>RIMS1_MOUSE (Q99NE5) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1) (Rab3-interacting
           protein 1) (Fragment)
          Length = 388

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -2

Query: 84  LLEAGEGGVEERKGKARNETRRMETG 7
           +++ GEG  +ER+ K R ETRR+E G
Sbjct: 319 VVQPGEGTADERERKERRETRRLEKG 344

>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -2

Query: 84  LLEAGEGGVEERKGKARNETRRMETG 7
           +++ GEG  +ER+ K R ETRR+E G
Sbjct: 319 VVQPGEGIADERERKERRETRRLEKG 344

>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated|
           protein 10.5) (High sulfur keratin-associated protein
           10.5) (Keratin-associated protein 18-5)
           (Keratin-associated protein 18.5)
          Length = 271

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 17/65 (26%)
 Frame = +2

Query: 212 SCCTSGD*CVPLSDLGIILR--------AAILKCSVPA*RY---------CFSMLCALLC 340
           +CCT+   C P S + ++ R          I  C  PA  Y         C S+LC   C
Sbjct: 208 ACCTTSC-CRPSSSVSLLCRPICRPACCVPISSCCAPASSYQASCCRPASCVSLLCRPAC 266

Query: 341 SPFCC 355
           SP  C
Sbjct: 267 SPLAC 271



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 317 SMLCALLCSPFCCLPLRS 370
           S+LC  +C P CC+P+ S
Sbjct: 222 SLLCRPICRPACCVPISS 239

>RIMS1_HUMAN (Q86UR5) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1692

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -2

Query: 69  EGGVEERKGKARNETRRMETG 7
           EG VEER+ K R E+RR+E G
Sbjct: 302 EGAVEERERKERRESRRLEKG 322

>Y4YR_RHISN (P55726) Probable translocation protein y4yR|
          Length = 697

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 1   LVSC-LHPSGFVPGFPLPLFHPTFACF 78
           L +C L   GFVPGFPLP+F    A F
Sbjct: 287 LAACVLVAMGFVPGFPLPVFFMLAAVF 313

>SYA_BUCBP (P59420) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 880

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 223 IRRLVRSTIRPGYHSACGHPEVLGAGIALLFLHALCPPLFAFLLSSSPVI 372
           +RR++R  IR G++           GI  LFLH L P L   +   +PV+
Sbjct: 310 LRRIIRRAIRHGHN----------LGIKSLFLHKLIPTLINTMGKFNPVL 349

>PUR2_YEAST (P07244) Bifunctional purine biosynthetic protein ADE5,7 [Includes:|
           Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase);
           Phosphoribosylformylglycinamidine cycl
          Length = 802

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 205 NNLVLHIRRLVRSTIRPGYHSACG 276
           NNLV  I+ +VRST RPG  S  G
Sbjct: 463 NNLVQTIKEMVRSTRRPGADSDIG 486

>RIR1_HHV23 (P09853) Ribonucleoside-diphosphate reductase large chain (EC|
           1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit)
          Length = 1144

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 214 VLHIRRLVRSTIRPGYHSACGHPEVLGAGIALLFLHALC 330
           VL +  ++ ST++P    A GH  +   GI +  LH  C
Sbjct: 844 VLMVNIMIDSTLQPTPQCARGHDNLRSMGIGMQGLHTAC 882

>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated|
           protein 10.1) (High sulfur keratin-associated protein
           10.1) (Keratin-associated protein 18-1)
           (Keratin-associated protein 18.1)
          Length = 282

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 317 SMLCALLCSPFCCLPLRS 370
           S+LC  +C P CC+P+ S
Sbjct: 233 SLLCRPVCRPACCMPVSS 250

>Y675_TREPA (O83681) Hypothetical protein TP0675|
          Length = 332

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 263 ILRAAILK-CSVPA*RYCFSMLCALLCSPF--CCLPL 364
           +LR  +LK CS+ A R     LC LL  PF  CC  L
Sbjct: 11  LLRRTVLKRCSLCATRCAIVFLCVLLILPFLSCCTSL 47

>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated|
           protein 10.11) (High sulfur keratin-associated protein
           10.11) (Keratin-associated protein 18-11)
           (Keratin-associated protein 18.11)
          Length = 298

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
 Frame = +2

Query: 173 CKETNSWLLIRTISCCTSGD*CVPLSDLGIILRAAILKCSVPA*RYC------------F 316
           C  ++S+     +  C     C P+  + +  RA+  +C  P+ +               
Sbjct: 178 CCTSSSYQQACCVPVCCKTVYCKPICCVPVCSRASYSRCQQPSCQPACCTTSCCRPSSSV 237

Query: 317 SMLCALLCSPFCCLPLRS 370
           S+LC  +C   CC+P+ S
Sbjct: 238 SLLCHPVCRSTCCVPVSS 255

>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated|
           protein 10.9) (High sulfur keratin-associated protein
           10.9) (Keratin-associated protein 18-9)
           (Keratin-associated protein 18.9)
          Length = 292

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 317 SMLCALLCSPFCCLPLRS 370
           S+LC  +C P CC+P+ S
Sbjct: 232 SLLCRPVCRPACCVPVSS 249

>CCDC9_MOUSE (Q8VC31) Coiled-coil domain-containing protein 9|
          Length = 543

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 96  GNPRLLEAGEGGVEERKGKARNETRR 19
           G+P LL AG+    +RK K   E RR
Sbjct: 134 GSPHLLGAGDNSTSDRKSKEWEERRR 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,207,534
Number of Sequences: 219361
Number of extensions: 868467
Number of successful extensions: 2197
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)