>ref|XM_472439.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2277

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 311 atgccaagatccaactcagacagggatgatatcttctttgatgcattggatgat 364
           |||||||| ||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1   atgccaagttccgaatcagacagggatgatatcttctttgatgcatttgatgat 54

>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                   
Query: 311   atgccaagatccaactcagacagggatgatatcttctttgatgcattggatgat 364
             |||||||| ||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 86963 atgccaagttccgaatcagacagggatgatatcttctttgatgcatttgatgat 86910

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                      
Query: 311      atgccaagatccaactcagacagggatgatatcttctttgatgcattggatgat 364
                |||||||| ||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 20652529 atgccaagttccgaatcagacagggatgatatcttctttgatgcatttgatgat 20652476

>dbj|AK067483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108P06, full
           insert sequence
          Length = 2652

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 311 atgccaagatccaactcagacagggatgatatcttctttgatgcattggatgat 364
           |||||||| ||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 342 atgccaagttccgaatcagacagggatgatatcttctttgatgcatttgatgat 395

>ref|XM_760294.1| Theileria parva strain Muguga hypothetical protein (TP02_0819)
           partial mRNA
          Length = 1083

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 344 ttctttgatgcattggatgat 364
           |||||||||||||||||||||
Sbjct: 349 ttctttgatgcattggatgat 369

>ref|XM_970561.1| PREDICTED: Tribolium castaneum similar to CG15319-PB (LOC664565),
            mRNA
          Length = 7038

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 22   aaccccaatcccgagctccaaccggaacg 50
            ||||||||||| |||||||| ||||||||
Sbjct: 1097 aaccccaatccggagctccatccggaacg 1125

>emb|BX571871.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             13/17
          Length = 349944

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   gaagatgacattttgatcact 237
             |||||||||||||||||||||
Sbjct: 83221 gaagatgacattttgatcact 83201

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     ggccggacgcgacgccgtcaa 162
               |||||||||||||||||||||
Sbjct: 1003581 ggccggacgcgacgccgtcaa 1003561

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    ggccctgacggcggccggacg 150
              |||||||||||||||||||||
Sbjct: 778368 ggccctgacggcggccggacg 778388

>gb|AC009118.11| Homo sapiens chromosome 16 clone RP11-481J2, complete sequence
          Length = 187988

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    attcccctctgcctgtccccc 78
             |||||||||||||||||||||
Sbjct: 52373 attcccctctgcctgtccccc 52393

>dbj|AB044947.1| Homo sapiens gene for NDRG4-B, NDRG4-Bvar, NDRG4-H, complete cds
          Length = 31217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    attcccctctgcctgtccccc 78
             |||||||||||||||||||||
Sbjct: 12971 attcccctctgcctgtccccc 12951

>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence
          Length = 198063

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 307    cgccatgccaagatccaactcaga 330
              |||||||||||||||||| |||||
Sbjct: 131379 cgccatgccaagatccaagtcaga 131402

>gb|BC002228.1| Mus musculus cDNA clone IMAGE:3491339, partial cds
          Length = 842

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 307 cgccatgccaagatccaactcaga 330
           |||||||||||||||||| |||||
Sbjct: 162 cgccatgccaagatccaagtcaga 185

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 336     atgatatcttctttgatgcattgg 359
               |||| |||||||||||||||||||
Sbjct: 2083972 atgagatcttctttgatgcattgg 2083949

>emb|AL391294.16| Human DNA sequence from clone RP11-196G4 on chromosome X Contains the 3'
              end of the NSBP1 gene for nucleosomal binding protein 1 and
              a CpG island, complete sequence
          Length = 152120

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    attcagaagaaattaagtgc 307
              ||||||||||||||||||||
Sbjct: 144166 attcagaagaaattaagtgc 144147

>emb|AL355352.16| Human DNA sequence from clone RP11-67K21 on chromosome 6, complete
             sequence
          Length = 169747

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 336   atgatatcttctttgatgcattgg 359
             ||||| ||||||||||||||||||
Sbjct: 83363 atgatttcttctttgatgcattgg 83386

>emb|Y15484.1|CFY15484 Canis familiaris gene encoding retinal guanylate cyclase E
          Length = 14515

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ctgcctgtcccccctcgaac 85
             ||||||||||||||||||||
Sbjct: 12826 ctgcctgtcccccctcgaac 12845

>dbj|AK136335.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:8030488N22 product:RIKEN cDNA
            5730460G06 gene, full insert sequence
          Length = 2574

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 307  cgccatgccaagatccaactcaga 330
            |||||||||||||||||| |||||
Sbjct: 1920 cgccatgccaagatccaagtcaga 1943

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 130     ggccctgacggcggccggacgcga 153
               |||||||||||||||||| |||||
Sbjct: 2817869 ggccctgacggcggccggccgcga 2817892

>dbj|AK041988.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630051B20 product:unclassifiable, full
           insert sequence
          Length = 3019

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 307 cgccatgccaagatccaactcaga 330
           |||||||||||||||||| |||||
Sbjct: 631 cgccatgccaagatccaagtcaga 654

>gb|AC006466.3|AC006466 Homo sapiens BAC clone CTA-471E18 from 7p11.2-p21, complete sequence
          Length = 156880

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   cccctctgcctgtcccccct 80
            ||||||||||||||||||||
Sbjct: 6622 cccctctgcctgtcccccct 6603

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    gccggccctgacggcggccg 146
              ||||||||||||||||||||
Sbjct: 611681 gccggccctgacggcggccg 611662


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,429,523
Number of Sequences: 3902068
Number of extensions: 2429523
Number of successful extensions: 49155
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48840
Number of HSP's gapped (non-prelim): 315
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)