>gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence
          Length = 239297

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 32     cccactctctctcccccaccctccgcctc 60
              |||||||||||| ||||||||||| ||||
Sbjct: 117062 cccactctctcttccccaccctccacctc 117090

>emb|AL365445.11| Human DNA sequence from clone RP4-796B4 on chromosome 1p32.1-33
             Contains a novel pseudogene (FLJ40434), the DMRTB1 gene
             for DMRT-like family B with proline-rich C-terminal, 1 and
             two CpG islands, complete sequence
          Length = 106438

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    actctctctcccccaccctcc 55
             |||||||||||||||||||||
Sbjct: 92677 actctctctcccccaccctcc 92697

>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the
             3' end of the Nrp2 gene for neuropilin 2, complete
             sequence
          Length = 157987

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    cccactctctctcccccaccc 52
             |||||||||||||||||||||
Sbjct: 63469 cccactctctctcccccaccc 63449

>dbj|AK003078.1| Mus musculus adult male spleen cDNA, RIKEN full-length enriched
           library, clone:0910001J09 product:ubiquitin carrier
           protein E2 homolog [Homo sapiens], full insert sequence
          Length = 1001

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 32  cccactctctctcccccaccc 52
           |||||||||||||||||||||
Sbjct: 952 cccactctctctcccccaccc 932

>emb|AJ330986.1|HSA330986 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-GG11RS
          Length = 694

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 350 tgcacagttggatgcacagat 370
           |||||||||||||||||||||
Sbjct: 305 tgcacagttggatgcacagat 325

>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence
          Length = 205102

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 32  cccactctctctcccccaccctccgcctc 60
           |||||||||||| ||||||||||| ||||
Sbjct: 478 cccactctctcttccccaccctccacctc 450

>gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosome 1, complete sequence
          Length = 224730

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctctctctcccccaccctcc 55
              ||||||||||||||||||||
Sbjct: 186680 ctctctctcccccaccctcc 186661

>gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, complete sequence
          Length = 190301

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    cccactctctctcccccaccctcc 55
             ||||||||||| ||||||||||||
Sbjct: 51330 cccactctctcacccccaccctcc 51353

>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence
          Length = 215826

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    cccactctctctcccccaccctcc 55
             ||||||||||| ||||||||||||
Sbjct: 48500 cccactctctcacccccaccctcc 48477

>gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome 15, complete sequence
          Length = 198019

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    ccaaattcaaaacccactct 39
             ||||||||||||||||||||
Sbjct: 50375 ccaaattcaaaacccactct 50394

>gb|AC101810.5| Mus musculus chromosome 15, clone RP24-278M16, complete sequence
          Length = 178304

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ccaaattcaaaacccactct 39
              ||||||||||||||||||||
Sbjct: 171955 ccaaattcaaaacccactct 171974

>gb|AC026231.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-114F4, complete
              sequence
          Length = 208199

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctctctctcccccaccctcc 55
              ||||||||||||||||||||
Sbjct: 179950 ctctctctcccccaccctcc 179931

>dbj|BS000602.1| Pan troglodytes chromosome Y clone:PTB-547B05, complete sequences
          Length = 211728

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctctctctcccccaccctcc 55
              ||||||||||||||||||||
Sbjct: 135466 ctctctctcccccaccctcc 135447

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctctctctcccccaccctcc 55
              ||||||||||||||||||||
Sbjct: 827374 ctctctctcccccaccctcc 827355

>gb|AC147670.4| Pan troglodytes BAC clone CH251-94F1 from chromosome y, complete sequence
          Length = 172123

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctctctctcccccaccctcc 55
              ||||||||||||||||||||
Sbjct: 104065 ctctctctcccccaccctcc 104046

>gb|AC151848.4| Pan troglodytes BAC clone CH251-346F2 from chromosome y, complete
             sequence
          Length = 147582

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ctctctctcccccaccctcc 55
             ||||||||||||||||||||
Sbjct: 36501 ctctctctcccccaccctcc 36482

>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    tctctcccccaccctccgcc 58
             ||||||||||||||||||||
Sbjct: 67158 tctctcccccaccctccgcc 67177

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      ggccccagcggcagccgtcg 87
               ||||||||||||||||||||
Sbjct: 5464043 ggccccagcggcagccgtcg 5464024

>gb|AF463669.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 1845

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   ctctctctcccccaccctcc 55
            ||||||||||||||||||||
Sbjct: 1773 ctctctctcccccaccctcc 1754

>gb|AC018767.3|AC018767 Homo sapiens chromosome 16 clone RP11-279O17, complete sequence
          Length = 159857

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   gcctgagttgaagcctcttg 282
             ||||||||||||||||||||
Sbjct: 23039 gcctgagttgaagcctcttg 23058

>gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568A19, complete sequence
          Length = 157613

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   gcctgagttgaagcctcttg 282
             ||||||||||||||||||||
Sbjct: 47190 gcctgagttgaagcctcttg 47171

>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185799

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     cccactctctctcccccaccctcc 55
              |||||||||||||| |||||||||
Sbjct: 102474 cccactctctctccaccaccctcc 102497

>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence
          Length = 202603

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     cccactctctctcccccaccctcc 55
              ||||||||||||||||| ||||||
Sbjct: 112299 cccactctctctccccctccctcc 112322

>gb|AC004490.1|AC004490 Homo sapiens chromosome 19, cosmid R29381, complete sequence
          Length = 39143

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ctctctctcccccaccctcc 55
             ||||||||||||||||||||
Sbjct: 28051 ctctctctcccccaccctcc 28070

>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence
          Length = 233915

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    cccactctctctcccccaccctcc 55
             ||||||||||| ||||||||||||
Sbjct: 19586 cccactctctcacccccaccctcc 19563

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 52      ctccgcctcatccgatggcc 71
               ||||||||||||||||||||
Sbjct: 2558566 ctccgcctcatccgatggcc 2558547

>gb|AC156573.3| Mus musculus BAC clone RP23-133P6 from chromosome 15, complete sequence
          Length = 198278

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ctctctctcccccaccctcc 55
             ||||||||||||||||||||
Sbjct: 93431 ctctctctcccccaccctcc 93412

>emb|AL807814.5| Mouse DNA sequence from clone RP23-392I19 on chromosome X, complete
              sequence
          Length = 173965

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctctctctcccccaccctcc 55
              ||||||||||||||||||||
Sbjct: 164808 ctctctctcccccaccctcc 164789

>emb|AL928667.4| Mouse DNA sequence from clone RP23-139J18 on chromosome 4, complete
             sequence
          Length = 121094

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ctctctctcccccaccctcc 55
             ||||||||||||||||||||
Sbjct: 39434 ctctctctcccccaccctcc 39415

>emb|AL669895.9| Mouse DNA sequence from clone RP23-31N7 on chromosome X, complete
             sequence
          Length = 197638

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    actctctctcccccaccctc 54
             ||||||||||||||||||||
Sbjct: 69136 actctctctcccccaccctc 69117

>emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on chromosome 11, complete
             sequence
          Length = 101730

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ctctctctcccccaccctcc 55
             ||||||||||||||||||||
Sbjct: 37427 ctctctctcccccaccctcc 37446


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,662,421
Number of Sequences: 3902068
Number of extensions: 2662421
Number of successful extensions: 47694
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47603
Number of HSP's gapped (non-prelim): 91
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)