ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl13e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475899.1| Oryza sativa (japonica cultivar-group), predic... 139 7e-30
2dbj|AK102111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
3dbj|AK062090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
4gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome... 70 6e-09
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
6ref|NM_188724.1| Oryza sativa (japonica cultivar-group), predic... 44 0.32
7emb|BX908736.10| Zebrafish DNA sequence from clone CH211-229C8 i... 44 0.32
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
9dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
10dbj|AK098860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
11dbj|AK067756.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
12ref|NM_191140.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
13dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14dbj|AK110766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
15emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.3
16dbj|AB034913.1| Mycobacterium gastri MB19 formaldehyde-fixing op... 42 1.3
17ref|NM_185475.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
18gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.1
19emb|BX927127.9| Zebrafish DNA sequence from clone DKEY-172K9 in ... 40 5.1
20dbj|AK127262.1| Homo sapiens cDNA FLJ45329 fis, clone BRHIP30071... 40 5.1
21emb|CR594443.1| full-length cDNA clone CS0DI037YB13 of Placenta ... 40 5.1
22dbj|AB226660.1| Aspergillus oryzae cDNA, contig sequence: AoEST3522 40 5.1
23dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 5.1
24gb|AC091899.2| Homo sapiens chromosome 5 clone RP11-158D20, comp... 40 5.1
25ref|XM_932477.1| PREDICTED: Homo sapiens similar to Proprotein c... 40 5.1
26gb|AC026796.5| Homo sapiens chromosome 5 clone CTD-2292M14, comp... 40 5.1
27ref|NM_070625.3| Caenorhabditis elegans Y116A8C.26 (Y116A8C.26) ... 40 5.1
28gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.1
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
30gb|AF057710.1|AF057710 Homo sapiens clone ICRFP700K1680Q06 lymph... 40 5.1
31gb|AF057709.1|AF057709 Homo sapiens clone ICRFP700B2221Q06 lymph... 40 5.1
32dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
33dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
34emb|BX640723.1|HSM806796 Homo sapiens mRNA; cDNA DKFZp686B01212 ... 40 5.1
35dbj|AK106449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
36emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.1
37emb|BX323070.7| Zebrafish DNA sequence from clone DKEY-45H7 in l... 40 5.1
38emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, com... 40 5.1
39gb|AC005562.1|AC005562 Homo sapiens chromosome 17, clone hRPK.27... 40 5.1
40dbj|AP000936.7| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.1
41dbj|AP000892.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 5.1
42dbj|AK112792.1| Ciona intestinalis cDNA, clone:cilv015p09, full ... 40 5.1
43gb|U73638.1|U73638 Human Chromosome 11 Cosmid cSRL16b6, complete... 40 5.1
44dbj|AP005018.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.1 
>ref|XM_475899.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1581

 Score =  139 bits (70), Expect = 7e-30
 Identities = 205/250 (82%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccggcgagctggaagccgtgttccgtgcggcggccgacttcgcctcctacccaggagtgc 173
           |||||||| |||||||  || |||| ||||| || || ||||| ||||||||||||| ||
Sbjct: 23  ccggcgagatggaagcgatgctccgggcggcagcggagttcgcgtcctacccaggagcgc 82

                                                                       
Query: 174 atggcgaggacgcagtgaggcagttcctggagcagttccctcttcatgacctgctaggtg 233
           |||| || ||| | |||||||||||||||||||| | |||||| |   | ||| ||||||
Sbjct: 83  atggtgatgacaccgtgaggcagttcctggagcaataccctctgcccaagctgttaggtg 142

                                                                       
Query: 234 cgttgcagagtcagggagccgagcctgagacggttgaaactgttgcagcttgcttggaca 293
           | ||||||||| |||  |  |  |||| || || ||||||| |||| || ||||||||||
Sbjct: 143 cattgcagagtgaggctgatgtacctgggatggatgaaactattgccgcatgcttggaca 202

                                                                       
Query: 294 aagtatttccgtccagatatggagcttcacttctgcccagctatgctgcatttattgaag 353
           |||||||| | || ||||||||||| ||| ||||||| ||||||| |||||||||| |||
Sbjct: 203 aagtattttcttcgagatatggagcatcatttctgccaagctatggtgcatttattcaag 262

                     
Query: 354 ctgggttgct 363
           |||| |||||
Sbjct: 263 ctggattgct 272
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>dbj|AK102111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084F06, full
           insert sequence
          Length = 1907

 Score =  139 bits (70), Expect = 7e-30
 Identities = 205/250 (82%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccggcgagctggaagccgtgttccgtgcggcggccgacttcgcctcctacccaggagtgc 173
           |||||||| |||||||  || |||| ||||| || || ||||| ||||||||||||| ||
Sbjct: 141 ccggcgagatggaagcgatgctccgggcggcagcggagttcgcgtcctacccaggagcgc 200

                                                                       
Query: 174 atggcgaggacgcagtgaggcagttcctggagcagttccctcttcatgacctgctaggtg 233
           |||| || ||| | |||||||||||||||||||| | |||||| |   | ||| ||||||
Sbjct: 201 atggtgatgacaccgtgaggcagttcctggagcaataccctctgcccaagctgttaggtg 260

                                                                       
Query: 234 cgttgcagagtcagggagccgagcctgagacggttgaaactgttgcagcttgcttggaca 293
           | ||||||||| |||  |  |  |||| || || ||||||| |||| || ||||||||||
Sbjct: 261 cattgcagagtgaggctgatgtacctgggatggatgaaactattgccgcatgcttggaca 320

                                                                       
Query: 294 aagtatttccgtccagatatggagcttcacttctgcccagctatgctgcatttattgaag 353
           |||||||| | || ||||||||||| ||| ||||||| ||||||| |||||||||| |||
Sbjct: 321 aagtattttcttcgagatatggagcatcatttctgccaagctatggtgcatttattcaag 380

                     
Query: 354 ctgggttgct 363
           |||| |||||
Sbjct: 381 ctggattgct 390
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>dbj|AK062090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G10, full
           insert sequence
          Length = 1872

 Score =  139 bits (70), Expect = 7e-30
 Identities = 205/250 (82%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccggcgagctggaagccgtgttccgtgcggcggccgacttcgcctcctacccaggagtgc 173
           |||||||| |||||||  || |||| ||||| || || ||||| ||||||||||||| ||
Sbjct: 106 ccggcgagatggaagcgatgctccgggcggcagcggagttcgcgtcctacccaggagcgc 165

                                                                       
Query: 174 atggcgaggacgcagtgaggcagttcctggagcagttccctcttcatgacctgctaggtg 233
           |||| || ||| | |||||||||||||||||||| | |||||| |   | ||| ||||||
Sbjct: 166 atggtgatgacaccgtgaggcagttcctggagcaataccctctgcccaagctgttaggtg 225

                                                                       
Query: 234 cgttgcagagtcagggagccgagcctgagacggttgaaactgttgcagcttgcttggaca 293
           | ||||||||| |||  |  |  |||| || || ||||||| |||| || ||||||||||
Sbjct: 226 cattgcagagtgaggctgatgtacctgggatggatgaaactattgccgcatgcttggaca 285

                                                                       
Query: 294 aagtatttccgtccagatatggagcttcacttctgcccagctatgctgcatttattgaag 353
           |||||||| | || ||||||||||| ||| ||||||| ||||||| |||||||||| |||
Sbjct: 286 aagtattttcttcgagatatggagcatcatttctgccaagctatggtgcatttattcaag 345

                     
Query: 354 ctgggttgct 363
           |||| |||||
Sbjct: 346 ctggattgct 355
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>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
             complete sequence
          Length = 144601

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 268   tgaaactgttgcagcttgcttggacaaagtatttccgtccagatatggagcttcacttct 327
             ||||||| |||| || |||||||||||||||||| | || ||||||||||| ||| ||||
Sbjct: 89158 tgaaactattgccgcatgcttggacaaagtattttcttcgagatatggagcatcatttct 89217

                        
Query: 328   gcccagctatg 338
             ||| |||||||
Sbjct: 89218 gccaagctatg 89228



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 165   caggagtgcatggcgaggacgcagtgaggcagttcctggagcagttccctct 216
             |||||| |||||| || ||| | |||||||||||||||||||| | ||||||
Sbjct: 88885 caggagcgcatggtgatgacaccgtgaggcagttcctggagcaataccctct 88936
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 268      tgaaactgttgcagcttgcttggacaaagtatttccgtccagatatggagcttcacttct 327
                ||||||| |||| || |||||||||||||||||| | || ||||||||||| ||| ||||
Sbjct: 27493028 tgaaactattgccgcatgcttggacaaagtattttcttcgagatatggagcatcatttct 27493087

                           
Query: 328      gcccagctatg 338
                ||| |||||||
Sbjct: 27493088 gccaagctatg 27493098



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 165      caggagtgcatggcgaggacgcagtgaggcagttcctggagcagttccctct 216
                |||||| |||||| || ||| | |||||||||||||||||||| | ||||||
Sbjct: 27492755 caggagcgcatggtgatgacaccgtgaggcagttcctggagcaataccctct 27492806
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>ref|NM_188724.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2559

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 103 ggagatggacgccggcgagctg 124
           ||||||||||||||||||||||
Sbjct: 822 ggagatggacgccggcgagctg 843
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>emb|BX908736.10| Zebrafish DNA sequence from clone CH211-229C8 in linkage group 18,
              complete sequence
          Length = 159047

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 323    cttctgcccagctatgctgcatttat 348
              ||||||| ||||||||||||||||||
Sbjct: 123370 cttctgctcagctatgctgcatttat 123345
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 103     ggagatggacgccggcgagctg 124
               ||||||||||||||||||||||
Sbjct: 7866591 ggagatggacgccggcgagctg 7866570



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 113      gccggcgagctggaagccgtg 133
                |||||||||||||||||||||
Sbjct: 30913925 gccggcgagctggaagccgtg 30913945
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>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 103   ggagatggacgccggcgagctg 124
             ||||||||||||||||||||||
Sbjct: 61537 ggagatggacgccggcgagctg 61516
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>dbj|AK098860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N23, full
           insert sequence
          Length = 2372

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 103 ggagatggacgccggcgagctg 124
           ||||||||||||||||||||||
Sbjct: 121 ggagatggacgccggcgagctg 142
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>dbj|AK067756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116N03, full
           insert sequence
          Length = 2460

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 103 ggagatggacgccggcgagctg 124
           ||||||||||||||||||||||
Sbjct: 185 ggagatggacgccggcgagctg 206
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>ref|NM_191140.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1578

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  gccggcgagctggaagccgtg 133
            |||||||||||||||||||||
Sbjct: 1155 gccggcgagctggaagccgtg 1175
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>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0638D12
          Length = 161277

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    gccggcgagctggaagccgtg 133
              |||||||||||||||||||||
Sbjct: 114292 gccggcgagctggaagccgtg 114312
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>dbj|AK110766.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-A06, full
           insert sequence
          Length = 1466

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 gccggcgagctggaagccgtg 133
           |||||||||||||||||||||
Sbjct: 940 gccggcgagctggaagccgtg 960
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 95     gccgcggcggagatggacgccggcg 119
              ||||||||||||||||| |||||||
Sbjct: 827096 gccgcggcggagatggaggccggcg 827072
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>dbj|AB034913.1| Mycobacterium gastri MB19 formaldehyde-fixing operon genes (orf1,
            rmpR, rmpB, rmpA, rmpD), partial and complete cds
          Length = 4199

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 107  atggacgccggcgagctggaagccg 131
            ||||||||||||||||| |||||||
Sbjct: 2704 atggacgccggcgagctcgaagccg 2728
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>ref|NM_185475.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3084

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  gtgcatggcgaggacgcagt 189
            ||||||||||||||||||||
Sbjct: 2048 gtgcatggcgaggacgcagt 2029
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     cgccggcgagctggaagccg 131
               ||||||||||||||||||||
Sbjct: 2607834 cgccggcgagctggaagccg 2607815
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>emb|BX927127.9| Zebrafish DNA sequence from clone DKEY-172K9 in linkage group 18,
             complete sequence
          Length = 121656

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 331   cagctatgctgcatttattgaagc 354
             ||||||||||||||||||| ||||
Sbjct: 34420 cagctatgctgcatttattaaagc 34397
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>dbj|AK127262.1| Homo sapiens cDNA FLJ45329 fis, clone BRHIP3007183, highly  similar
            to Proprotein convertase subtilisin/kexin type 7
            precursor (EC 3.4.21.-)
          Length = 5027

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 181  ggacgcagtgaggcagttcctggagcag 208
            |||| ||||||||||| |||||||||||
Sbjct: 2808 ggacacagtgaggcagctcctggagcag 2835
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>emb|CR594443.1| full-length cDNA clone CS0DI037YB13 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 762

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 181 ggacgcagtgaggcagttcctggagcag 208
           |||| ||||||||||| |||||||||||
Sbjct: 628 ggacacagtgaggcagctcctggagcag 601
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>dbj|AB226660.1| Aspergillus oryzae cDNA, contig sequence: AoEST3522
          Length = 847

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ggcggagatggacgccggcg 119
           ||||||||||||||||||||
Sbjct: 798 ggcggagatggacgccggcg 817
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 100     ggcggagatggacgccggcg 119
               ||||||||||||||||||||
Sbjct: 1220276 ggcggagatggacgccggcg 1220257
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>gb|AC091899.2| Homo sapiens chromosome 5 clone RP11-158D20, complete sequence
          Length = 139253

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   gagcttcacttctgcccagc 334
             ||||||||||||||||||||
Sbjct: 29709 gagcttcacttctgcccagc 29690
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>ref|XM_932477.1| PREDICTED: Homo sapiens similar to Proprotein convertase
           subtilisin/kexin type 7 precursor (Proprotein convertase
           PC7) (Subtilisin/kexin-like protease PC7) (Prohormone
           convertase PC7) (PC8) (hPC8) (Lymphoma proprotein
           convertase), transcript variant 5 (LOC653303), mRNA
          Length = 1229

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 181 ggacgcagtgaggcagttcctggagcag 208
           |||| ||||||||||| |||||||||||
Sbjct: 260 ggacacagtgaggcagctcctggagcag 287
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>gb|AC026796.5| Homo sapiens chromosome 5 clone CTD-2292M14, complete sequence
          Length = 151019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   gagcttcacttctgcccagc 334
             ||||||||||||||||||||
Sbjct: 19706 gagcttcacttctgcccagc 19725
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>ref|NM_070625.3| Caenorhabditis elegans Y116A8C.26 (Y116A8C.26) mRNA, complete cds
          Length = 2903

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gagctggaagccgtgttccg 138
           ||||||||||||||||||||
Sbjct: 963 gagctggaagccgtgttccg 982
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 48      acccagagccagcccgcggcggcg 71
               |||||||||||| |||||||||||
Sbjct: 1612024 acccagagccagaccgcggcggcg 1612047
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     gtgcatggcgaggacgcagt 189
               ||||||||||||||||||||
Sbjct: 1465537 gtgcatggcgaggacgcagt 1465556
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>gb|AF057710.1|AF057710 Homo sapiens clone ICRFP700K1680Q06 lymphoma pro-protein convertase
            (LPC) gene, partial cds
          Length = 3921

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 181  ggacgcagtgaggcagttcctggagcag 208
            |||| ||||||||||| |||||||||||
Sbjct: 1707 ggacacagtgaggcagctcctggagcag 1734
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>gb|AF057709.1|AF057709 Homo sapiens clone ICRFP700B2221Q06 lymphoma pro-protein convertase
            (LPC) duplicate gene, duplicated exons 13-17, and
            platelet activating factor acetylhydrolase, alpha2
            subunit (PAF-AH1A2) gene, exon 1
          Length = 9820

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 181  ggacgcagtgaggcagttcctggagcag 208
            |||| ||||||||||| |||||||||||
Sbjct: 1717 ggacacagtgaggcagctcctggagcag 1744
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>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0038F22
          Length = 101666

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gtgcatggcgaggacgcagt 189
             ||||||||||||||||||||
Sbjct: 72823 gtgcatggcgaggacgcagt 72842
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0425F02
          Length = 176979

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    gtgcatggcgaggacgcagt 189
              ||||||||||||||||||||
Sbjct: 174076 gtgcatggcgaggacgcagt 174095
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>emb|BX640723.1|HSM806796 Homo sapiens mRNA; cDNA DKFZp686B01212 (from clone DKFZp686B01212)
          Length = 2516

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 181  ggacgcagtgaggcagttcctggagcag 208
            |||| ||||||||||| |||||||||||
Sbjct: 2327 ggacacagtgaggcagctcctggagcag 2300
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>dbj|AK106449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E10, full
            insert sequence
          Length = 3083

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  gtgcatggcgaggacgcagt 189
            ||||||||||||||||||||
Sbjct: 2048 gtgcatggcgaggacgcagt 2029
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    gcggcggccgacttcgcctc 159
              ||||||||||||||||||||
Sbjct: 904610 gcggcggccgacttcgcctc 904591
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>emb|BX323070.7| Zebrafish DNA sequence from clone DKEY-45H7 in linkage group 18,
             complete sequence
          Length = 103856

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 331   cagctatgctgcatttattgaagc 354
             ||||||||||||||||||| ||||
Sbjct: 11371 cagctatgctgcatttattaaagc 11348
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>emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, complete sequence
          Length = 260341

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    gagctggaagccgtgttccg 138
              ||||||||||||||||||||
Sbjct: 185460 gagctggaagccgtgttccg 185441
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>gb|AC005562.1|AC005562 Homo sapiens chromosome 17, clone hRPK.271_K_11, complete sequence
          Length = 199182

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   tcagggagccgagcctgaga 263
             ||||||||||||||||||||
Sbjct: 74481 tcagggagccgagcctgaga 74500
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>dbj|AP000936.7| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-823O21, complete
              sequence
          Length = 219017

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 181    ggacgcagtgaggcagttcctggagcag 208
              |||| ||||||||||| |||||||||||
Sbjct: 216656 ggacacagtgaggcagctcctggagcag 216683
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>dbj|AP000892.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-94B1, complete
            sequence
          Length = 149843

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 181  ggacgcagtgaggcagttcctggagcag 208
            |||| ||||||||||| |||||||||||
Sbjct: 5776 ggacacagtgaggcagctcctggagcag 5749
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>dbj|AK112792.1| Ciona intestinalis cDNA, clone:cilv015p09, full insert sequence
          Length = 2780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 271 aactgttgcagcttgcttggacaa 294
           ||||||||||| ||||||||||||
Sbjct: 966 aactgttgcagattgcttggacaa 989
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>gb|U73638.1|U73638 Human Chromosome 11 Cosmid cSRL16b6, complete sequence
          Length = 34352

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 181   ggacgcagtgaggcagttcctggagcag 208
             |||| ||||||||||| |||||||||||
Sbjct: 18660 ggacacagtgaggcagctcctggagcag 18687
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>dbj|AP005018.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-109L13,
           complete sequences
          Length = 67000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 181 ggacgcagtgaggcagttcctggagcag 208
           |||| ||||||||||| |||||||||||
Sbjct: 551 ggacacagtgaggcagctcctggagcag 578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,498,853
Number of Sequences: 3902068
Number of extensions: 2498853
Number of successful extensions: 46039
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45783
Number of HSP's gapped (non-prelim): 256
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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