Clone Information

BLAST Search Result

Clone Name	bastl13f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IF2_BORPE (Q7VYR2) Translation initiation factor IF-2	31	0.84
2	IF2_BORBR (Q7WHG2) Translation initiation factor IF-2	31	0.84
3	S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute car...	31	0.84
4	IE63_EBV (Q04360) Transcriptional regulator IE63 homolog (Diffus...	30	1.1
5	EWS_MOUSE (Q61545) RNA-binding protein EWS	30	1.1
6	CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel al...	30	1.4
7	MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS) ...	30	1.9
8	PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)	29	2.4
9	SYD_PROMA (Q7V9I1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar...	29	2.4
10	CAD22_RAT (Q63315) Cadherin-22 precursor (Pituitary and brain ca...	29	2.4
11	CAD22_MOUSE (Q9WTP5) Cadherin-22 precursor (Pituitary and brain ...	29	2.4
12	SYN3_RAT (O70441) Synapsin-3 (Synapsin III)	29	2.4
13	SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)	29	2.4
14	CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displace...	25	2.4
15	Y525_PSEAE (Q51484) Hypothetical protein PA0525	26	2.5
16	SYGP1_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synap...	29	3.2
17	CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5...	29	3.2
18	ANMX_CRILO (Q99MI9) Protein arginine N-methyltransferase (EC 2.1...	29	3.2
19	DNAK_NATPD (Q3IUI0) Chaperone protein dnaK (Heat shock protein 7...	29	3.2
20	ANM7_MOUSE (Q922X9) Protein arginine N-methyltransferase 7 (EC 2...	29	3.2
21	JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylatio...	29	3.2
22	IF2_CORDI (Q6NGN2) Translation initiation factor IF-2	28	4.2
23	PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC)	28	4.2
24	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	28	4.2
25	TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Pr...	28	4.2
26	TM16B_HUMAN (Q9NQ90) Transmembrane protein 16B	28	4.2
27	MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substra...	28	4.2
28	DNAE2_RHILO (Q98E34) Error-prone DNA polymerase (EC 2.7.7.7)	28	4.2
29	TPR_HUMAN (P12270) Nucleoprotein TPR	28	5.4
30	GSK3A_RAT (P18265) Glycogen synthase kinase-3 alpha (EC 2.7.11.2...	28	5.4
31	VE4_HPV57 (P22157) Probable protein E4	28	5.4
32	MYCN_CHICK (P18444) N-myc proto-oncogene protein	28	5.4
33	SYE_SYMTH (Q67TJ2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...	28	5.4
34	GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein	28	5.4
35	SPAG1_HUMAN (Q07617) Sperm-associated antigen 1 (Infertility-rel...	28	7.1
36	S39A5_MOUSE (Q9D856) Zinc transporter ZIP5 precursor (Solute car...	28	7.1
37	GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11...	28	7.1
38	ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disint...	28	7.1
39	IF2_VIBF1 (Q5E7L5) Translation initiation factor IF-2	28	7.1
40	ANM7_HUMAN (Q9NVM4) Protein arginine N-methyltransferase 7 (EC 2...	28	7.1
41	SYV_CORDI (Q6NFV0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	28	7.1
42	SCAP_CRIGR (P97260) Sterol regulatory element-binding protein cl...	28	7.1
43	K0853_HUMAN (Q5T200) Protein KIAA0853	28	7.1
44	SWI6_SCHPO (P40381) Chromatin-associated protein swi6	28	7.1
45	VCY1_HUMAN (O14598) Testis-specific basic protein Y 1 (Variably ...	28	7.1
46	FUCI_HAEIN (P44779) L-fucose isomerase (EC 5.3.1.25) (6-deoxy-L-...	27	9.3
47	Y9637_RHILO (Q98P28) UPF0229 protein mll9637	27	9.3
48	IRK14_RAT (O70596) ATP-sensitive inward rectifier potassium chan...	27	9.3
49	Y1738_CHRVO (Q7NX89) UPF0313 protein CV_1738	27	9.3
50	TTBK2_MOUSE (Q3UVR3) Tau-tubulin kinase 2	27	9.3
51	VE2_HPV37 (Q80903) Regulatory protein E2	27	9.3
52	CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5...	27	9.3
53	TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)	27	9.3
54	CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) ...	27	9.3
55	ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor...	27	9.3
56	BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7...	27	9.3

>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2|
          Length = 997

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -2

Query: 265 IRRDPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEEAEPTTVTAVRSEPA 104
           ++RDPAE+                A +RA + + EA   EA P     VR+EPA
Sbjct: 95  VKRDPAEL------------AAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPA 136

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>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2|
          Length = 997

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -2

Query: 265 IRRDPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEEAEPTTVTAVRSEPA 104
           ++RDPAE+                A +RA + + EA   EA P     VR+EPA
Sbjct: 95  VKRDPAEL------------AAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPA 136

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>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39|
           member 5)
          Length = 539

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -1

Query: 311 HNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPE 186
           H++ L R  G   G H P +GR   P+A N +H    P +PE
Sbjct: 62  HSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHR---PQNPE 100

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>IE63_EBV (Q04360) Transcriptional regulator IE63 homolog (Diffuse early|
           antigen)
          Length = 438

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = -1

Query: 356 TQDRQSHHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHS 210
           T +       LPP       PR+   PR   SPR+ R  R +   RS S
Sbjct: 96  TDESYGKRRHLPPGARAPRAPRAPRVPRAPRSPRAPRSNRATRGPRSES 144

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>EWS_MOUSE (Q61545) RNA-binding protein EWS|
          Length = 655

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 164 SGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAGQ 304
           SG F+GP    S  G    G  R G D G +S   R G     GAG+
Sbjct: 282 SGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGE 328

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>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
            (Low-voltage-activated calcium channel alpha1 3.2
            subunit)
          Length = 2353

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 11/79 (13%)
 Frame = -2

Query: 292  GPPERPAAGIRR-----------DPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEE 146
            GP   PA G RR           +P   D           G      R   C     ++ 
Sbjct: 2172 GPEAEPALGARRKKKMSPPCISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHRDS 2231

Query: 145  AEPTTVTAVRSEPARKGGR 89
             EPT  +    +PA KG R
Sbjct: 2232 LEPTEGSGAGGDPAAKGER 2250

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>MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS)|
           (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting
           substance)
          Length = 560

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 301 TCPGPPERPAAGIRRDPAEIDXXXXXXXXXASGVRAAPSRAS 176
           T P PP RP+A +   P   D            +R  P+RAS
Sbjct: 268 TVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARAS 309

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>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)|
          Length = 388

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -1

Query: 293 RSTGAPRGGH---SPRSGRDRRPSAANRSHSLRGP 198
           R+ G  RGGH    PR G DRR   A   H +R P
Sbjct: 95  RAAGLGRGGHRRPGPRRGVDRRRRPAAGKHPVRRP 129

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>SYD_PROMA (Q7V9I1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 605

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +1

Query: 151 LEALLRSICWPGSGLLGPRRLWERLAAEGRRSRPDL 258
           LEAL    C P    LG RRLWE      R    DL
Sbjct: 457 LEALHHPFCAPNQSDLGQRRLWETNLPTARAQAYDL 492

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>CAD22_RAT (Q63315) Cadherin-22 precursor (Pituitary and brain cadherin)|
           (PB-cadherin)
          Length = 813

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -1

Query: 269 GHSPRSGRDRRPSAANRS--HSL-RGPSSPEP 183
           G  P  G    P AA+ S  HSL RGPSSPEP
Sbjct: 696 GGDPGGGAASPPQAASSSERHSLPRGPSSPEP 727

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>CAD22_MOUSE (Q9WTP5) Cadherin-22 precursor (Pituitary and brain cadherin)|
           (PB-cadherin)
          Length = 813

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -1

Query: 269 GHSPRSGRDRRPSAANRS--HSL-RGPSSPEP 183
           G  P  G    P AA+ S  HSL RGPSSPEP
Sbjct: 696 GGDPGGGAASPPQAASSSERHSLPRGPSSPEP 727

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>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 296 PRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 180
           P   G PR   SP+  R R PS    S   + P SP+ G
Sbjct: 435 PPPQGGPRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSG 473

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>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 296 PRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 180
           P   G PR   SP+  R R PS    S   + P SP+ G
Sbjct: 435 PPPQGGPRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSG 473

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>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
           (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 25.0 bits (53), Expect(2) = 2.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -2

Query: 205 GVRAAPSRASKCSGEAPQEEAEPTTVTAVRSEPARKGGR 89
           G  AAP+ A++     P   A+P      R   AR GGR
Sbjct: 849 GAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGR 887



 Score = 22.7 bits (47), Expect(2) = 2.4
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -1

Query: 281 APRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 180
           APR    P   R RRP         RG   P PG
Sbjct: 820 APR----PAEKRSRRPRGPGPGPGRRGGGGPAPG 849

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>Y525_PSEAE (Q51484) Hypothetical protein PA0525|
          Length = 612

 Score = 25.8 bits (55), Expect(2) = 2.5
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +1

Query: 136 WALPLLEALLRSICWPGSGLLGPRRLWERLAAEGRRSRPDLGECPPRGAPVD 291
           WA  LL+A      +P    L PR  + RL A   R RP L +CP   A ++
Sbjct: 133 WARQLLDA------YPA---LRPR--YARLVAAHLRQRPSLDDCPAADAELE 173



 Score = 21.9 bits (45), Expect(2) = 2.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 284 RWTGAGQHYDGEEEAA 331
           RWT +    DGEE AA
Sbjct: 208 RWTPSASAEDGEEAAA 223

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>SYGP1_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synaptic|
           Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
           (Neuronal RasGAP)
          Length = 1328

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -1

Query: 353 QDRQSHHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSA-ANRSHSLRG-PSSP-EP 183
           +DR+S   +    R  V +P   G P G H    GR RR S    + +S+ G P++P  P
Sbjct: 55  RDRRSESSRNKLLRRTVSVPVE-GRPHGEHEYHLGRSRRKSVPGGKQYSMEGAPAAPFRP 113

Query: 182 GQQML 168
            Q  L
Sbjct: 114 SQGFL 118

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>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5)
          Length = 1511

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = -1

Query: 323 PPXRHNVDL--PRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEP 183
           PP  +  D   P++    +   SP  GRD  P +   S SLR   SP P
Sbjct: 296 PPKAYREDKSEPKAYRRRQRSLSPLGGRDESPVSHRASQSLRSRKSPSP 344

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>ANMX_CRILO (Q99MI9) Protein arginine N-methyltransferase (EC 2.1.1.-)|
          Length = 729

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 260 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 355
           AN   G+L W    +HYD  +E A   + D++
Sbjct: 45  ANPTTGSLEWLEEDEHYDYHQEIARSSYADML 76

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>DNAK_NATPD (Q3IUI0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 656

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/53 (39%), Positives = 23/53 (43%)
 Frame = +2

Query: 164 SGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAGQHYDGEE 322
           +GA AG A G    G  G G    G  +G        GA    GAGQ  DGEE
Sbjct: 588 AGAGAGAAGGMGGAGPGGMGGAGPG-GMGGAGPGGMGGAGPGAGAGQQGDGEE 639

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>ANM7_MOUSE (Q922X9) Protein arginine N-methyltransferase 7 (EC 2.1.1.-)|
          Length = 692

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 260 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 355
           AN   G+L W    +HYD  +E A   + D++
Sbjct: 8   ANPTTGSLEWLEEDEHYDYHQEIARSSYADML 39

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>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
           leucine-rich repeat protein 11)
          Length = 1146

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 362 PETQDRQSHHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRR 237
           P+ Q  + H M+ P  RH+   PR++G P G  +    R RR
Sbjct: 549 PKIQFTKPHTMR-PASRHSTAPPRTSGTPSGTTASSGARRRR 589

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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -1

Query: 296 PRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPS--SPEPG 180
           PR  G  R G++PR G   RP          GP+  +P PG
Sbjct: 188 PRPGGGNRSGNAPRPGGGPRPGGNRPQGGQGGPAERAPRPG 228

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>PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC)|
          Length = 1434

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 269  GHSPRSGRDRRPSAANRSHSLRGPSSPEPGQQM 171
            GHS  S RDR      RSH+ R P+S   G  +
Sbjct: 1315 GHSGPSNRDRSGPRGARSHNPRNPTSTAMGSSV 1347

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
 Frame = -1

Query: 284 GAPRGGHSPRSGRDRRPSAANRSHSLR----GPSSPEPG 180
           G PR G  PR G   RP    RS + R    GP    PG
Sbjct: 206 GGPRPGGGPRPGGAPRPQGGQRSGAPRDGQGGPRGQRPG 244



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = -1

Query: 296 PRSTGA-----PR-GGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQ 177
           P STGA     PR GG  PR G   RP  A R    +   +P  GQ
Sbjct: 190 PFSTGAADRPGPRPGGGGPRPGGGPRPGGAPRPQGGQRSGAPRDGQ 235

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>TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Protein NYD-SP30)|
          Length = 887

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
 Frame = -1

Query: 314 RHNVDLPRSTGAPRGGHSPRSGRDR-----------RPSAANRSHSLRGPSS 192
           R +V  PRS  A     SP SG  R           RP++A+RSHSL   SS
Sbjct: 599 RRSVSCPRSISA----QSPSSGDTRPFSAQQMISVSRPTSASRSHSLNRASS 646

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>TM16B_HUMAN (Q9NQ90) Transmembrane protein 16B|
          Length = 999

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -1

Query: 302 DLPRSTGAPR---------GGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQ 177
           D+P   G+PR         GG  P+ G+        R+  L+G S+ +PGQ
Sbjct: 4   DIPLLPGSPRRLSPQAGSRGGQGPKHGQQCLKMPGPRAPGLQGGSNRDPGQ 54

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>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (ACAMP-81)
          Length = 331

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -2

Query: 289 PPERPAAGIRRDPAEIDXXXXXXXXXASGVRAAPSRASKC--SGEAPQEEAEPTTVTAVR 116
           PP    A    +P++ +         A+G  A  +    C  +G AP+EEA P   ++  
Sbjct: 250 PPASEEAKAVEEPSKAEEKAEEAGVSAAGCEAPSAAGPGCPRAGGAPREEAAPPRASSAC 309

Query: 115 SEPARK 98
           S P+++
Sbjct: 310 SAPSQE 315

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>DNAE2_RHILO (Q98E34) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1118

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 145  PLLEALLRSICWPGSGLLGPRRL-WERLAAEGRRSRPDLGECPPR 276
            P L  LL  +   G+G  GP+ + + +     RRSRP++G  P R
Sbjct: 1055 PWLTVLLEKVS--GAGAPGPQPMGYAKEVGSDRRSRPEIGNAPAR 1097

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>TPR_HUMAN (P12270) Nucleoprotein TPR|
          Length = 2349

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 290  STGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSP 189
            +TGA     S    R+++PS+A+   + R P SP
Sbjct: 2027 NTGAAESSFSQEVSREQQPSSASERQAPRAPQSP 2060

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>GSK3A_RAT (P18265) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3|
           alpha) (Factor A) (FA)
          Length = 483

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 167 GAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAG 301
           G   GP    S PGG G G    G   G + A++  G    +G G
Sbjct: 31  GGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPSGSGGG 75

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>VE4_HPV57 (P22157) Probable protein E4|
          Length = 124

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 362 PETQDRQSHHMQLPPXRHNVDLPRSTG--APRGGHSP 258
           P+ Q +   H + PP RH V  P ++G  +   G+SP
Sbjct: 50  PQPQQQSRPHSRTPPRRHRVRHPSASGSSSDSSGNSP 86

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>MYCN_CHICK (P18444) N-myc proto-oncogene protein|
          Length = 441

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 293 RSTGAPRGGHSPRSGRDRRPSAANRSHSLRG 201
           R    P GG +PR GR   P+  +R+ S  G
Sbjct: 205 REAAVPSGGETPRGGRRPGPAGESRASSSSG 235

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>SYE_SYMTH (Q67TJ2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 482

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +1

Query: 31  VFLLRKAENCSRSKKK--ATFISPLFLPARSGRR*RWWALPLLEALLRSICWPGSGLLGP 204
           +FL  + E   ++ +K     + P F     G R   W++P +E L+RSI       L P
Sbjct: 385 IFLKDEIEMDEKAARKFLTEAVKPFFQRVSEGLRSVEWSVPAIEQLVRSI--QEEMGLTP 442

Query: 205 RRLWE--RLAAEGRRSRPDLGE 264
           +  ++  R+A  GR + P L E
Sbjct: 443 KESFQPIRVAITGRTASPGLFE 464

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>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = +2

Query: 206 GGCGSGWRRRGVDLGRISANARRGALRWTGAGQHYDGEEEAACGDFG 346
           GG G G RR G   G        G   + G G  Y G  E   G +G
Sbjct: 103 GGGGYGGRREGGGGGGYGGRREGGGGGYGGGGGGYGGRREGGDGGYG 149

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>SPAG1_HUMAN (Q07617) Sperm-associated antigen 1 (Infertility-related sperm|
           protein Spag-1) (HSD-3.8)
          Length = 926

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 284 GAPRGGHSPRSGRDRR-PSAANRSHSLRGPSSPEPG 180
           GAP+ G +P +G D+R P  A+ + +  G ++  PG
Sbjct: 402 GAPQRGQTPEAGADKRSPRRASAAAAAGGGATGHPG 437

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>S39A5_MOUSE (Q9D856) Zinc transporter ZIP5 precursor (Solute carrier family 39|
           member 5)
          Length = 535

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 311 HNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGP 198
           H++ L R  G   G H P +GR    S  N +H L+ P
Sbjct: 62  HSLGLGRVQGLRLGHHEPPTGRAAPTSGDNFTHRLQEP 99

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>GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3|
           alpha)
          Length = 483

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 167 GAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAG 301
           G   GP    S PGG G G    G   G + A++  G    +G G
Sbjct: 31  GGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGG 75

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>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 16) (ADAM-TS
            16) (ADAM-TS16)
          Length = 1224

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 176  AGPARGCSDPGGCGSGWRRRGVDLGRISANAR 271
            AGP   CS    CG GWR+R V     + +AR
Sbjct: 992  AGPWAECSHT--CGKGWRKRAVACKSTNPSAR 1021

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>IF2_VIBF1 (Q5E7L5) Translation initiation factor IF-2|
          Length = 893

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 329 QLPPXRHNVDLPRSTGAPRGGHSPRSGRDRR 237
           Q P  R     P    APRGG + R GR+++
Sbjct: 259 QQPRRRKKKAKPAEAAAPRGGRNQRGGRNKK 289

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>ANM7_HUMAN (Q9NVM4) Protein arginine N-methyltransferase 7 (EC 2.1.1.-)|
          Length = 692

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 260 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 355
           AN   G++ W    +HYD  +E A   + D++
Sbjct: 8   ANPTTGSVEWLEEDEHYDYHQEIARSSYADML 39

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>SYV_CORDI (Q6NFV0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 919

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 304 LTCPGPPERPAAGIRRDPAEID 239
           + C GP E+P AG  +DP  +D
Sbjct: 453 IVCVGPDEQPPAGYEQDPDVLD 474

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>SCAP_CRIGR (P97260) Sterol regulatory element-binding protein|
           cleavage-activating protein (SREBP cleavage-activating
           protein) (SCAP)
          Length = 1276

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
 Frame = +1

Query: 184 GSGLLGPRRLWERLAAEGRRSRPDLGECP-----PRGAP 285
           G G    +  WERL+  G+ S  + GE P     PRG P
Sbjct: 823 GGGAFETQENWERLSDGGKTSPEEPGESPPLRHRPRGPP 861

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -1

Query: 359 ETQDRQSHHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSP 189
           +T+D +         R   D PRST      HSP S R    S+ + S   R   SP
Sbjct: 293 KTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPSP 349

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>SWI6_SCHPO (P40381) Chromatin-associated protein swi6|
          Length = 328

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 9/89 (10%)
 Frame = -2

Query: 295 PGPPERPAAGIRRDPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEEAEPTTVTAVR 116
           P   +   A  + D    D          S  +     A +  G   +EE E      ++
Sbjct: 29  PSMTKEAIASHKADSGSSDNEVESDHESKSSSKKLKENAKEEEGGEEEEEDEYVVEKVLK 88

Query: 115 SEPARKGGR*RWLFSW---------TWSS 56
              ARKGG   +L  W         TWSS
Sbjct: 89  HRMARKGGGYEYLLKWEGYDDPSDNTWSS 117

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>VCY1_HUMAN (O14598) Testis-specific basic protein Y 1 (Variably charged|
           protein Y)
          Length = 125

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 359 ETQDRQSHHMQLP--PXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPE 186
           ET  R+S     P  P +    +     A RGG   + G   + +A     +  GP++P 
Sbjct: 16  ETGKRKSSSQPSPSGPKKKTTKVAEKGEAVRGGRRGKKGAATKMAAVTAPEAESGPAAPG 75

Query: 185 PGQQ 174
           P  Q
Sbjct: 76  PSDQ 79

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>FUCI_HAEIN (P44779) L-fucose isomerase (EC 5.3.1.25) (6-deoxy-L-galactose|
           isomerase) (FucIase)
          Length = 589

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 287 WTGAGQHYDGEEEAACGDFGDL 352
           W G GQ  +G++  AC +FG L
Sbjct: 566 WNGFGQDKEGQDYRACQNFGPL 587

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>Y9637_RHILO (Q98P28) UPF0229 protein mll9637|
          Length = 436

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 311 HNVDLPRS-TGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 180
           H V +PR  TG P  G    SGR +     NR+ S  G   P+PG
Sbjct: 50  HVVPIPRKGTGEPTFGDDKESGRRQHILPGNRTFS-SGDLIPKPG 93

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>IRK14_RAT (O70596) ATP-sensitive inward rectifier potassium channel 14|
           (Potassium channel, inwardly rectifying subfamily J
           member 14) (Inward rectifier K(+) channel Kir2.4) (IRK4)
          Length = 434

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +2

Query: 152 LRRFSGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRG 277
           LRR SGA         D    G+G  R G   G ++ N RRG
Sbjct: 7   LRRLSGALEPGNSRAGDEEEAGAGLCRNGWAPGPVAGNRRRG 48

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>Y1738_CHRVO (Q7NX89) UPF0313 protein CV_1738|
          Length = 758

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 9/48 (18%)
 Frame = -1

Query: 341 SHHMQLPPX---------RHNVDLPRSTGAPRGGHSPRSGRDRRPSAA 225
           S H  +PP          RH +  P + G   G   P+ G+  +P+AA
Sbjct: 676 SKHCLIPPTPPGDKAAAVRHKMGAPMNRGKSPGARHPQQGQRAKPAAA 723

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>TTBK2_MOUSE (Q3UVR3) Tau-tubulin kinase 2|
          Length = 1243

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 338  HHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQ 177
            H+ + PP    V     + +PR    PR+     PS A R H  +  SSP  G+
Sbjct: 1134 HNPKTPPKSPVVPRRSPSASPRSSSLPRTS-SSSPSRAGRPHHDQRSSSPHLGR 1186

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>VE2_HPV37 (Q80903) Regulatory protein E2|
          Length = 454

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 293 RSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQ 177
           RS    RG  +   G DRR     RS+S    SSP+ G+
Sbjct: 268 RSRSTSRGKQATSRGGDRRRRRRERSYSRDTSSSPDRGR 306

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>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 263 SPRSGRDRRPSAANRSHSLRGPSSPEP 183
           SP  GRD  P +   S SLR   SP P
Sbjct: 317 SPLGGRDDSPVSHRASQSLRSRKSPSP 343

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>TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)|
          Length = 1244

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 338  HHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQ 177
            H+ + PP    V     + +PR    PR+     PS A R H  +  SSP  G+
Sbjct: 1135 HNPKTPPKSPVVPRRSPSASPRSSSLPRTS-SSSPSRAGRPHHDQRSSSPHLGR 1187

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>CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) (MS-PCP36)|
          Length = 342

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 176 AGPARGCSDPGGCGSGWRRRGVDLGRISA---NARRGALRWTGAGQHYDGEEEAACGDFG 346
           AGP  G S  GG GSG+   G   G   +       GA    GAG  + G+     G  G
Sbjct: 40  AGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGAFGHGGAGSGFGGQAGGYSGAGG 99

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>ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor alphaA-CRYBP1)|
            (Alpha A-crystallin-binding protein I) (Alpha A-CRYBP1)
          Length = 2688

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -1

Query: 344  QSHHMQLPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 180
            +  H Q PP     D PRS G     HS  S   R P+A N       P++  PG
Sbjct: 2268 KDEHEQAPPA----DTPRSPGHQLSVHSSESDVLRSPAAGN-------PAAGSPG 2311

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>BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 753

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
 Frame = -1

Query: 359 ETQDRQSHHMQ------LPPXRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGP 198
           +TQ + S H Q      LPP + +   P+          P     + PSA  + +S RGP
Sbjct: 422 QTQQQSSRHHQSQPYQSLPPQKSSQPHPQQIPEAAPVQQPSQQPPQEPSAHQQQYSSRGP 481


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,391,040
Number of Sequences: 219361
Number of extensions: 964038
Number of successful extensions: 4005
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3949
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result