ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13c02 |
|---|---|
| Clone Library Name | barley_pub |
>YNQA_CAEEL (Q21986) Hypothetical protein R13F6.10 in chromosome III| Length = 958 Score = 59.3 bits (142), Expect = 2e-09 Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Frame = +3 Query: 78 ERRVRPIWDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNA 257 ERR+RPI+D++DS+Q+K AL C +L KHP + A LKALTL R+ K +A Sbjct: 10 ERRLRPIYDSLDSQQFKKALSDCDKVLKKHPNTSAAKVLKALTLIRLEK-------LADA 62 Query: 258 KELLYSNNI--FHFDDLTL 308 E+L + ++ H D+LTL Sbjct: 63 TEILEALDVPGAHHDELTL 81
>NAT1_YEAST (P12945) N-terminal acetyltransferase 1 (EC 2.3.1.88)| (Amino-terminal, alpha-amino, acetyltransferase 1) Length = 853 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = +3 Query: 111 DSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNA 257 + +QYK +LKL ++L K + +LALK L L +G+ D+A + NA Sbjct: 31 EGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANA 79
>NARGL_HUMAN (Q6N069) NMDA receptor-regulated 1-like protein (NARG1-like| protein) Length = 864 Score = 33.1 bits (74), Expect = 0.16 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 111 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 236 + +QYK LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>Y4667_PSEAE (P42810) Hypothetical protein PA4667| Length = 590 Score = 32.3 bits (72), Expect = 0.28 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +3 Query: 153 LLAKHPTSPYALALKALTLERMGKPDEALTV 245 LL K+P + L KAL L++ G+PDEALT+ Sbjct: 194 LLKKYPNNGQLLFGKALLLQQDGRPDEALTL 224
>NARG1_MOUSE (Q80UM3) NMDA receptor-regulated protein 1 (N-terminal| aceyltransferase 1) (Tubedown-1 protein) Length = 865 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 111 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 236 + +QY+ LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>NARG1_PONPY (Q5R4J9) NMDA receptor-regulated protein 1| Length = 866 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 111 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 236 + +QY+ LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>NARG1_HUMAN (Q9BXJ9) NMDA receptor-regulated protein 1 (N-terminal| acetyltransferase) (Tubedown-1 protein) (Tbdn100) (Gastric cancer antigen Ga19) Length = 866 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 111 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 236 + +QY+ LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>NARGL_MOUSE (Q9DBB4) NMDA receptor-regulated 1-like protein (NARG1-like| protein) Length = 864 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +3 Query: 111 DSRQYKAALKLCTSLLA--KHPTSPYALALKALTLERMGKPDEA 236 + +QYK LK C +L+ K LA+K L L +GK +EA Sbjct: 22 EQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLILNCLGKREEA 65
>Y940_METJA (Q58350) Hypothetical protein MJ0940| Length = 318 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/86 (27%), Positives = 37/86 (43%) Frame = +3 Query: 114 SRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHF 293 S +Y LK C L++ P A +KA L ++G+ +EAL C+N L N Sbjct: 131 SGKYDELLKCCDRLISFAPNFIPAYIIKANMLRKLGRYEEAL-ACVNKVLELKEN----- 184 Query: 294 DDLTLSTLQIVFQRLERLDLXTSCYE 371 D + ++ R+ D YE Sbjct: 185 DTNAIYLKALILNRIGNCDEALKYYE 210
>EMIL1_MOUSE (Q99K41) EMILIN-1 precursor (Elastin microfibril interface-located| protein 1) (Elastin microfibril interfacer 1) Length = 1017 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -3 Query: 121 CRESTASQIGRTRRSGIP---PASPNLLAMSAGPHDLGLG 11 C E AS +G + +P P PNL SAG H GLG Sbjct: 131 CGEGPASVLGPAPSTPLPRPRPVRPNLSGSSAGSHLSGLG 170
>TTC19_HUMAN (Q6DKK2) Tetratricopeptide repeat protein 19 (TPR repeat protein| 19) Length = 380 Score = 29.6 bits (65), Expect = 1.8 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Frame = +3 Query: 117 RQYKAALKLCTSLLA-KHPTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHF 293 R Y+ AL++ + +HP + ++ A TL+ G+ DEA A +L + I H Sbjct: 258 RMYEKALQISEEIQGERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDL--ARQINHP 315 Query: 294 D-DLTLSTLQIVFQRLERLDLXTSCYEYA 377 + + LS L V ER Y+ A Sbjct: 316 ELHMVLSNLAAVLMHRERYTQAKEIYQEA 344
>TTC8_HUMAN (Q8TAM2) Tetratricopeptide repeat protein 8 (TPR repeat protein 8)| (Bardet-Biedl syndrome 8 protein) Length = 531 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +3 Query: 99 WDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDE 233 W R+++ LCT +L K P A LKA L M DE Sbjct: 12 WSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDE 56
>Y1345_METJA (Q58741) Hypothetical protein MJ1345| Length = 314 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +3 Query: 120 QYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKEL 266 +Y ALK+ +L K+P S A A K L R GK ++L NA ++ Sbjct: 128 EYDYALKIIDKILKKYPKSAIAWAEKGEILYREGKLKKSLECFDNALKI 176
>BCSC_PSEFL (P58937) Cellulose synthase operon protein C precursor| Length = 1279 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 153 LLAKHPTSPYALALKALTLERMGKPDEAL 239 +LA+HP P AL+ L + G+PDEAL Sbjct: 410 VLARHPGDPDALSGLINVLSQSGQPDEAL 438
>Y1380_NEIMA (P67535) UPF0250 protein NMA1380| Length = 91 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 143 LHLAPRQAPHLTLRPRSQGSYFG 211 LH QA H+T RP S+G+Y G Sbjct: 39 LHAPDTQAHHITTRPSSKGNYTG 61
>Y1218_NEIMB (P67536) UPF0250 protein NMB1218| Length = 91 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 143 LHLAPRQAPHLTLRPRSQGSYFG 211 LH QA H+T RP S+G+Y G Sbjct: 39 LHAPDTQAHHITTRPSSKGNYTG 61
>AFSR_STRCO (P25941) Regulatory protein afsR| Length = 993 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3 Query: 108 VDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKELL 269 +D + A+ T+L A HP L L L R G+ EAL V + + LL Sbjct: 190 LDQGCHAEAVSELTALTAAHPLRERLRELLMLALYRSGRQAEALAVYADTRRLL 243
>PMP21_CHLPN (Q9Z6U5) Probable outer membrane protein pmp21 precursor| (Polymorphic membrane protein 21) Length = 1609 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = -3 Query: 280 LFEYNSSLAFKQTVSASSGFPILSKVRALRARA*GEVGCLARSEVQSLSAALYC 119 L E S +AFKQ +A +G + + + + A GE+ ++EV++ A+YC Sbjct: 466 LNETISEVAFKQNTAALTGGALSANDKVIIANNFGEI-LFEQNEVRNHGGAIYC 518
>ADF_LILLO (P30175) Actin-depolymerizing factor (ADF)| Length = 139 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%) Frame = +3 Query: 192 LKALTLERMGKPDEA---LTVCLNAKELLYSNNIFHFDDLT 305 ++ +T+ER+G+P+E+ T CL E Y+ +F FD +T Sbjct: 38 VQQVTVERLGQPNESYDDFTECLPPNECRYA--VFDFDFVT 76
>Y263_METJA (O06917) Hypothetical protein MJ0263| Length = 320 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 108 VDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLN 254 ++ +++ AL+ L +P L KA LE +GK DEAL C+N Sbjct: 125 IEFGEFEKALEALDEFLKIYPNLTSILRQKASILEILGKLDEALD-CVN 172
>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)| Length = 824 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +3 Query: 168 PTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHFDD---LTLSTLQIVFQRL 338 P Y LA + L ++ + ++ L+ + K+ + + + F D TLS L V+ + Sbjct: 69 PQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLGHVYCKT 128 Query: 339 ERLDLXTSCYE 371 +RL + CY+ Sbjct: 129 DRLAKGSECYQ 139
>TAX_HTL1C (P14079) Protein Tax-1 (Trans-activating transcriptional regulatory| protein of HTLV-1) (Protein X-LOR) (Protein PX) Length = 353 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +3 Query: 51 KFGLAGGIPERRVRPIWDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALT 206 + L PE ++ WD +D R +AL+ L PT + LK LT Sbjct: 42 RHALLATCPEHQIT--WDPIDGRVIGSALQFLIPRLPSFPTQRTSKTLKVLT 91
>TAX_HTL1A (P03409) Protein Tax-1 (Trans-activating transcriptional regulatory| protein of HTLV-1) (Protein X-LOR) (Protein PX) Length = 353 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +3 Query: 51 KFGLAGGIPERRVRPIWDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALT 206 + L PE ++ WD +D R +AL+ L PT + LK LT Sbjct: 42 RHALLATCPEHQIT--WDPIDGRVIGSALQFLIPRLPSFPTQRTSKTLKVLT 91
>NANE_HAEIN (P71340) Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC| 5.1.3.9) (ManNAc-6-P epimerase) Length = 228 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 175 EVGCLARSEVQSLSAALYCRESTASQIGRTR---RSGIPPASPN 53 E+GCLA ++ +L LYC+ +G T G P P+ Sbjct: 124 EMGCLAMADCSNLEEGLYCKALGFDIVGSTMSGYTGGAVPEEPD 167
>UBP1_SCHPO (Q9USM5) Probable ubiquitin carboxyl-terminal hydrolase 1 (EC| 3.1.2.15) (Ubiquitin thioesterase 1) (Ubiquitin-specific processing protease 1) (Deubiquitinating enzyme 1) Length = 849 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 261 ELLYSNNIFHFDDLTLSTLQIVFQRLERLDLXTSCYEYAC 380 E ++ FH + +TL + F + E+LDL S Y C Sbjct: 677 EWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCPGC 716
>SKI3_YEAST (P17883) Superkiller 3 protein| Length = 1432 Score = 27.3 bits (59), Expect = 9.0 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 6/120 (5%) Frame = +3 Query: 45 ASKFGLAGGIPERRVRPIWDAVDSRQYKAALKLCTSLLA------KHPTSPYALALKALT 206 A++F A + E + + D R + KL T+ +A K P S +AL LT Sbjct: 1089 AAQFMYAKNVLENHIN---NGDDERDIETVEKLTTASIALEQFFKKSPDSQFALQCALLT 1145 Query: 207 LERMGKPDEALTVCLNAKELLYSNNIFHFDDLTLSTLQIVFQRLERLDLXTSCYEYACTN 386 LER+ + A + +L D+ L I+ + R+ L +E + N Sbjct: 1146 LERLHHYENANELANRLIGILEKKFEKTQDERELFNFAIIKGQFARIHLGLGNFELSIEN 1205
>SEP1_SCHPO (O43058) Forkhead protein sep1| Length = 663 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 1 PLKTLTLDREGPLTWPASSGSPAES 75 PL++ T PL+ PASS SP+ES Sbjct: 326 PLQSCTNSPSPPLSSPASSASPSES 350
>Y941_METJA (Q57711) Hypothetical protein MJ0941| Length = 338 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +3 Query: 120 QYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEAL 239 +Y+ AL L P AL LK + L+RMGK EAL Sbjct: 180 RYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREAL 219
>UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein ON the Y chromosome) (Male-specific histocompatibility antigen H-YDB) Length = 1212 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +3 Query: 195 KALTLERMGKPDEALTVCLNAKELLYSNNIFHFDDLTLSTL 317 K+LT + K + +C+NAK+ +SN+I+ + +S+L Sbjct: 540 KSLTSKTSRKDRDTSNICVNAKK--HSNHIYQISSVPISSL 578
>CAPP_SHEON (Q8EK30) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 881 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +3 Query: 153 LLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKE 263 L+AKHP A AL + + KP + LTV L KE Sbjct: 459 LIAKHP----AKALGSYVISMASKPSDVLTVLLLLKE 491 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,041,251 Number of Sequences: 219361 Number of extensions: 756214 Number of successful extensions: 2573 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2533 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2572 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
