ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDCB_PSEAE (Q9I6S9) Probable 2-(5''-triphosphoribosyl)-3'-dephos... 30 2.2
2CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCC... 28 6.3

>MDCB_PSEAE (Q9I6S9) Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A|
           synthase (EC 2.7.8.25)
           (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase)
          Length = 293

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +3

Query: 84  ASRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPP 227
           A R+AL  DP A+ G          YG  G  EE   C  RAV  G P
Sbjct: 139 AGRIALLDDPAAAIGDSHGERVRRRYGVGGAREEARLCFPRAVRHGLP 186



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>CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCCVIA1) (Phantom|
           protein) (Dmphm)
          Length = 574

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 20/63 (31%), Positives = 25/63 (39%)
 Frame = +3

Query: 54  VRGYIHRNCIASRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPPAA 233
           VR +  R+ +  R  L L  G  GG G             C +E  W HAR  T     A
Sbjct: 102 VRDFFRRDVMTGRAPLYLTHGIMGGFGII-----------CAQEDIWRHARRETIDWLKA 150

Query: 234 LGV 242
           LG+
Sbjct: 151 LGM 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,183,742
Number of Sequences: 219361
Number of extensions: 409508
Number of successful extensions: 661
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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