>VCAP_SHV21 (Q00999) Major capsid protein (MCP)|
          Length = 1371

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   LHPTQPVFSSAHEAAARMSEWRSNHRHK**NIPPPNSQRPSQE 129
           +HP   V++  H+ AA   ++R+ HR+   N+PPP +    QE
Sbjct: 532 VHPFFDVYAERHQGAA--VQYRATHRNLSGNLPPPLAPYSFQE 572

>HEPA_HHV11 (P10192) DNA helicase/primase complex-associated protein|
          Length = 750

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 274 AWPAVGSECEAAILVWAGV*SVWERWVMPAARRVL 378
           AWPAVG+        W GV S     ++PA R  +
Sbjct: 347 AWPAVGARVVLPPRAWPGVASAAAGCLLPAVREAV 381


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,932,936
Number of Sequences: 219361
Number of extensions: 737171
Number of successful extensions: 1970
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1968
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)