>dbj|AK108706.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-A06, full
           insert sequence
          Length = 1517

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 196 gaatggcgcagagcaattgggaagcggataagatgctcggtgtgtatatctacgactact 255
           |||||||||||||||| |||||||||||||||||||| | |||||||||||| ||||| |
Sbjct: 364 gaatggcgcagagcaactgggaagcggataagatgcttgatgtgtatatctatgactatt 423

                      
Query: 256 tgctcaagcgg 266
           |||| ||||||
Sbjct: 424 tgctgaagcgg 434

>ref|XM_473135.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2382

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 198 atggcgcagagcaattgggaagcggataagatgctcggtgtgtatatctacgactacttg 257
           |||||||||||||| |||||||||||||||||||| | |||||||||||| ||||| |||
Sbjct: 1   atggcgcagagcaactgggaagcggataagatgcttgatgtgtatatctatgactatttg 60

                    
Query: 258 ctcaagcgg 266
           || ||||||
Sbjct: 61  ctgaagcgg 69

>ref|XM_468366.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3146

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 198 atggcgcagagcaattgggaagcggataagatgctcggtgtgtatatctacgacta 253
           |||||||||||||| |||||||| ||||||||||| | |||||||||||| |||||
Sbjct: 338 atggcgcagagcaactgggaagcagataagatgcttgatgtgtatatctatgacta 393

>dbj|AK103520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131I05, full
           insert sequence
          Length = 3146

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 198 atggcgcagagcaattgggaagcggataagatgctcggtgtgtatatctacgacta 253
           |||||||||||||| |||||||| ||||||||||| | |||||||||||| |||||
Sbjct: 338 atggcgcagagcaactgggaagcagataagatgcttgatgtgtatatctatgacta 393

>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13,
             complete sequence
          Length = 103039

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 191   cagccgaatggcgcagagcaattgggaagcggataagatg 230
             |||| |||||||||||||||| ||||||||||||||||||
Sbjct: 78064 cagcggaatggcgcagagcaactgggaagcggataagatg 78103

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 191      cagccgaatggcgcagagcaattgggaagcggataagatg 230
                |||| |||||||||||||||| ||||||||||||||||||
Sbjct: 25500571 cagcggaatggcgcagagcaactgggaagcggataagatg 25500610



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 239      gtatatctacgactacttgc 258
                ||||||||||||||||||||
Sbjct: 24382010 gtatatctacgactacttgc 24382029

>emb|AJ620906.1| Antirrhinum majus mRNA for STY-L protein
          Length = 2865

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 198 atggcgcagagcaattgggaagcggataagatgct 232
           ||||||||||| |||||||||||||||||||||||
Sbjct: 230 atggcgcagagtaattgggaagcggataagatgct 264

>ref|XM_470511.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2602

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 198 atggcgcagagcaattgggaagcggataagatgctcggtgtgtatatctacgactac 254
           ||||||| |||||||||||| || || |||||||| | |||||| ||||||||||||
Sbjct: 248 atggcgcggagcaattgggaggcagacaagatgctggatgtgtacatctacgactac 304

>dbj|AK111575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H15, full
           insert sequence
          Length = 2812

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 198 atggcgcagagcaattgggaagcggataagatgctcggtgtgtatatctacgactac 254
           ||||||| |||||||||||| || || |||||||| | |||||| ||||||||||||
Sbjct: 189 atggcgcggagcaattgggaggcagacaagatgctggatgtgtacatctacgactac 245

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 198      atggcgcagagcaattgggaagcggataagatg 230
                |||||||||||||| |||||||| |||||||||
Sbjct: 34890932 atggcgcagagcaactgggaagcagataagatg 34890900

>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0053L11
          Length = 147123

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 198    atggcgcagagcaattgggaagcggataagatg 230
              |||||||||||||| |||||||| |||||||||
Sbjct: 112527 atggcgcagagcaactgggaagcagataagatg 112495

>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_E04
          Length = 118192

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 198   atggcgcagagcaattgggaagcggataagatg 230
             |||||||||||||| |||||||| |||||||||
Sbjct: 50429 atggcgcagagcaactgggaagcagataagatg 50397

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 126     ccgtcggccgccccgtcgccc 146
               |||||||||||||||||||||
Sbjct: 3464141 ccgtcggccgccccgtcgccc 3464161

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      cagcgagccgcggccgatcg 118
               ||||||||||||||||||||
Sbjct: 1719943 cagcgagccgcggccgatcg 1719924

>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cagcgagccgcggccgatcg 118
             ||||||||||||||||||||
Sbjct: 22685 cagcgagccgcggccgatcg 22704

>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30,
             complete sequence
          Length = 141128

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   gtatatctacgactacttgc 258
             ||||||||||||||||||||
Sbjct: 98421 gtatatctacgactacttgc 98440

>gb|U75363.1|RPU75363 Rhodopseudomonas palustris cyclohex-1-ene-1-carboxyl-CoA hydratase
            (badk), cyclohex-1-ene-1-carboxylate CoA ligase (aliA),
            cyclohexanecarboxyl-CoA dehydrogenase (badJ),
            2-ketocyclohexanecarboxyl-CoA hydrolase (badI), putative
            2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (badH),
            putative regulatory protein (badR), putative
            NADPH:quinone oxidoreductase (badC), and benzoyl-CoA
            reductase subunits (badD), (badE), (badF) and (badG)
            genes, complete cds
          Length = 12058

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cagcgagccgcggccgatcg 118
            ||||||||||||||||||||
Sbjct: 3027 cagcgagccgcggccgatcg 3046

>dbj|AP001360.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831A10, complete
              sequence
          Length = 190766

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    tggcgcagagcaattgggaa 218
              ||||||||||||||||||||
Sbjct: 112643 tggcgcagagcaattgggaa 112624

>dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-713N19, complete
             sequences
          Length = 207785

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   ggccgcgggaccgcccccagccga 197
             ||||||||| ||||||||||||||
Sbjct: 64993 ggccgcggggccgcccccagccga 65016


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 610,991
Number of Sequences: 3902068
Number of extensions: 610991
Number of successful extensions: 8999
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8895
Number of HSP's gapped (non-prelim): 104
length of query: 266
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 244
effective length of database: 17,147,199,772
effective search space: 4183916744368
effective search space used: 4183916744368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)