>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +3

Query: 144 LFRTKRVAEIREVEAATRREISAKEEELRQLVGRSYR 254
           LF T    EIR +E   R EI  K+EELRQ+VG  YR
Sbjct: 21  LFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYR 57

>COG1_HUMAN (Q8WTW3) Conserved oligomeric Golgi complex component 1|
          Length = 980

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +3

Query: 144 LFRTKRVAEIREVEAATRREISAKEEELRQLVGRSYR 254
           LF T    EIR +E   R EI  K+EELRQ+VG  YR
Sbjct: 21  LFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYR 57

>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 138  EELFRTKRVAEIREVEAATRREISAKEEELRQLVGRSYR 254
            E L R +R  ++RE E   RRE    E+ELRQ   R +R
Sbjct: 971  ERLRRQERARKLREEEQLLRRE----EQELRQERDRKFR 1005

>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)|
          Length = 4687

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +3

Query: 153  TKRVAEIREVEAATRREISAKEEELRQ 233
            T R  E+ E EAA +R+++A+EE+ R+
Sbjct: 2098 TMRSKELAEQEAARQRQLAAEEEQRRR 2124

>PTM3C_KLEPN (Q9XBM7) PTS system mannitol-specific EIICBA component (EIICBA-Mtl)|
           (EII-Mtl) [Includes: Mannitol permease IIC component
           (PTS system mannitol-specific EIIC component);
           Mannitol-specific phosphotransferase enzyme IIB
           component (EC 2.7.1.69) (P
          Length = 635

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 144 LFRTKRVAEIREVEAATRREISAKEE 221
           LF+T +V E  ++EAATRR    K E
Sbjct: 333 LFKTSKVKERSDIEAATRRMHDMKAE 358


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,658,777
Number of Sequences: 219361
Number of extensions: 67690
Number of successful extensions: 385
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)