ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13e08 |
|---|---|
| Clone Library Name | barley_pub |
>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5| (Signal-responsive protein 6) (Ethylene-induced calmodulin-binding protein f) (EICBP.f) Length = 923 Score = 134 bits (337), Expect = 5e-32 Identities = 61/100 (61%), Positives = 79/100 (79%) Frame = +1 Query: 58 AGRERDPLLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDK 237 AG + L+ SEIHGF T DL+ + + EA SRW RPNEI+A+L NH+ F ++ +P++ Sbjct: 2 AGVDSGKLIGSEIHGFHTLQDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNL 61 Query: 238 PVSGTIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKL 357 P SGTIVL+DRK++RNFRKDGHNWKKKKDGKT++EAHE L Sbjct: 62 PKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHL 101
>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2| (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) Length = 1050 Score = 106 bits (265), Expect = 1e-23 Identities = 46/79 (58%), Positives = 64/79 (81%) Frame = +1 Query: 121 LNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDG 300 L+ ++L +EA RW RP EI +L NH++F + ++P ++P SG++ L+DRKV+R FRKDG Sbjct: 13 LDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDG 72 Query: 301 HNWKKKKDGKTVQEAHEKL 357 HNW+KKKDGKTV+EAHEKL Sbjct: 73 HNWRKKKDGKTVKEAHEKL 91
>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6| (Signal-responsive protein 3) (Ethylene-induced calmodulin-binding protein e) (EICBP.e) (Ethylene-induced calmodulin-binding protein 5) (EICBP5) Length = 838 Score = 103 bits (257), Expect = 1e-22 Identities = 51/93 (54%), Positives = 63/93 (67%) Frame = +1 Query: 79 LLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIV 258 L+ SEIHGF T DL+ + + EA SRW RPNEI+A+L G I+ Sbjct: 9 LIGSEIHGFHTLQDLDVQTMLEEAKSRWLRPNEIHAILC-----------------GRII 51 Query: 259 LYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKL 357 L+DRK++RNFRKDGHNWKKKKDG+TV+EAHE L Sbjct: 52 LFDRKMLRNFRKDGHNWKKKKDGRTVKEAHEHL 84
>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3| (Signal-responsive protein 1) (Ethylene-induced calmodulin-binding protein a) (EICBP.a) (Ethylene-induced calmodulin-binding protein 1) (EICBP1) Length = 1032 Score = 102 bits (254), Expect = 2e-22 Identities = 45/90 (50%), Positives = 65/90 (72%) Frame = +1 Query: 88 SEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYD 267 +E F +L+ ++ +EA RW RP EI +L N++RF++ +P P SG++ ++D Sbjct: 2 AEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFD 61 Query: 268 RKVVRNFRKDGHNWKKKKDGKTVQEAHEKL 357 RKV+R FRKDGHNW+KKKDGKTV+EAHE+L Sbjct: 62 RKVLRYFRKDGHNWRKKKDGKTVKEAHERL 91
>CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator 1| (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) Length = 1007 Score = 102 bits (254), Expect = 2e-22 Identities = 44/79 (55%), Positives = 61/79 (77%) Frame = +1 Query: 121 LNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDG 300 L+ E+L +EA RW RP EI +L N+ +F + ++ +P SG++ L+DRKV+R FRKDG Sbjct: 16 LDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDG 75 Query: 301 HNWKKKKDGKTVQEAHEKL 357 HNW+KKKDGKT++EAHEKL Sbjct: 76 HNWRKKKDGKTIREAHEKL 94
>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4| (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 Score = 80.1 bits (196), Expect = 1e-15 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = +1 Query: 136 LKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKK 315 L EA SRW +P E+ +L NHE + +P SG+++L++++V++ FRKDGH W++ Sbjct: 41 LYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRR 100 Query: 316 KKDGKTVQEAHEKL 357 K+DG+ + EAHE+L Sbjct: 101 KRDGRAIAEAHERL 114
>CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1| Length = 1673 Score = 60.1 bits (144), Expect = 1e-09 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Frame = +1 Query: 157 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 330 RW EI A L E+ + + P +P +G+++LY+RK V+ +RKDG+ WKK+KDGK Sbjct: 73 RWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVK-YRKDGYCWKKRKDGK 131 Query: 331 TVQEAHEKL 357 T +E H KL Sbjct: 132 TTREDHMKL 140
>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2| Length = 1208 Score = 59.3 bits (142), Expect = 2e-09 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +1 Query: 157 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 330 RW EI + L E+ + P +P +G+I+LY+RK V+ +RKDG+ WKK+KDGK Sbjct: 40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGK 98 Query: 331 TVQEAHEKL 357 T +E H KL Sbjct: 99 TTREDHMKL 107
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 59.3 bits (142), Expect = 2e-09 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +1 Query: 157 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 330 RW EI + L E+ + P +P +G+I+LY+RK V+ +RKDG+ WKK+KDGK Sbjct: 40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGK 98 Query: 331 TVQEAHEKL 357 T +E H KL Sbjct: 99 TTREDHMKL 107
>HSF3_CHICK (P38531) Heat shock factor protein 3 (HSF 3) (Heat shock| transcription factor 3) (HSTF 3) (HSF 3C) (HSTF 3C) Length = 467 Score = 31.2 bits (69), Expect = 0.65 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +1 Query: 4 NRPTGKVEXXXXXXMEGTAGRERDPLL-RSEIHGFITYADLNFEKLKAEAASRWF 165 N P V E +G + DPLL R EI F+ D + E+L+A + + + Sbjct: 333 NAPEDPVSVIDSILNENNSGNQNDPLLDREEIQDFLNCIDASLEELQAMLSGKQY 387
>SAT3_ARATH (Q39218) Serine acetyltransferase 3, mitochondrial precursor (EC| 2.3.1.30) (AtSAT-3) (SAT-m) (AtSERAT2;2) Length = 376 Score = 28.5 bits (62), Expect = 4.2 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 10/110 (9%) Frame = +1 Query: 58 AGRERDPLLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANH---ERFKVHAQP 228 A +ERDP S +H F+ + + A W + +I A+L + E F V P Sbjct: 188 AVKERDPACISYVHCFLHFKGFLACQAHRIAHELWTQDRKILALLIQNRVSEAFAVDFHP 247 Query: 229 IDKPVSG-------TIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKL 357 K +G IV+ + VV N HN GK + H K+ Sbjct: 248 GAKIGTGILLDHATAIVIGETAVVGNNVSILHNVTLGGTGKQCGDRHPKI 297
>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E| Length = 336 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 5/33 (15%) Frame = +1 Query: 178 IYAVLANHERFKVHAQPIDK-----PVSGTIVL 261 + AVLAN E F +H +DK P+SGT ++ Sbjct: 30 VLAVLANSEGFNLHCNNLDKTVLELPMSGTFLV 62
>YKX1_SCHPO (O14116) Hypothetical protein C328.01c in chromosome I| Length = 1234 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -3 Query: 340 LGQFCHPSFSSNYGHPSESSGQ 275 LG+FC + S+ + HPSE GQ Sbjct: 764 LGRFCEATCSNKHIHPSEFEGQ 785
>PFLE_ECOLI (P75794) Putative pyruvate formate-lyase 3-activating enzyme (EC| 1.97.1.4) (PFL-activating enzyme 3) (Formate-C-acetyltransferase-activating enzyme 3) Length = 308 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 Query: 260 RTIVPLTGLSMGCAWTLNLSWFART 186 RT+V L G S+GC W N ART Sbjct: 26 RTVVFLKGCSLGCRWCQNPESRART 50
>TDT_ONCMY (Q92089) DNA nucleotidylexotransferase (EC 2.7.7.31) (Terminal| addition enzyme) (Terminal deoxynucleotidyltransferase) (Terminal transferase) Length = 501 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%) Frame = +1 Query: 79 LLRSEIHGFITYADLNFEKLKAEAAS---------RWFRPNEIYAVLANHERFKVHAQPI 231 L R + GF+ Y+D++ KAEA + W P+ I A+ R K + + Sbjct: 276 LNRMQRAGFLYYSDISKAVSKAEAKAVGCIIEDTFHWIAPDAILALTGGFRRGKEYGHDV 335 Query: 232 D 234 D Sbjct: 336 D 336
>E75BA_DROME (P17672) Ecdysone-induced protein 75B isoform A (E75-B)| Length = 1355 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 135 LLEVQVCVGDEAVDLGA*ERVPLPPGRPLHS 43 LLE+QV + D A L ++ P PP LH+ Sbjct: 1263 LLELQVDIADSAQPLNLSKKSPTPPPSKLHA 1293
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 135 LLEVQVCVGDEAVDLGA*ERVPLPPGRPLHS 43 LLE+QV + D A L ++ P PP LH+ Sbjct: 1107 LLELQVDIADSAQPLNLSKKSPTPPPSKLHA 1137
>TOF1_YEAST (P53840) Topoisomerase 1-associated factor 1| Length = 1238 Score = 27.3 bits (59), Expect = 9.4 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 5/82 (6%) Frame = +1 Query: 88 SEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFK--VHAQPIDKP---VSGT 252 S + +T A KL + R N I A H RF + Q DK VSG+ Sbjct: 322 SSANNIVTSAGFELSKLLQK--EHQMRKNVIKHTSARHSRFGGLLSIQTPDKTRLTVSGS 379 Query: 253 IVLYDRKVVRNFRKDGHNWKKK 318 L D K+ D W K+ Sbjct: 380 QALVDEKIALQKLDDSKKWNKR 401
>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)| Length = 1412 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 135 LLEVQVCVGDEAVDLGA*ERVPLPPGRPLHS 43 LLE+QV + D A L ++ P PP LH+ Sbjct: 1320 LLELQVDIADSAQPLNLSKKSPTPPPSKLHA 1350
>DUT_CLODI (O30931) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 143 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -1 Query: 111 GDEAVDLGA*ERVPLPPGRPLHSRRGCCFHFP 16 GD +DL + E V +PPG + G C P Sbjct: 22 GDAGMDLYSIEEVVIPPGETKLIKTGICIELP 53
>DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial| DNA polymerase catalytic subunit) (PolG-alpha) Length = 1239 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%) Frame = +1 Query: 124 NFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQ----------PIDKPVSGTIVLYDRK 273 N + EAA + ++YAV R+++ A P+D+ G + L D + Sbjct: 949 NHRLTRQEAAEK---AQQMYAVTKGLRRYRLSADGEWLVKQLNLPVDRTEDGWVSLQDLR 1005 Query: 274 VVRNFRKDGHNWKK 315 ++R WKK Sbjct: 1006 MIRREASRKSRWKK 1019 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,549,916 Number of Sequences: 219361 Number of extensions: 870324 Number of successful extensions: 2373 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2320 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2371 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
