 13  TGWSSERGSGPEPG-GGSHGNSGGHDRGDSSNVGNES 48

>KPCG_BOVIN (P05128) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)|
           (Fragment)
          Length = 682

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 138 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 22
           +P+P+ +P    R   G +PGR       F FL++LG+G
Sbjct: 309 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 345

>KPCG_RAT (P63319) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)|
          Length = 697

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 138 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 22
           +P+P+ +P    R   G +PGR       F FL++LG+G
Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360

>KPCG_RABIT (P10829) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)|
           (PKC-delta)
          Length = 697

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 138 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 22
           +P+P+ +P    R   G +PGR       F FL++LG+G
Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360

>KPCG_MOUSE (P63318) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)|
          Length = 697

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 138 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 22
           +P+P+ +P    R   G +PGR       F FL++LG+G
Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360

>PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a (OsPIN3a)|
          Length = 618

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 165 LAGLSSWLRVPNPTKAPR 112
           LAGL++W R+P+ T APR
Sbjct: 83  LAGLAAWSRLPSRTGAPR 100

>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix|
           nude)
          Length = 648

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 225 PAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 326
           P      SG+GD   P  GG+     +GDLH  T
Sbjct: 585 PCLTETGSGAGDLAAPGSGGSGA---LGDLHLTT 615

>KPCG_HUMAN (P05129) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)|
          Length = 697

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 138 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 22
           +P+P+ +P    R   G +PGR       F FL++LG+G
Sbjct: 324 IPSPSPSPTDPKRCFFGASPGR--LHISDFSFLMVLGKG 360

>CNTRB_HUMAN (Q8N137) Centrobin (LYST-interacting protein 8)|
          Length = 903

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 65  RDFLPGAPPIPCRSS 109
           RD LPGAPP+ C SS
Sbjct: 620 RDELPGAPPVLCSSS 634

>RLPA_PSEAE (Q9X6V6) RlpA-like lipoprotein precursor|
          Length = 342

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
 Frame = +3

Query: 225 PAFAVAASGSGDFLRPHGGGAS----GVSRIGD 311
           PA     SG GD+ RPH  GA      VSRI D
Sbjct: 35  PARQAGISGPGDYSRPHRDGAPWWDVDVSRIPD 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,654,609
Number of Sequences: 219361
Number of extensions: 612495
Number of successful extensions: 2236
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2236
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)