ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13c11 |
|---|---|
| Clone Library Name | barley_pub |
>RIR1_ARATH (Q9SJ20) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase R1 subunit) (AtRNR1) Length = 816 Score = 193 bits (491), Expect = 1e-49 Identities = 96/117 (82%), Positives = 100/117 (85%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYVVKRDGR ETVHFDKITARLKKLSYGLS +HCDPVLVAQKVCAGVYKGVTTSQLD Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 +HPDYASLAARIAVSNLHKNTKKSFSETIKDM+ H N+RSGL SPLIA Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIA 117
>RIR1_NEUCR (Q9UW15) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase large subunit) Length = 929 Score = 135 bits (341), Expect = 3e-32 Identities = 68/117 (58%), Positives = 80/117 (68%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYV KRDGR E V FDKITAR+ +L YGL H DPV + QKV +GVY GVTT+QLD Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 +HPDYA LAARIAVSNLHK TKK +S I ++Y + N R+G SP+IA Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIA 117
>RIR1_VARV (P32984) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 132 bits (331), Expect = 5e-31 Identities = 62/117 (52%), Positives = 82/117 (70%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FSE +KD++ + N ++G SP+I+ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIIS 117
>RIR1_CAEEL (Q03604) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleotide reductase large chain) Length = 788 Score = 130 bits (327), Expect = 1e-30 Identities = 64/116 (55%), Positives = 82/116 (70%) Frame = +1 Query: 94 YVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXX 273 YVVKRDGR E VHFDKIT+R++KLSYGL+ + DPV VA KV +G+YKGVTT +LD Sbjct: 8 YVVKRDGRKEDVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67 Query: 274 XXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HP+YA LAARIAVSNLHK T K FSE +K ++ ++ +G +P+I+ Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMIS 123
>RIR1_VACCV (P12848) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (327), Expect = 1e-30 Identities = 61/117 (52%), Positives = 82/117 (70%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FSE ++D++ + N ++G SP+I+ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIIS 117
>RIR1_VACCC (P20503) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (327), Expect = 1e-30 Identities = 61/117 (52%), Positives = 82/117 (70%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FSE ++D++ + N ++G SP+I+ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIIS 117
>RIR1_VACCA (Q76RD8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (327), Expect = 1e-30 Identities = 61/117 (52%), Positives = 82/117 (70%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FSE ++D++ + N ++G SP+I+ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIIS 117
>RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 812 Score = 129 bits (324), Expect = 3e-30 Identities = 61/118 (51%), Positives = 81/118 (68%) Frame = +1 Query: 88 KMYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXX 267 K+YV+KRDGR E VHFDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD Sbjct: 11 KLYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNL 70 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 +HPDYA LAARIAVSNLHK TKK+FS+ +D+Y H N+ + PL++ Sbjct: 71 AAEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVS 128
>RIR1_MOUSE (P07742) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 128 bits (322), Expect = 5e-30 Identities = 61/117 (52%), Positives = 79/117 (67%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KRDGR E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FS+ ++D+Y + N +G SP++A Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVA 117
>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 128 bits (322), Expect = 5e-30 Identities = 61/117 (52%), Positives = 79/117 (67%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KRDGR E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FS+ ++D+Y + N +G SP++A Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVA 117
>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 1) (Ribonucleotide reductase R1 subunit 1) Length = 888 Score = 128 bits (322), Expect = 5e-30 Identities = 61/117 (52%), Positives = 80/117 (68%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYV KRDGR E V FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G +P+I+ Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMIS 117
>RIR1_SCHPO (P36602) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 811 Score = 123 bits (309), Expect = 2e-28 Identities = 60/117 (51%), Positives = 78/117 (66%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V KRDGR E V FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT +LD Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK T+K FS ++ ++ + N ++ +P+I+ Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMIS 117
>RIR1_BRARE (P79732) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) (Ribonucleotide reductase protein R1 class I) Length = 794 Score = 123 bits (308), Expect = 2e-28 Identities = 60/117 (51%), Positives = 77/117 (65%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 M+V+KRDG E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD Sbjct: 1 MHVIKRDGGQEGVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA LAARIAVSNLHK TKK FSE ++D+Y + N + SP+I+ Sbjct: 61 AETAATSTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMIS 117
>RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large chain 2 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 2) (Ribonucleotide reductase DNA damage-inducible regulatory subunit 2) (Ribonucleotide reductase R1 subunit 2) Length = 869 Score = 122 bits (307), Expect = 3e-28 Identities = 60/117 (51%), Positives = 78/117 (66%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYV+KRDGR E V FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDYA+LAARIA+SNLHK T K FS+ I+D++ N +G +P+I+ Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMIS 117
>RIR1_CRYPV (O61065) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 803 Score = 92.4 bits (228), Expect = 4e-19 Identities = 49/117 (41%), Positives = 66/117 (56%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYVV R G E V FD+I +R+ KLSYGL DP V Q V G+Y G+ TS+LD Sbjct: 1 MYVVNRKGEEEPVSFDQILSRITKLSYGL-HPLVDPARVTQAVINGLYSGIKTSELDELA 59 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 +H D++ LAARI+ SNLHKNT + +Y ++ + G +PLI+ Sbjct: 60 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLY-NFKDNQGCPAPLIS 115
>RIR1_PLAF4 (P50648) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 806 Score = 87.0 bits (214), Expect = 2e-17 Identities = 44/108 (40%), Positives = 61/108 (56%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYV+ R G E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LD Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGL-HELVDPARVTQGVINGMYSGIKTCELDELA 59 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNER 414 +HPD++ LAARI NLHKNT +E + +Y + + R Sbjct: 60 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTYKDVR 107
>RIR1_PLAFG (P50647) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 804 Score = 82.4 bits (202), Expect = 5e-16 Identities = 41/108 (37%), Positives = 59/108 (54%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 270 MYV+ R G E + FD+I R+++LSYGL + P V Q V G+Y + T +LD Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLHKLGEYPACVTQGVINGMYSSIKTCELDELA 60 Query: 271 XXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNER 414 +HPD++ LAARI NLHKNT +E + +Y + + R Sbjct: 61 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTYKDGR 108
>RIR1_TRYBB (O15909) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 838 Score = 64.7 bits (156), Expect = 1e-10 Identities = 36/115 (31%), Positives = 59/115 (51%) Frame = +1 Query: 97 VVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXX 276 V KRDG E + +R+ L G+ + D + + V GV +G++TS LD Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67 Query: 277 XXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 HPDY LA R+AV+ LHK T +S ++ + ++ H ++ + +PLI+ Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLIS 122
>RIR1_BUCAI (P57276) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 761 Score = 45.1 bits (105), Expect = 8e-05 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQ-KVCAGV--YKGVTTSQL- 258 ++V KRDGR E ++ DKI L S GL D V V+Q ++C+ + Y +TT + Sbjct: 5 LFVTKRDGRKEKINLDKIHKVLNWASEGL-----DDVSVSQVELCSRIQFYNNITTINIH 59 Query: 259 DXXXXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSF 372 + PDY +AAR+A+ +L K F Sbjct: 60 ETIIKAAADLISQDTPDYQYMAARLAIFHLRKKAYGQF 97
>RIR1_SALTY (P37426) Ribonucleoside-diphosphate reductase 1 alpha subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase 1 R1 subunit) (Ribonucleotide reductase 1) (B1 protein) Length = 761 Score = 44.3 bits (103), Expect = 1e-04 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 267 + V KRDGRTE ++ DKI L + GL+ V + + Y G+ TS + + Sbjct: 5 LLVTKRDGRTERINLDKIHRVLDWAAEGLNNVSVSQVELRSHI--QFYDGIKTSDIHETI 62 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSF 372 PDY LAAR+A+ +L K F Sbjct: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQF 97
>RIR1_ENCCU (Q8SR37) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 768 Score = 44.3 bits (103), Expect = 1e-04 Identities = 24/96 (25%), Positives = 45/96 (46%) Frame = +1 Query: 115 RTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXXXXXXXX 294 ++E + D I +R++ L H D + +++ +G + +T + Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70 Query: 295 XSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLH 402 HP+Y +++RI VS +H+ T SF E IK + H Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKH 106
>RIR1_ECOLI (P00452) Ribonucleoside-diphosphate reductase 1 alpha subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase 1 R1 subunit) (Ribonucleotide reductase 1) (B1 protein) Length = 761 Score = 41.6 bits (96), Expect = 9e-04 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 267 + V KRDG TE ++ DKI L + GL V + + Y G+ TS + + Sbjct: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHETI 62 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSF 372 PDY LAAR+A+ +L K F Sbjct: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQF 97
>RIR1_AQUAE (O66503) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 801 Score = 40.4 bits (93), Expect = 0.002 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 267 MYV+KR GR E + +KI +K GL + DP+ + G+TT ++ Sbjct: 3 MYVIKRSGRKEKLDINKIRIAIKFACEGL---NVDPLELEADAQIQFRDGITTKEIQQLL 59 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKD---MYLHYNERS 417 PD+ AAR+ + +L+K+ +++D Y YN ++ Sbjct: 60 IKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKN 112
>RIR1_HAEIN (P43754) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 756 Score = 39.7 bits (91), Expect = 0.003 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 267 + V KRDG E ++ DKI + + GL V + + Y+G+ TS + + Sbjct: 5 LMVTKRDGTQEQINLDKIHRVITWAAEGLDNVSVSQVELRSHI--QFYEGIRTSDIHETI 62 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSF 372 PDY LAAR+A+ +L K F Sbjct: 63 IKAAADLISKDSPDYQYLAARLAIFHLRKKAYGHF 97
>RIR1_MIMIV (Q7T6Y8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 881 Score = 38.5 bits (88), Expect = 0.007 Identities = 25/111 (22%), Positives = 48/111 (43%) Frame = +1 Query: 109 DGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXXXXXX 288 +G + + + I ++K+ + H D + + + + T +D Sbjct: 75 NGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIISTASE 134 Query: 289 XXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIA 441 H DY +A I ++NLH NT F ET + +Y + +E S +P+I+ Sbjct: 135 MVTDHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSE-SNKNAPIIS 184
>RIR1_BUCAP (Q8K9W3) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 763 Score = 38.5 bits (88), Expect = 0.007 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 267 ++V KR+G+ E ++ DKI L + GL V + ++ Y ++T + + Sbjct: 5 LFVTKRNGKKEKINLDKIHKVLNWAAKGLENISVSQVELRSRI--QFYNNISTVNIHETI 62 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLH 402 + PDY +AAR+A+ +L K F ++Y H Sbjct: 63 IKAAADLISENTPDYQYMAARLAIFHLRKKAYGQFEP--PNLYYH 105
>Y832_METJA (Q58242) Hypothetical protein MJ0832 [Contains: Mja rnr-1 intein;| Mja rnr-2 intein] Length = 1750 Score = 37.7 bits (86), Expect = 0.013 Identities = 20/57 (35%), Positives = 34/57 (59%) Frame = +1 Query: 88 KMYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL 258 + YV+KRD R E + +K+ L ++ G++ D ++ +VCA VY G+TT +L Sbjct: 13 EFYVIKRDKRKEKFNVNKLAKSL--INSGVNYGDLDTII--SEVCAKVYNGITTDEL 65
>RIR1_BUCBP (Q89AS4) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 761 Score = 37.0 bits (84), Expect = 0.022 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Frame = +1 Query: 91 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 267 ++V KR+G+ E ++ DKI L + GL E+ VA K Y + T+ + + Sbjct: 5 LFVTKRNGKIELINLDKIHRVLNWAAKGL--ENISISQVALKSRIQFYNNIKTTIIHETI 62 Query: 268 XXXXXXXXXXSHPDYASLAARIAVSNLHKNTKKSFS 375 + PDY +AAR+ + +L K F+ Sbjct: 63 IKAAADLISENSPDYQYMAARLTIFHLRKKAFGQFN 98
>RIR1_CHLTR (O84834) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 36.2 bits (82), Expect = 0.037 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 2/108 (1%) Frame = +1 Query: 97 VVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXX 276 V+ +DG T T+ ++ A L + + E D L+ A Y G+ S++ Sbjct: 239 VLSKDGSTYTMTHSQLLAHLAR-ACSRFPETTDAALLTDMAFANFYSGIKESEVVLACIM 297 Query: 277 XXXXXXXSHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYLHYNER 414 PDYA +AA + + ++K K ++E ++ + + +R Sbjct: 298 AARANIEKEPDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHRDHFKR 345
>RIR1_ASFB7 (P42491) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 778 Score = 35.4 bits (80), Expect = 0.063 Identities = 14/29 (48%), Positives = 23/29 (79%) Frame = +1 Query: 301 HPDYASLAARIAVSNLHKNTKKSFSETIK 387 H DY++LAAR++V LH++T SFS+ ++ Sbjct: 48 HYDYSTLAARLSVYQLHQSTASSFSKAVR 76
>RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 33.9 bits (76), Expect = 0.18 Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 2/108 (1%) Frame = +1 Query: 97 VVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXX 276 V+ +DG T + ++ ARL + + E D L+ + Y G+ S++ Sbjct: 239 VLSKDGSTYMITHSQLLARLAR-ACSRFPETTDAALLTDMAFSNFYSGIKESEVVLACIM 297 Query: 277 XXXXXXXSHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYLHYNER 414 PDYA +AA + + ++K + E ++ +Y + +R Sbjct: 298 AARANIEKEPDYAFVAAELLLDVVYKEALDRSRGDEDLEQVYRDHFKR 345
>RIR1_ASFM2 (P26685) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 779 Score = 33.5 bits (75), Expect = 0.24 Identities = 14/28 (50%), Positives = 22/28 (78%) Frame = +1 Query: 301 HPDYASLAARIAVSNLHKNTKKSFSETI 384 H DY++LAAR++V LH++T SFS+ + Sbjct: 49 HYDYSTLAARLSVYLLHQSTASSFSKAV 76
>RIR1_CHLPN (Q9Z6S5) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1044 Score = 31.6 bits (70), Expect = 0.91 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Frame = +1 Query: 94 YVV-KRDGRTETVHFDKITARLKKLSYGLSQ--EHCDPVLVAQKVCAGVYKGVTTSQLDX 264 YVV K DG T + + T K+ S+ + + D L+A +Y G+ ++ Sbjct: 235 YVVQKEDG---TTYLLRKTDLEKRFSWACKRFPKTTDSQLLADMAFMNLYSGIKEDEVTT 291 Query: 265 XXXXXXXXXXXSHPDYASLAARIAVSNLHKNT 360 PDYA +AA + S+L++ T Sbjct: 292 ACIMAARANIEREPDYAFIAAELLTSSLYEET 323
>FLGK_BUCAI (P57428) Flagellar hook-associated protein 1 (HAP1)| Length = 543 Score = 31.2 bits (69), Expect = 1.2 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +1 Query: 298 SHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNE 411 +HP+ +L R+ + N +N K+ + +K++Y +YN+ Sbjct: 27 NHPNNKTLGKRVVIENTVQNENKNSTVKVKEIYDNYND 64
>PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor A-interacting| complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DBD-interacting protein 1) (PDIP1) Length = 2649 Score = 28.9 bits (63), Expect = 5.9 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 437 ISGDSSPDLSL*CRYMSLIVSEKDFLVFLCRLDT 336 +SGD +P+ L R + ++ ++ L F+CR+DT Sbjct: 1177 LSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDT 1210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,945,155 Number of Sequences: 219361 Number of extensions: 409300 Number of successful extensions: 1364 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1355 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
