>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 273    tgattccacatgatgagatacgcttcaaaataagttcaaaactt 316
              |||| ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 140927 tgataccacatgatgagatacgctgcaaaataagttcgaaactt 140970

>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 273   tgattccacatgatgagatacgcttcaaaataagttcaaaactt 316
             |||| ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 74927 tgataccacatgatgagatacgctgcaaaataagttcgaaactt 74970

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 273    tgattccacatgatgagatacgcttcaaaataagttcaaaactt 316
              |||| ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 140927 tgataccacatgatgagatacgctgcaaaataagttcgaaactt 140970

>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 273    tgattccacatgatgagatacgcttcaaaataagttcaaaactt 316
              |||| ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 121691 tgataccacatgatgagatacgctgcaaaataagttcgaaactt 121648

>ref|NM_197706.1| Oryza sativa (japonica cultivar-group) putative transcription
            regulatory protein (OSJNBa0010C11.3), mRNA
          Length = 7478

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                        
Query: 334  gttgcagttcagcaaaatcatgggggtggctctggataaggctatcaaagagataatact 393
            ||||||||  |||||||||||||   ||||| |||||||||| ||||||||||| |||  
Sbjct: 3804 gttgcagtatagcaaaatcatggatatggctttggataaggccatcaaagagattatagg 3863

                                          
Query: 394  cccggtcattgaaagaagtgtctcaatagc 423
             || |||||| ||||||||||  |||||||
Sbjct: 3864 tcctgtcattcaaagaagtgttacaatagc 3893

>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 360   tggctctggataaggctatcaaagagataatactcccggtcattgaaagaagtgtctcaa 419
             ||||| |||||||||| ||||||||||| |||   || |||||| ||||||||||  |||
Sbjct: 50333 tggctttggataaggccatcaaagagattataggtcctgtcattcaaagaagtgttacaa 50274

                 
Query: 420   tagc 423
             ||||
Sbjct: 50273 tagc 50270

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 360      tggctctggataaggctatcaaagagataatactcccggtcattgaaagaagtgtctcaa 419
                ||||| |||||||||| ||||||||||| |||   || |||||| ||||||||||  |||
Sbjct: 21375320 tggctttggataaggccatcaaagagattataggtcctgtcattcaaagaagtgttacaa 21375261

                    
Query: 420      tagc 423
                ||||
Sbjct: 21375260 tagc 21375257

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 360      tggctctggataaggctatcaaagagataatactcccggtcattgaaagaagtgtctcaa 419
                ||||| |||||||||| ||||||||||| |||   || |||||| ||||||||||  |||
Sbjct: 21386583 tggctttggataaggccatcaaagagattataggtcctgtcattcaaagaagtgttacaa 21386524

                    
Query: 420      tagc 423
                ||||
Sbjct: 21386523 tagc 21386520

>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete
              sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 404    gaaagaagtgtctcaatagca 424
              |||||||||||||||||||||
Sbjct: 172361 gaaagaagtgtctcaatagca 172341

>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone
             BACR02L12, complete sequence
          Length = 178931

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   atcactatcggcatcgccatcgcca 247
             |||||||||| ||||||||||||||
Sbjct: 40885 atcactatcgccatcgccatcgcca 40909

>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete
              sequence
          Length = 224856

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 223    atcactatcggcatcgccatcgcca 247
              |||||||||| ||||||||||||||
Sbjct: 174395 atcactatcgccatcgccatcgcca 174419

>gb|AE008919.1| Uncultured proteobacterium BAC EBAC000-65D09 complete sequence
          Length = 86564

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   aatcatgggggtggctctgg 368
             ||||||||||||||||||||
Sbjct: 81241 aatcatgggggtggctctgg 81260

>ref|XM_380527.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00351.1)
           partial mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 aaatcatgggggtggctctg 367
           ||||||||||||||||||||
Sbjct: 120 aaatcatgggggtggctctg 139

>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence
          Length = 208678

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    cactctctctcactcagctt 265
              ||||||||||||||||||||
Sbjct: 133338 cactctctctcactcagctt 133319

>gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, complete sequence
          Length = 207763

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    ttcagcaaaatcatgggggt 360
              ||||||||||||||||||||
Sbjct: 173513 ttcagcaaaatcatgggggt 173494

>emb|AL590408.15| Human DNA sequence from clone RP11-227F8 on chromosome 1 Contains the
             5' end of a novel gene (DKFZP586L151), a novel gene, the
             5' end of the gene for C-terminal PDZ domain ligand of
             neuronal nitric oxide synthase (CAPON) and two CpG
             islands, complete sequence
          Length = 103523

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 402   ttgaaagaagtgtctcaatagcaa 425
             ||||||| ||||||||||||||||
Sbjct: 13008 ttgaaagtagtgtctcaatagcaa 13031

>gb|AC131237.3| Homo sapiens 3 BAC RP11-47L11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 67309

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   cttcaaaataagttcaaaac 314
             ||||||||||||||||||||
Sbjct: 24037 cttcaaaataagttcaaaac 24018

>gb|AE005811.1| Caulobacter crescentus CB15 section 137 of 359 of the complete genome
          Length = 10363

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  tcggcatcgccatcgccact 249
            ||||||||||||||||||||
Sbjct: 7965 tcggcatcgccatcgccact 7984

>gb|AC117403.4| Homo sapiens 12 BAC RP11-239E14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 121632

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 313    acttttatctcttggctcacagtt 336
              ||||||||||||||| ||||||||
Sbjct: 114707 acttttatctcttggatcacagtt 114730

>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence
          Length = 216718

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    tttatctcttggctcacagt 335
              ||||||||||||||||||||
Sbjct: 104200 tttatctcttggctcacagt 104181

>gb|AC011648.12| Homo sapiens chromosome 15, clone RP11-15F13, complete sequence
          Length = 107336

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    tccacctatgctaaatcagt 98
             ||||||||||||||||||||
Sbjct: 28143 tccacctatgctaaatcagt 28162

>gb|AC155842.4| Mus musculus 6 BAC RP24-122N23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 177409

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   ctgttcgcctccctcctaacagta 131
             |||||||||||| |||||||||||
Sbjct: 27288 ctgttcgcctccgtcctaacagta 27311

>gb|AC007869.2|AC007869 Genomic Sequence for Homo sapiens Clone 431C18 From Chromosome 8 (locus
             D8S1741), complete sequence
          Length = 196905

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   tctcacaccttgacccaggt 198
             ||||||||||||||||||||
Sbjct: 55148 tctcacaccttgacccaggt 55167

>gb|AY108532.1| Zea mays PCO147609 mRNA sequence
          Length = 1032

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 atcggcatcgccatcgccac 248
           ||||||||||||||||||||
Sbjct: 682 atcggcatcgccatcgccac 663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,229,855
Number of Sequences: 3902068
Number of extensions: 4229855
Number of successful extensions: 77507
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77388
Number of HSP's gapped (non-prelim): 119
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)